RNA–Protein interactions for RNA: ENST00000357327.9

TNIK-203, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-203ENST00000357327 RRP7BPQ9NSQ0 103 aa12.49□□□□□ -0.41
TNIK-203ENST00000357327 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
TNIK-203ENST00000357327 L3MBTL2Q969R5 705 aa12.49□□□□□ -0.41
TNIK-203ENST00000357327 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
TNIK-203ENST00000357327 ANP32BQ92688 251 aaKnown RBP12.48□□□□□ -0.41
TNIK-203ENST00000357327 FBLN2P98095 1184 aa12.47□□□□□ -0.41
TNIK-203ENST00000357327 RGS3P49796 1198 aa12.46□□□□□ -0.41
TNIK-203ENST00000357327 MAP3K1Q13233 1512 aa12.45□□□□□ -0.42
TNIK-203ENST00000357327 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
TNIK-203ENST00000357327 TIAM1Q13009 1591 aa12.45□□□□□ -0.42
TNIK-203ENST00000357327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■■■■□ 22.3
TNIK-203ENST00000357327 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
TNIK-203ENST00000357327 RALBP1Q15311 655 aa12.43□□□□□ -0.42
TNIK-203ENST00000357327 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
TNIK-203ENST00000357327 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
TNIK-203ENST00000357327 MPHOSPH9Q99550 1183 aa12.41□□□□□ -0.42
TNIK-203ENST00000357327 CRBNQ96SW2 442 aa12.41□□□□□ -0.42
TNIK-203ENST00000357327 MYH16Q9H6N6 1097 aa12.41□□□□□ -0.42
TNIK-203ENST00000357327 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
TNIK-203ENST00000357327 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
TNIK-203ENST00000357327 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
TNIK-203ENST00000357327 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
TNIK-203ENST00000357327 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
TNIK-203ENST00000357327 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
TNIK-203ENST00000357327 HFM1A2PYH4 1435 aa12.39□□□□□ -0.43
TNIK-203ENST00000357327 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
TNIK-203ENST00000357327 MYBBP1AQ9BQG0 1328 aaKnown RBP12.38□□□□□ -0.43
TNIK-203ENST00000357327 PLIN1O60240 522 aa12.37□□□□□ -0.43
TNIK-203ENST00000357327 CANXP27824 592 aaKnown RBP12.37□□□□□ -0.43
TNIK-203ENST00000357327 FGD6Q6ZV73 1430 aa12.37□□□□□ -0.43
TNIK-203ENST00000357327 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
TNIK-203ENST00000357327 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
TNIK-203ENST00000357327 TPM2P07951 284 aa12.37□□□□□ -0.43
TNIK-203ENST00000357327 KIF15Q9NS87 1388 aa12.36□□□□□ -0.43
TNIK-203ENST00000357327 CLCN1P35523 988 aa12.36□□□□□ -0.43
TNIK-203ENST00000357327 DCAF11Q8TEB1 546 aa12.36□□□□□ -0.43
TNIK-203ENST00000357327 POGKQ9P215 609 aa12.36□□□□□ -0.43
TNIK-203ENST00000357327 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
TNIK-203ENST00000357327 RRAGDQ9NQL2 400 aaPredicted RBP12.35□□□□□ -0.43
TNIK-203ENST00000357327 TOP2BQ02880 1626 aa12.35□□□□□ -0.43
TNIK-203ENST00000357327 NLRP13Q86W25 1043 aa12.35□□□□□ -0.43
TNIK-203ENST00000357327 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
TNIK-203ENST00000357327 TNNT2P45379 298 aaPredicted RBP12.34□□□□□ -0.43
TNIK-203ENST00000357327 MRE11P49959 708 aa12.34□□□□□ -0.43
TNIK-203ENST00000357327 FOXD1Q16676 465 aa12.33□□□□□ -0.44
TNIK-203ENST00000357327 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
TNIK-203ENST00000357327 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
TNIK-203ENST00000357327 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
TNIK-203ENST00000357327 PDCL3Q9H2J4 239 aa12.31□□□□□ -0.44
TNIK-203ENST00000357327 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
TNIK-203ENST00000357327 MSNP26038 577 aaKnown RBP12.3□□□□□ -0.44
TNIK-203ENST00000357327 NAIPQ13075 1403 aa12.29□□□□□ -0.44
TNIK-203ENST00000357327 ESPNB1AK53 854 aa12.29□□□□□ -0.44
TNIK-203ENST00000357327 MAP7D2Q96T17 732 aa12.29□□□□□ -0.44
TNIK-203ENST00000357327 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
TNIK-203ENST00000357327 USP47Q96K76 1375 aa12.28□□□□□ -0.44
TNIK-203ENST00000357327 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
TNIK-203ENST00000357327 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.44
TNIK-203ENST00000357327 DDX11L8A8MPP1 907 aa12.27□□□□□ -0.44
TNIK-203ENST00000357327 SKAP1Q86WV1 359 aa12.27□□□□□ -0.44
TNIK-203ENST00000357327 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.44
TNIK-203ENST00000357327 FHOD3Q2V2M9 1422 aa12.27□□□□□ -0.45
TNIK-203ENST00000357327 CDCA7LQ96GN5 454 aa12.27□□□□□ -0.45
TNIK-203ENST00000357327 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
TNIK-203ENST00000357327 PTMSP20962 102 aa12.26□□□□□ -0.45
TNIK-203ENST00000357327 SPRYD3Q8NCJ5 442 aa12.26□□□□□ -0.45
TNIK-203ENST00000357327 IGF1RP08069 1367 aa12.25□□□□□ -0.45
TNIK-203ENST00000357327 XRCC6P12956 609 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNIK-203ENST00000357327 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
TNIK-203ENST00000357327 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
TNIK-203ENST00000357327 TRAK2O60296 914 aa12.24□□□□□ -0.45
TNIK-203ENST00000357327 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
TNIK-203ENST00000357327 CASKIN1Q8WXD9 1431 aa12.24□□□□□ -0.45
TNIK-203ENST00000357327 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
TNIK-203ENST00000357327 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
TNIK-203ENST00000357327 FYCO1Q9BQS8 1478 aa12.24□□□□□ -0.45
TNIK-203ENST00000357327 C8orf34Q49A92 452 aa12.23□□□□□ -0.45
TNIK-203ENST00000357327 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
TNIK-203ENST00000357327 GBP4Q96PP9 640 aa12.23□□□□□ -0.45
TNIK-203ENST00000357327 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
TNIK-203ENST00000357327 ATAD2BQ9ULI0 1458 aa12.22□□□□□ -0.45
TNIK-203ENST00000357327 MCM4P33991 863 aa12.22□□□□□ -0.45
TNIK-203ENST00000357327 GRPEL1Q9HAV7 217 aa12.22□□□□□ -0.45
TNIK-203ENST00000357327 MTERF4Q7Z6M4 381 aaKnown RBP12.22□□□□□ -0.45
TNIK-203ENST00000357327 CUX1P39880 1505 aa12.22□□□□□ -0.45
TNIK-203ENST00000357327 SLC24A1O60721 1099 aa12.21□□□□□ -0.45
TNIK-203ENST00000357327 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
TNIK-203ENST00000357327 CC2D1BQ5T0F9 858 aaKnown RBP12.21□□□□□ -0.45
TNIK-203ENST00000357327 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
TNIK-203ENST00000357327 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
TNIK-203ENST00000357327 SKOR2Q2VWA4 1001 aaPredicted RBP12.2□□□□□ -0.46
TNIK-203ENST00000357327 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
TNIK-203ENST00000357327 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
TNIK-203ENST00000357327 DHX29Q7Z478 1369 aaKnown RBP12.19□□□□□ -0.46
TNIK-203ENST00000357327 PANK2Q9BZ23 570 aa12.18□□□□□ -0.46
TNIK-203ENST00000357327 AQRO60306 1485 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■■■■ 33.8
TNIK-203ENST00000357327 LRPPRCP42704 1394 aaKnown RBP12.17□□□□□ -0.46
TNIK-203ENST00000357327 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
TNIK-203ENST00000357327 ST20-MTHFSA0A0A6YYL1 179 aa12.17□□□□□ -0.46
TNIK-203ENST00000357327 PMFBP1Q8TBY8 1022 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms