RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 TAF3Q5VWG9 929 aa8.85□□□□□ -0.99
NF1-202ENST00000358273 HSCBQ8IWL3 235 aa8.85□□□□□ -0.99
NF1-202ENST00000358273 TNIKQ9UKE5 1360 aa8.85□□□□□ -0.99
NF1-202ENST00000358273 PDCL3Q9H2J4 239 aa8.84□□□□□ -0.99
NF1-202ENST00000358273 DDX11L8A8MPP1 907 aa8.84□□□□□ -1
NF1-202ENST00000358273 MS4A1P11836 297 aa8.83□□□□□ -1
NF1-202ENST00000358273 KIAA2012Q0VF49 1180 aa8.83□□□□□ -1
NF1-202ENST00000358273 AAMPQ13685 434 aa8.83□□□□□ -1
NF1-202ENST00000358273 DHX57Q6P158 1386 aaKnown RBP8.83□□□□□ -1
NF1-202ENST00000358273 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
NF1-202ENST00000358273 AKNAQ7Z591 1439 aa8.82□□□□□ -1
NF1-202ENST00000358273 DRC7Q8IY82 874 aa8.82□□□□□ -1
NF1-202ENST00000358273 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
NF1-202ENST00000358273 GBP4Q96PP9 640 aa8.82□□□□□ -1
NF1-202ENST00000358273 AK9Q5TCS8 1911 aa8.81□□□□□ -1
NF1-202ENST00000358273 TNNT1P13805 278 aa8.81□□□□□ -1
NF1-202ENST00000358273 WASHC2AQ641Q2 1341 aa8.81□□□□□ -1
NF1-202ENST00000358273 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
NF1-202ENST00000358273 ABCC8Q09428 1581 aa8.81□□□□□ -1
NF1-202ENST00000358273 VGLL3A8MV65 326 aa8.8□□□□□ -1
NF1-202ENST00000358273 UQCRHLA0A096LP55 91 aa8.8□□□□□ -1
NF1-202ENST00000358273 UQCRHP07919 91 aa8.8□□□□□ -1
NF1-202ENST00000358273 KTN1Q86UP2 1357 aaKnown RBP8.79□□□□□ -1
NF1-202ENST00000358273 R3HCC1Q9Y3T6 440 aaKnown RBP8.79□□□□□ -1
NF1-202ENST00000358273 NUDCQ9Y266 331 aa8.79□□□□□ -1
NF1-202ENST00000358273 VPS8Q8N3P4 1428 aa8.79□□□□□ -1
NF1-202ENST00000358273 CGNQ9P2M7 1197 aaKnown RBP8.79□□□□□ -1
NF1-202ENST00000358273 POGKQ9P215 609 aa8.78□□□□□ -1
NF1-202ENST00000358273 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
NF1-202ENST00000358273 IRX3P78415 501 aaPredicted RBP8.78□□□□□ -1
NF1-202ENST00000358273 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -1
NF1-202ENST00000358273 ESPNB1AK53 854 aa8.77□□□□□ -1
NF1-202ENST00000358273 WDR97A6NE52 1622 aa8.77□□□□□ -1
NF1-202ENST00000358273 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
NF1-202ENST00000358273 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
NF1-202ENST00000358273 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
NF1-202ENST00000358273 DHX37Q8IY37 1157 aaKnown RBP8.77□□□□□ -1.01
NF1-202ENST00000358273 RCAN3Q9UKA8 241 aa8.76□□□□□ -1.01
NF1-202ENST00000358273 CEP164Q9UPV0 1460 aa8.76□□□□□ -1.01
NF1-202ENST00000358273 MRE11P49959 708 aa8.76□□□□□ -1.01
NF1-202ENST00000358273 TRERF1Q96PN7 1200 aa8.76□□□□□ -1.01
NF1-202ENST00000358273 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
NF1-202ENST00000358273 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
NF1-202ENST00000358273 CCDC66A2RUB6 948 aa8.75□□□□□ -1.01
NF1-202ENST00000358273 CCNB3Q8WWL7 1395 aa8.75□□□□□ -1.01
NF1-202ENST00000358273 WDR43Q15061 677 aaKnown RBP eCLIP8.75□□□□□ -1.01
NF1-202ENST00000358273 NASPP49321 788 aaPredicted RBP8.75□□□□□ -1.01
NF1-202ENST00000358273 WASHC2CQ9Y4E1 1318 aa8.75□□□□□ -1.01
NF1-202ENST00000358273 MICAL3Q7RTP6 2002 aa8.74□□□□□ -1.01
NF1-202ENST00000358273 ERICH4A6NGS2 130 aa8.74□□□□□ -1.01
NF1-202ENST00000358273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.74□□□□□ -1.01
NF1-202ENST00000358273 KLHL34Q8N239 644 aa8.74□□□□□ -1.01
NF1-202ENST00000358273 ZFP91Q96JP5 570 aaPredicted RBP8.74□□□□□ -1.01
NF1-202ENST00000358273 EXOC6Q8TAG9 804 aa8.73□□□□□ -1.01
NF1-202ENST00000358273 RSF1Q96T23 1441 aaPredicted RBP8.73□□□□□ -1.01
NF1-202ENST00000358273 RRP1P56182 461 aaKnown RBP8.73□□□□□ -1.01
NF1-202ENST00000358273 GOLGA6L6A8MZA4 724 aa8.73□□□□□ -1.01
NF1-202ENST00000358273 PEG3Q9GZU2 1588 aa8.73□□□□□ -1.01
NF1-202ENST00000358273 SETD5Q9C0A6 1442 aa8.73□□□□□ -1.01
NF1-202ENST00000358273 RAB3GAP2Q9H2M9 1393 aa8.73□□□□□ -1.01
NF1-202ENST00000358273 IPO4Q8TEX9 1081 aaKnown RBP8.72□□□□□ -1.01
NF1-202ENST00000358273 TULP1O00294 542 aaPredicted RBP8.72□□□□□ -1.01
NF1-202ENST00000358273 P3H3Q8IVL6 736 aa8.71□□□□□ -1.01
NF1-202ENST00000358273 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
NF1-202ENST00000358273 BACH2Q9BYV9 841 aa8.71□□□□□ -1.02
NF1-202ENST00000358273 CCDC173Q0VFZ6 552 aa8.7□□□□□ -1.02
NF1-202ENST00000358273 GPATCH11Q8N954 259 aa8.7□□□□□ -1.02
NF1-202ENST00000358273 SKOR2Q2VWA4 1001 aaPredicted RBP8.7□□□□□ -1.02
NF1-202ENST00000358273 C14orf37Q86TY3 774 aa8.7□□□□□ -1.02
NF1-202ENST00000358273 PPP4R3BQ5MIZ7 849 aa8.69□□□□□ -1.02
NF1-202ENST00000358273 CLCN1P35523 988 aa8.69□□□□□ -1.02
NF1-202ENST00000358273 SMAP1Q8IYB5 467 aaPredicted RBP8.69□□□□□ -1.02
NF1-202ENST00000358273 CCDC39Q9UFE4 941 aa8.69□□□□□ -1.02
NF1-202ENST00000358273 GOLGA6L1Q8N7Z2 621 aa8.69□□□□□ -1.02
NF1-202ENST00000358273 RRAGDQ9NQL2 400 aaPredicted RBP8.69□□□□□ -1.02
NF1-202ENST00000358273 DCAF11Q8TEB1 546 aa8.68□□□□□ -1.02
NF1-202ENST00000358273 CCDC94Q9BW85 323 aaPredicted RBP8.68□□□□□ -1.02
NF1-202ENST00000358273 ZNF592Q92610 1267 aa8.68□□□□□ -1.02
NF1-202ENST00000358273 GRPEL1Q9HAV7 217 aa8.67□□□□□ -1.02
NF1-202ENST00000358273 SOGA1O94964 1423 aa8.67□□□□□ -1.02
NF1-202ENST00000358273 HSPA5P11021 654 aaKnown RBP8.67□□□□□ -1.02
NF1-202ENST00000358273 SETQ01105 290 aaPredicted RBP8.67□□□□□ -1.02
NF1-202ENST00000358273 MPNDQ8N594 471 aa8.67□□□□□ -1.02
NF1-202ENST00000358273 IBSPP21815 317 aaPredicted RBP8.67□□□□□ -1.02
NF1-202ENST00000358273 KCNJ4P48050 445 aa8.67□□□□□ -1.02
NF1-202ENST00000358273 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
NF1-202ENST00000358273 SMG6Q86US8 1419 aaKnown RBP8.67□□□□□ -1.02
NF1-202ENST00000358273 CNTLNQ9NXG0 1405 aa8.67□□□□□ -1.02
NF1-202ENST00000358273 CENPQQ7L2Z9 268 aaPredicted RBP8.67□□□□□ -1.02
NF1-202ENST00000358273 ZSCAN30Q86W11 494 aa8.67□□□□□ -1.02
NF1-202ENST00000358273 TSPYL1Q9H0U9 437 aa8.67□□□□□ -1.02
NF1-202ENST00000358273 CBX1P83916 185 aa8.66□□□□□ -1.02
NF1-202ENST00000358273 LETM1O95202 739 aaPredicted RBP8.66□□□□□ -1.02
NF1-202ENST00000358273 SKIDA1Q1XH10 827 aa8.66□□□□□ -1.02
NF1-202ENST00000358273 CFAP44Q96MT7 982 aa8.66□□□□□ -1.02
NF1-202ENST00000358273 SYAP1Q96A49 352 aaPredicted RBP8.65□□□□□ -1.02
NF1-202ENST00000358273 FTSJ3Q8IY81 847 aaKnown RBP8.65□□□□□ -1.02
NF1-202ENST00000358273 NOM1Q5C9Z4 860 aaKnown RBP8.65□□□□□ -1.02
NF1-202ENST00000358273 DYNC1I1O14576 645 aa8.65□□□□□ -1.03
NF1-202ENST00000358273 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms