RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 BCANQ96GW7 911 aa31.23■■■□□ 2.59
CCSER2-202ENST00000359979 RAPGEF6Q8TEU7 1601 aa31.23■■■□□ 2.59
CCSER2-202ENST00000359979 RPRD2Q5VT52 1461 aaKnown RBP31.22■■■□□ 2.59
CCSER2-202ENST00000359979 ANKRD30BQ9BXX2 1392 aa31.21■■■□□ 2.59
CCSER2-202ENST00000359979 L3MBTL2Q969R5 705 aa31.2■■■□□ 2.58
CCSER2-202ENST00000359979 CDK11AQ9UQ88 783 aaPredicted RBP31.18■■■□□ 2.58
CCSER2-202ENST00000359979 CNTLNQ9NXG0 1405 aa31.18■■■□□ 2.58
CCSER2-202ENST00000359979 GRIN2AQ12879 1464 aa31.17■■■□□ 2.58
CCSER2-202ENST00000359979 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
CCSER2-202ENST00000359979 NCOA1Q15788 1441 aa31.15■■■□□ 2.58
CCSER2-202ENST00000359979 TEX14Q8IWB6 1497 aa31.14■■■□□ 2.58
CCSER2-202ENST00000359979 ARID3CA6NKF2 412 aa31.14■■■□□ 2.58
CCSER2-202ENST00000359979 TROQ12816 1431 aaPredicted RBP31.09■■■□□ 2.57
CCSER2-202ENST00000359979 CCDC7Q96M83 1385 aa31.09■■■□□ 2.57
CCSER2-202ENST00000359979 HNRNPUQ00839 825 aaKnown RBP eCLIP31.07■■■□□ 2.56
CCSER2-202ENST00000359979 FOXD1Q16676 465 aa31.07■■■□□ 2.56
CCSER2-202ENST00000359979 ITSN2Q9NZM3 1697 aa31.06■■■□□ 2.56
CCSER2-202ENST00000359979 ZNF644Q9H582 1327 aaPredicted RBP31.05■■■□□ 2.56
CCSER2-202ENST00000359979 MAGI1Q96QZ7 1491 aaPredicted RBP31.03■■■□□ 2.56
CCSER2-202ENST00000359979 CAMSAP2Q08AD1 1489 aa31.02■■■□□ 2.56
CCSER2-202ENST00000359979 SPATA31E1Q6ZUB1 1445 aa31.02■■■□□ 2.56
CCSER2-202ENST00000359979 SLC4A1APQ9BWU0 796 aaKnown RBP31.02■■■□□ 2.56
CCSER2-202ENST00000359979 ADCY10Q96PN6 1610 aa31.02■■■□□ 2.56
CCSER2-202ENST00000359979 ADGBQ8N7X0 1667 aa31.01■■■□□ 2.55
CCSER2-202ENST00000359979 NBPF8Q3BBV2 869 aa31.01■■■□□ 2.55
CCSER2-202ENST00000359979 ADGRL2O95490 1459 aa31■■■□□ 2.55
CCSER2-202ENST00000359979 POLR1AO95602 1720 aaPredicted RBP30.99■■■□□ 2.55
CCSER2-202ENST00000359979 PZPP20742 1482 aa30.99■■■□□ 2.55
CCSER2-202ENST00000359979 PRG4Q92954 1404 aaPredicted RBP30.98■■■□□ 2.55
CCSER2-202ENST00000359979 C11orf95C9JLR9 678 aaPredicted RBP30.97■■■□□ 2.55
CCSER2-202ENST00000359979 PRKRIP1Q9H875 184 aaPredicted RBP30.97■■■□□ 2.55
CCSER2-202ENST00000359979 GPATCH8Q9UKJ3 1502 aaKnown RBP30.97■■■□□ 2.55
CCSER2-202ENST00000359979 CFDP1Q9UEE9 299 aaPredicted RBP30.94■■■□□ 2.54
CCSER2-202ENST00000359979 SYNJ2O15056 1496 aa30.94■■■□□ 2.54
CCSER2-202ENST00000359979 CROCC2H7BZ55 1655 aa30.94■■■□□ 2.54
CCSER2-202ENST00000359979 CEP170Q5SW79 1584 aa30.93■■■□□ 2.54
CCSER2-202ENST00000359979 ERICH6BQ5W0A0 696 aa30.91■■■□□ 2.54
CCSER2-202ENST00000359979 MBD5Q9P267 1494 aa30.91■■■□□ 2.54
CCSER2-202ENST00000359979 PLB1Q6P1J6 1458 aa30.9■■■□□ 2.54
CCSER2-202ENST00000359979 KIAA1107Q9UPP5 1409 aa30.89■■■□□ 2.54
CCSER2-202ENST00000359979 KIF7Q2M1P5 1343 aa30.88■■■□□ 2.53
CCSER2-202ENST00000359979 CARMIL2Q6F5E8 1435 aa30.88■■■□□ 2.53
CCSER2-202ENST00000359979 ANP32EQ9BTT0 268 aa30.88■■■□□ 2.53
CCSER2-202ENST00000359979 KIF14Q15058 1648 aa30.87■■■□□ 2.53
CCSER2-202ENST00000359979 ANKRD30AQ9BXX3 1397 aa30.85■■■□□ 2.53
CCSER2-202ENST00000359979 CHMP7Q8WUX9 453 aaPredicted RBP30.85■■■□□ 2.53
CCSER2-202ENST00000359979 RBM19Q9Y4C8 960 aaKnown RBP30.85■■■□□ 2.53
CCSER2-202ENST00000359979 CCDC184Q52MB2 194 aa30.84■■■□□ 2.53
CCSER2-202ENST00000359979 NUP160Q12769 1436 aa30.84■■■□□ 2.53
CCSER2-202ENST00000359979 ZBED9Q6R2W3 1325 aa30.8■■■□□ 2.52
CCSER2-202ENST00000359979 MRS2Q9HD23 443 aa30.8■■■□□ 2.52
CCSER2-202ENST00000359979 SHANK2Q9UPX8 1470 aa30.8■■■□□ 2.52
CCSER2-202ENST00000359979 ANKRD50Q9ULJ7 1429 aa30.76■■■□□ 2.51
CCSER2-202ENST00000359979 ARID4BQ4LE39 1312 aaPredicted RBP30.75■■■□□ 2.51
CCSER2-202ENST00000359979 JPH4Q96JJ6 628 aa30.75■■■□□ 2.51
CCSER2-202ENST00000359979 ABCA8O94911 1581 aa30.75■■■□□ 2.51
CCSER2-202ENST00000359979 ZNF777Q9ULD5 760 aaPredicted RBP30.73■■■□□ 2.51
CCSER2-202ENST00000359979 ABCC10Q5T3U5 1492 aa30.73■■■□□ 2.51
CCSER2-202ENST00000359979 PKD2Q13563 968 aa30.72■■■□□ 2.51
CCSER2-202ENST00000359979 FAM9BQ8IZU0 186 aa30.72■■■□□ 2.51
CCSER2-202ENST00000359979 UHRF1BP1Q6BDS2 1440 aa30.72■■■□□ 2.51
CCSER2-202ENST00000359979 USP47Q96K76 1375 aa30.71■■■□□ 2.51
CCSER2-202ENST00000359979 CDC42BPAQ5VT25 1732 aa30.71■■■□□ 2.51
CCSER2-202ENST00000359979 KDM5DQ9BY66 1539 aa30.7■■■□□ 2.51
CCSER2-202ENST00000359979 FBLN2P98095 1184 aa30.7■■■□□ 2.5
CCSER2-202ENST00000359979 PLEKHD1A6NEE1 506 aa30.69■■■□□ 2.5
CCSER2-202ENST00000359979 KDM5CP41229 1560 aa30.69■■■□□ 2.5
CCSER2-202ENST00000359979 DHX29Q7Z478 1369 aaKnown RBP30.68■■■□□ 2.5
CCSER2-202ENST00000359979 ARHGEF12Q9NZN5 1544 aa30.67■■■□□ 2.5
CCSER2-202ENST00000359979 PPP4R2Q9NY27 417 aa30.67■■■□□ 2.5
CCSER2-202ENST00000359979 C9orf84Q5VXU9 1444 aa30.67■■■□□ 2.5
CCSER2-202ENST00000359979 BCORL1Q5H9F3 1711 aa30.65■■■□□ 2.5
CCSER2-202ENST00000359979 ATP10BO94823 1461 aa30.65■■■□□ 2.5
CCSER2-202ENST00000359979 RALGAPBQ86X10 1494 aa30.65■■■□□ 2.5
CCSER2-202ENST00000359979 IRX6P78412 446 aaPredicted RBP30.64■■■□□ 2.5
CCSER2-202ENST00000359979 CHD1O14646 1710 aa30.62■■■□□ 2.49
CCSER2-202ENST00000359979 ROCK2O75116 1388 aaKnown RBP30.61■■■□□ 2.49
CCSER2-202ENST00000359979 NUP155O75694 1391 aa30.6■■■□□ 2.49
CCSER2-202ENST00000359979 ARHGEF5Q12774 1597 aa30.6■■■□□ 2.49
CCSER2-202ENST00000359979 PTPRGP23470 1445 aa30.58■■■□□ 2.49
CCSER2-202ENST00000359979 TSPY4P0CV99 314 aa30.56■■■□□ 2.48
CCSER2-202ENST00000359979 TSPY10P0CW01 314 aa30.56■■■□□ 2.48
CCSER2-202ENST00000359979 ZNF326Q5BKZ1 582 aaKnown RBP30.53■■■□□ 2.48
CCSER2-202ENST00000359979 SMG6Q86US8 1419 aaKnown RBP30.53■■■□□ 2.48
CCSER2-202ENST00000359979 FANCIQ9NVI1 1328 aa30.53■■■□□ 2.48
CCSER2-202ENST00000359979 KIF15Q9NS87 1388 aa30.51■■■□□ 2.47
CCSER2-202ENST00000359979 CARD11Q9BXL7 1154 aa30.46■■■□□ 2.47
CCSER2-202ENST00000359979 CCDC141Q6ZP82 1450 aa30.44■■■□□ 2.46
CCSER2-202ENST00000359979 RSPH4AQ5TD94 716 aa30.43■■■□□ 2.46
CCSER2-202ENST00000359979 KTN1Q86UP2 1357 aaKnown RBP30.43■■■□□ 2.46
CCSER2-202ENST00000359979 PREX2Q70Z35 1606 aa30.41■■■□□ 2.46
CCSER2-202ENST00000359979 POLR3GLQ9BT43 218 aa30.4■■■□□ 2.46
CCSER2-202ENST00000359979 NUDCQ9Y266 331 aa30.4■■■□□ 2.46
CCSER2-202ENST00000359979 SAMD9LQ8IVG5 1584 aa30.39■■■□□ 2.46
CCSER2-202ENST00000359979 HNRNPMP52272 730 aaKnown RBP eCLIP30.39■■■□□ 2.46
CCSER2-202ENST00000359979 RNF123Q5XPI4 1314 aa30.38■■■□□ 2.45
CCSER2-202ENST00000359979 FAM135AQ9P2D6 1515 aa30.38■■■□□ 2.45
CCSER2-202ENST00000359979 PNISRQ8TF01 805 aaKnown RBP30.37■■■□□ 2.45
CCSER2-202ENST00000359979 CDC42BPBQ9Y5S2 1711 aa30.36■■■□□ 2.45
CCSER2-202ENST00000359979 MSH5O43196 834 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms