RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 STK26Q9P289 416 aa20.85■□□□□ 0.93
LMBR1-202ENST00000359422 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
LMBR1-202ENST00000359422 NACADO15069 1562 aa20.85■□□□□ 0.93
LMBR1-202ENST00000359422 GOLGA6L4A6NEF3 574 aa20.84■□□□□ 0.93
LMBR1-202ENST00000359422 GOLGA2Q08379 1002 aa20.82■□□□□ 0.92
LMBR1-202ENST00000359422 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
LMBR1-202ENST00000359422 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
LMBR1-202ENST00000359422 SPRYD3Q8NCJ5 442 aa20.81■□□□□ 0.92
LMBR1-202ENST00000359422 RBM19Q9Y4C8 960 aaKnown RBP20.8■□□□□ 0.92
LMBR1-202ENST00000359422 APBB1O00213 710 aa20.8■□□□□ 0.92
LMBR1-202ENST00000359422 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
LMBR1-202ENST00000359422 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.92
LMBR1-202ENST00000359422 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
LMBR1-202ENST00000359422 RTF1Q92541 710 aaKnown RBP20.79■□□□□ 0.92
LMBR1-202ENST00000359422 KTN1Q86UP2 1357 aaKnown RBP20.79■□□□□ 0.92
LMBR1-202ENST00000359422 NRDCO43847 1150 aa20.77■□□□□ 0.92
LMBR1-202ENST00000359422 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
LMBR1-202ENST00000359422 IPO8O15397 1037 aaKnown RBP20.76■□□□□ 0.91
LMBR1-202ENST00000359422 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
LMBR1-202ENST00000359422 HDGFL2Q7Z4V5 671 aaPredicted RBP20.75■□□□□ 0.91
LMBR1-202ENST00000359422 MCCP23508 829 aa20.75■□□□□ 0.91
LMBR1-202ENST00000359422 TRHP20396 242 aaPredicted RBP20.74■□□□□ 0.91
LMBR1-202ENST00000359422 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
LMBR1-202ENST00000359422 NUP155O75694 1391 aa20.73■□□□□ 0.91
LMBR1-202ENST00000359422 GOLGA6L6A8MZA4 724 aa20.73■□□□□ 0.91
LMBR1-202ENST00000359422 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
LMBR1-202ENST00000359422 RALBP1Q15311 655 aa20.7■□□□□ 0.9
LMBR1-202ENST00000359422 EFCAB2Q5VUJ9 269 aa20.69■□□□□ 0.9
LMBR1-202ENST00000359422 ROCK2O75116 1388 aaKnown RBP20.68■□□□□ 0.9
LMBR1-202ENST00000359422 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
LMBR1-202ENST00000359422 DEKP35659 375 aaKnown RBP20.67■□□□□ 0.9
LMBR1-202ENST00000359422 RWDD1Q9H446 243 aaPredicted RBP20.67■□□□□ 0.9
LMBR1-202ENST00000359422 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
LMBR1-202ENST00000359422 KIAA1211Q6ZU35 1233 aa20.66■□□□□ 0.9
LMBR1-202ENST00000359422 ITPRIPQ8IWB1 547 aa20.66■□□□□ 0.9
LMBR1-202ENST00000359422 L1TD1Q5T7N2 865 aaKnown RBP20.65■□□□□ 0.9
LMBR1-202ENST00000359422 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
LMBR1-202ENST00000359422 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
LMBR1-202ENST00000359422 SLKQ9H2G2 1235 aaPredicted RBP20.65■□□□□ 0.9
LMBR1-202ENST00000359422 CALD1Q05682 793 aaKnown RBP20.65■□□□□ 0.9
LMBR1-202ENST00000359422 MSNP26038 577 aaKnown RBP20.63■□□□□ 0.89
LMBR1-202ENST00000359422 CARMIL2Q6F5E8 1435 aa20.63■□□□□ 0.89
LMBR1-202ENST00000359422 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
LMBR1-202ENST00000359422 CHAF1AQ13111 956 aaPredicted RBP20.62■□□□□ 0.89
LMBR1-202ENST00000359422 KIF3BO15066 747 aa20.62■□□□□ 0.89
LMBR1-202ENST00000359422 ANKRD30AQ9BXX3 1397 aa20.61■□□□□ 0.89
LMBR1-202ENST00000359422 ZNF330Q9Y3S2 320 aaPredicted RBP20.61■□□□□ 0.89
LMBR1-202ENST00000359422 CLUAP1Q96AJ1 413 aa20.6■□□□□ 0.89
LMBR1-202ENST00000359422 DRC7Q8IY82 874 aa20.6■□□□□ 0.89
LMBR1-202ENST00000359422 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
LMBR1-202ENST00000359422 GZF1Q9H116 711 aaPredicted RBP20.58■□□□□ 0.89
LMBR1-202ENST00000359422 ISY1Q9ULR0 285 aaKnown RBP20.58■□□□□ 0.89
LMBR1-202ENST00000359422 FMN1Q68DA7 1419 aa20.58■□□□□ 0.88
LMBR1-202ENST00000359422 NLRP13Q86W25 1043 aa20.58■□□□□ 0.88
LMBR1-202ENST00000359422 GBP4Q96PP9 640 aa20.58■□□□□ 0.88
LMBR1-202ENST00000359422 SMC4Q9NTJ3 1288 aa20.57■□□□□ 0.88
LMBR1-202ENST00000359422 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
LMBR1-202ENST00000359422 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
LMBR1-202ENST00000359422 GNL2Q13823 731 aaKnown RBP20.56■□□□□ 0.88
LMBR1-202ENST00000359422 HNRNPMP52272 730 aaKnown RBP eCLIP20.55■□□□□ 0.881e-6■■■■■ 29.3
LMBR1-202ENST00000359422 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
LMBR1-202ENST00000359422 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
LMBR1-202ENST00000359422 CCDC146Q8IYE0 955 aa20.53■□□□□ 0.88
LMBR1-202ENST00000359422 PMFBP1Q8TBY8 1022 aa20.52■□□□□ 0.88
LMBR1-202ENST00000359422 MFAP1P55081 439 aaKnown RBP20.52■□□□□ 0.88
LMBR1-202ENST00000359422 CHMP4AQ9BY43 222 aa20.52■□□□□ 0.88
LMBR1-202ENST00000359422 NUTM2DQ5VT03 806 aaPredicted RBP20.51■□□□□ 0.87
LMBR1-202ENST00000359422 SPAG9O60271 1321 aaKnown RBP20.51■□□□□ 0.87
LMBR1-202ENST00000359422 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
LMBR1-202ENST00000359422 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
LMBR1-202ENST00000359422 PDE3BQ13370 1112 aa20.48■□□□□ 0.87
LMBR1-202ENST00000359422 HMMRO75330 724 aa20.47■□□□□ 0.87
LMBR1-202ENST00000359422 EIF3AQ14152 1382 aaKnown RBP20.47■□□□□ 0.87
LMBR1-202ENST00000359422 CENPJQ9HC77 1338 aaPredicted RBP20.47■□□□□ 0.87
LMBR1-202ENST00000359422 TRIM6-TRIM34B2RNG4 842 aa20.47■□□□□ 0.87
LMBR1-202ENST00000359422 GORABQ5T7V8 394 aa20.47■□□□□ 0.87
LMBR1-202ENST00000359422 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
LMBR1-202ENST00000359422 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 CLSTN1O94985 981 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
LMBR1-202ENST00000359422 KIAA2012Q0VF49 1180 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 RSPH4AQ5TD94 716 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
LMBR1-202ENST00000359422 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
LMBR1-202ENST00000359422 HDAC5Q9UQL6 1122 aa20.44■□□□□ 0.86
LMBR1-202ENST00000359422 IPO9Q96P70 1041 aaKnown RBP20.43■□□□□ 0.86
LMBR1-202ENST00000359422 PTMSP20962 102 aa20.42■□□□□ 0.86
LMBR1-202ENST00000359422 HTATSF1O43719 755 aaKnown RBP20.42■□□□□ 0.86
LMBR1-202ENST00000359422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■■■□□ 17.4
LMBR1-202ENST00000359422 FHOD3Q2V2M9 1422 aa20.41■□□□□ 0.86
LMBR1-202ENST00000359422 AMPHP49418 695 aa20.41■□□□□ 0.86
LMBR1-202ENST00000359422 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
LMBR1-202ENST00000359422 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
LMBR1-202ENST00000359422 SYAP1Q96A49 352 aaPredicted RBP20.4■□□□□ 0.86
LMBR1-202ENST00000359422 TAF7LQ5H9L4 462 aa20.4■□□□□ 0.86
LMBR1-202ENST00000359422 LMOD3Q0VAK6 560 aa20.39■□□□□ 0.85
LMBR1-202ENST00000359422 NOL8Q76FK4 1167 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms