RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
SYNE2-203ENST00000357395 INCENPQ9NQS7 918 aa5.86□□□□□ -1.47
SYNE2-203ENST00000357395 HSP90B1P14625 803 aaKnown RBP5.85□□□□□ -1.47
SYNE2-203ENST00000357395 DCTN1Q14203 1278 aa5.85□□□□□ -1.47
SYNE2-203ENST00000357395 FAM43AQ8N2R8 423 aa5.85□□□□□ -1.47
SYNE2-203ENST00000357395 PODXL2Q9NZ53 605 aa5.85□□□□□ -1.47
SYNE2-203ENST00000357395 TAF7LQ5H9L4 462 aa5.85□□□□□ -1.47
SYNE2-203ENST00000357395 KTN1Q86UP2 1357 aaKnown RBP5.85□□□□□ -1.47
SYNE2-203ENST00000357395 AEBP1Q8IUX7 1158 aa5.85□□□□□ -1.47
SYNE2-203ENST00000357395 HDAC5Q9UQL6 1122 aa5.85□□□□□ -1.47
SYNE2-203ENST00000357395 CHMP3Q9Y3E7 222 aa5.85□□□□□ -1.47
SYNE2-203ENST00000357395 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-203ENST00000357395 WDR43Q15061 677 aaKnown RBP eCLIP5.84□□□□□ -1.47
SYNE2-203ENST00000357395 VSIG10Q8N0Z9 540 aa5.84□□□□□ -1.47
SYNE2-203ENST00000357395 RNF20Q5VTR2 975 aa5.84□□□□□ -1.47
SYNE2-203ENST00000357395 RSF1Q96T23 1441 aaPredicted RBP5.84□□□□□ -1.48
SYNE2-203ENST00000357395 TUBB4BP68371 445 aa5.84□□□□□ -1.48
SYNE2-203ENST00000357395 ERCC4Q92889 916 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-203ENST00000357395 MCM5P33992 734 aa5.83□□□□□ -1.48
SYNE2-203ENST00000357395 MRE11P49959 708 aa5.83□□□□□ -1.48
SYNE2-203ENST00000357395 MNS1Q8NEH6 495 aa5.83□□□□□ -1.48
SYNE2-203ENST00000357395 AMER1Q5JTC6 1135 aaPredicted RBP5.82□□□□□ -1.48
SYNE2-203ENST00000357395 TPM1P09493 284 aa5.82□□□□□ -1.48
SYNE2-203ENST00000357395 DEF6Q9H4E7 631 aa5.82□□□□□ -1.48
SYNE2-203ENST00000357395 KLHL34Q8N239 644 aa5.82□□□□□ -1.48
SYNE2-203ENST00000357395 GOLGA6L7A0A1B0GV03 622 aa5.82□□□□□ -1.48
SYNE2-203ENST00000357395 ZRSR2Q15696 482 aaKnown RBP5.82□□□□□ -1.48
SYNE2-203ENST00000357395 FAM9BQ8IZU0 186 aa5.82□□□□□ -1.48
SYNE2-203ENST00000357395 AK7Q96M32 723 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 EIF4G2P78344 907 aaKnown RBP eCLIP5.81□□□□□ -1.48
SYNE2-203ENST00000357395 CCDC191Q8NCU4 936 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 MRS2Q9HD23 443 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 RDXP35241 583 aaKnown RBP5.81□□□□□ -1.48
SYNE2-203ENST00000357395 GSE1Q14687 1217 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 GBP2P32456 591 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-203ENST00000357395 MYO6Q9UM54 1294 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 ZNF526Q8TF50 670 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-203ENST00000357395 WWC1Q8IX03 1113 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 GOLGA6L10A0A0M3HER8 536 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 FAM193AP78312 1265 aa5.81□□□□□ -1.48
SYNE2-203ENST00000357395 EIF3AQ14152 1382 aaKnown RBP5.81□□□□□ -1.48
SYNE2-203ENST00000357395 TUBB4AP04350 444 aa5.8□□□□□ -1.48
SYNE2-203ENST00000357395 LETM1O95202 739 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-203ENST00000357395 FBXO3Q9UK99 471 aa5.8□□□□□ -1.48
SYNE2-203ENST00000357395 KIF2AO00139 706 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-203ENST00000357395 GOLGA6L10A6NI86 522 aa5.8□□□□□ -1.48
SYNE2-203ENST00000357395 NAP1L2Q9ULW6 460 aaPredicted RBP5.79□□□□□ -1.48
SYNE2-203ENST00000357395 DDX11Q96FC9 970 aa5.79□□□□□ -1.48
SYNE2-203ENST00000357395 CLIP1P30622 1438 aa5.79□□□□□ -1.48
SYNE2-203ENST00000357395 HSP90B2PQ58FF3 399 aa5.79□□□□□ -1.48
SYNE2-203ENST00000357395 ST18O60284 1047 aa5.79□□□□□ -1.48
SYNE2-203ENST00000357395 NEXNQ0ZGT2 675 aa5.79□□□□□ -1.48
SYNE2-203ENST00000357395 HSP90AB1P08238 724 aaKnown RBP5.79□□□□□ -1.48
SYNE2-203ENST00000357395 A6NNZ2 444 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 TUBB8Q3ZCM7 444 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 FAM184AQ8NB25 1140 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 IPO8O15397 1037 aaKnown RBP5.78□□□□□ -1.48
SYNE2-203ENST00000357395 RALBP1Q15311 655 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 CLGNO14967 610 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 TXLNBQ8N3L3 684 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 PDCL3Q9H2J4 239 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 NCBP3Q53F19 620 aaKnown RBP5.78□□□□□ -1.48
SYNE2-203ENST00000357395 CCDC39Q9UFE4 941 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 FYB1O15117 783 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 CALCOCO1Q9P1Z2 691 aa5.78□□□□□ -1.48
SYNE2-203ENST00000357395 KIF7Q2M1P5 1343 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 CC2D1BQ5T0F9 858 aaKnown RBP5.77□□□□□ -1.49
SYNE2-203ENST00000357395 HIRIP3Q9BW71 556 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-203ENST00000357395 LUZP1Q86V48 1076 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 FTSJ3Q8IY81 847 aaKnown RBP5.77□□□□□ -1.49
SYNE2-203ENST00000357395 CEP162Q5TB80 1403 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 PLEKHG5O94827 1062 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 MCM3P25205 808 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 CFAP53Q96M91 514 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 SLC4A1APQ9BWU0 796 aaKnown RBP5.77□□□□□ -1.49
SYNE2-203ENST00000357395 PMFBP1Q8TBY8 1022 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 SWAP70Q9UH65 585 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 PAIP2Q9BPZ3 127 aaKnown RBP5.77□□□□□ -1.49
SYNE2-203ENST00000357395 CCDC173Q0VFZ6 552 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 NINLQ9Y2I6 1382 aa5.77□□□□□ -1.49
SYNE2-203ENST00000357395 SARNPP82979 210 aaKnown RBP5.76□□□□□ -1.49
SYNE2-203ENST00000357395 TMX4Q9H1E5 349 aaPredicted RBP5.76□□□□□ -1.49
SYNE2-203ENST00000357395 DNAJC2Q99543 621 aaKnown RBP5.76□□□□□ -1.49
SYNE2-203ENST00000357395 IRX6P78412 446 aaPredicted RBP5.76□□□□□ -1.49
SYNE2-203ENST00000357395 KNSTRNQ9Y448 316 aa5.76□□□□□ -1.49
SYNE2-203ENST00000357395 CLSTN1O94985 981 aa5.76□□□□□ -1.49
SYNE2-203ENST00000357395 TUBBP07437 444 aa5.76□□□□□ -1.49
SYNE2-203ENST00000357395 LEKR1Q6ZMV7 388 aa5.76□□□□□ -1.49
SYNE2-203ENST00000357395 CAVIN2O95810 425 aa5.76□□□□□ -1.49
SYNE2-203ENST00000357395 TERF1P54274 439 aa5.75□□□□□ -1.49
SYNE2-203ENST00000357395 NUCB2P80303 420 aa5.75□□□□□ -1.49
SYNE2-203ENST00000357395 NF2P35240 595 aa5.75□□□□□ -1.49
SYNE2-203ENST00000357395 KIAA1211Q6ZU35 1233 aa5.75□□□□□ -1.49
SYNE2-203ENST00000357395 B4GALNT3Q6L9W6 998 aa5.75□□□□□ -1.49
SYNE2-203ENST00000357395 PRPF40AO75400 957 aaKnown RBP5.75□□□□□ -1.49
SYNE2-203ENST00000357395 MTUS2Q5JR59 1369 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 MCM2P49736 904 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 FEZ1Q99689 392 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 GOLGA3Q08378 1498 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 MBD3O95983 291 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms