RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 ZMYM4Q5VZL5 1548 aa21.67■■□□□ 1.06
SHANK2-202ENST00000357171 ARHGAP5Q13017 1502 aa21.66■■□□□ 1.06
SHANK2-202ENST00000357171 EHBP1L1Q8N3D4 1523 aa21.65■■□□□ 1.06
SHANK2-202ENST00000357171 TIAM1Q13009 1591 aa21.64■■□□□ 1.05
SHANK2-202ENST00000357171 SCAPERQ9BY12 1400 aa21.64■■□□□ 1.05
SHANK2-202ENST00000357171 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
SHANK2-202ENST00000357171 KDM4FA0A1W2PPD8 638 aa21.63■■□□□ 1.05
SHANK2-202ENST00000357171 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
SHANK2-202ENST00000357171 POGZQ7Z3K3 1410 aa21.63■■□□□ 1.05
SHANK2-202ENST00000357171 MAP3K1Q13233 1512 aa21.62■■□□□ 1.05
SHANK2-202ENST00000357171 MAGI2Q86UL8 1455 aa21.59■■□□□ 1.05
SHANK2-202ENST00000357171 ABCC1P33527 1531 aa21.59■■□□□ 1.05
SHANK2-202ENST00000357171 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
SHANK2-202ENST00000357171 KDM5CP41229 1560 aa21.57■■□□□ 1.04
SHANK2-202ENST00000357171 ITSN2Q9NZM3 1697 aa21.57■■□□□ 1.04
SHANK2-202ENST00000357171 ZNF518AQ6AHZ1 1483 aa21.56■■□□□ 1.04
SHANK2-202ENST00000357171 ARHGEF12Q9NZN5 1544 aa21.55■■□□□ 1.04
SHANK2-202ENST00000357171 SAMD9LQ8IVG5 1584 aa21.55■■□□□ 1.04
SHANK2-202ENST00000357171 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
SHANK2-202ENST00000357171 LRRC9Q6ZRR7 1453 aa21.55■■□□□ 1.04
SHANK2-202ENST00000357171 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
SHANK2-202ENST00000357171 ZFYVE16Q7Z3T8 1539 aa21.53■■□□□ 1.04
SHANK2-202ENST00000357171 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
SHANK2-202ENST00000357171 YEATS2Q9ULM3 1422 aa21.51■■□□□ 1.03
SHANK2-202ENST00000357171 NCOA2Q15596 1464 aa21.51■■□□□ 1.03
SHANK2-202ENST00000357171 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
SHANK2-202ENST00000357171 KIAA1107Q9UPP5 1409 aa21.49■■□□□ 1.03
SHANK2-202ENST00000357171 SIGLEC1Q9BZZ2 1709 aa21.49■■□□□ 1.03
SHANK2-202ENST00000357171 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
SHANK2-202ENST00000357171 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
SHANK2-202ENST00000357171 MLH3Q9UHC1 1453 aa21.48■■□□□ 1.03
SHANK2-202ENST00000357171 CFDP1Q9UEE9 299 aaPredicted RBP21.48■■□□□ 1.03
SHANK2-202ENST00000357171 ADAMTSL3P82987 1691 aa21.47■■□□□ 1.03
SHANK2-202ENST00000357171 BCORL1Q5H9F3 1711 aa21.47■■□□□ 1.03
SHANK2-202ENST00000357171 PLEKHH2Q8IVE3 1493 aa21.47■■□□□ 1.03
SHANK2-202ENST00000357171 SYCP2Q9BX26 1530 aa21.46■■□□□ 1.03
SHANK2-202ENST00000357171 KANK4Q5T7N3 995 aaPredicted RBP21.45■■□□□ 1.02
SHANK2-202ENST00000357171 ATP10AO60312 1499 aa21.44■■□□□ 1.02
SHANK2-202ENST00000357171 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
SHANK2-202ENST00000357171 REREQ9P2R6 1566 aa21.42■■□□□ 1.02
SHANK2-202ENST00000357171 DIP2CQ9Y2E4 1556 aa21.42■■□□□ 1.02
SHANK2-202ENST00000357171 ZNF777Q9ULD5 760 aaPredicted RBP21.42■■□□□ 1.02
SHANK2-202ENST00000357171 ABCA6Q8N139 1617 aa21.41■■□□□ 1.02
SHANK2-202ENST00000357171 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
SHANK2-202ENST00000357171 C9orf84Q5VXU9 1444 aa21.41■■□□□ 1.02
SHANK2-202ENST00000357171 HNRNPMP52272 730 aaKnown RBP eCLIP21.38■■□□□ 1.014e-9■■■■■ 39.3
SHANK2-202ENST00000357171 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
SHANK2-202ENST00000357171 INO80Q9ULG1 1556 aaPredicted RBP21.37■■□□□ 1.01
SHANK2-202ENST00000357171 CAMSAP2Q08AD1 1489 aa21.35■■□□□ 1.01
SHANK2-202ENST00000357171 MADDQ8WXG6 1647 aa21.35■■□□□ 1.01
SHANK2-202ENST00000357171 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
SHANK2-202ENST00000357171 ARID4BQ4LE39 1312 aaPredicted RBP21.33■■□□□ 1.01
SHANK2-202ENST00000357171 AGLP35573 1532 aa21.33■■□□□ 1
SHANK2-202ENST00000357171 APLP2Q06481 763 aa21.33■■□□□ 1
SHANK2-202ENST00000357171 MYOM3Q5VTT5 1437 aa21.32■■□□□ 1
SHANK2-202ENST00000357171 MIA2Q96PC5 1412 aa21.32■■□□□ 1
SHANK2-202ENST00000357171 ARHGEF5Q12774 1597 aa21.32■■□□□ 1
SHANK2-202ENST00000357171 SPAG9O60271 1321 aaKnown RBP21.32■■□□□ 1
SHANK2-202ENST00000357171 PTPRMP28827 1452 aa21.3■■□□□ 1
SHANK2-202ENST00000357171 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
SHANK2-202ENST00000357171 RTEL1-TNFRSF6BF6WH68 1400 aa21.29■■□□□ 1
SHANK2-202ENST00000357171 FER1L4A9Z1Z3 1794 aa21.28■■□□□ 1
SHANK2-202ENST00000357171 CCDC141Q6ZP82 1450 aa21.28■■□□□ 1
SHANK2-202ENST00000357171 RIMS1Q86UR5 1692 aaKnown RBP21.27■■□□□ 1
SHANK2-202ENST00000357171 PLXNC1O60486 1568 aa21.27■■□□□ 1
SHANK2-202ENST00000357171 ADGBQ8N7X0 1667 aa21.27■■□□□ 1
SHANK2-202ENST00000357171 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
SHANK2-202ENST00000357171 A2MP01023 1474 aa21.22■□□□□ 0.99
SHANK2-202ENST00000357171 MAST1Q9Y2H9 1570 aa21.21■□□□□ 0.99
SHANK2-202ENST00000357171 PTPN23Q9H3S7 1636 aa21.21■□□□□ 0.99
SHANK2-202ENST00000357171 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
SHANK2-202ENST00000357171 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
SHANK2-202ENST00000357171 MLECQ14165 292 aa21.19■□□□□ 0.98
SHANK2-202ENST00000357171 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
SHANK2-202ENST00000357171 DHX29Q7Z478 1369 aaKnown RBP21.14■□□□□ 0.98
SHANK2-202ENST00000357171 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
SHANK2-202ENST00000357171 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
SHANK2-202ENST00000357171 DNMT1P26358 1616 aaKnown RBP21.13■□□□□ 0.97
SHANK2-202ENST00000357171 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
SHANK2-202ENST00000357171 ABCC5O15440 1437 aa21.12■□□□□ 0.97
SHANK2-202ENST00000357171 MROH2AA6NES4 1674 aa21.11■□□□□ 0.97
SHANK2-202ENST00000357171 C3P01024 1663 aa21.1■□□□□ 0.97
SHANK2-202ENST00000357171 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
SHANK2-202ENST00000357171 CNTLNQ9NXG0 1405 aa21.09■□□□□ 0.97
SHANK2-202ENST00000357171 DAPK1P53355 1430 aa21.07■□□□□ 0.96
SHANK2-202ENST00000357171 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
SHANK2-202ENST00000357171 LMTK3Q96Q04 1460 aa21.06■□□□□ 0.96
SHANK2-202ENST00000357171 CLTCQ00610 1675 aaKnown RBP21.05■□□□□ 0.96
SHANK2-202ENST00000357171 EIF2AK4Q9P2K8 1649 aaKnown RBP21.04■□□□□ 0.96
SHANK2-202ENST00000357171 FAM135AQ9P2D6 1515 aa21.03■□□□□ 0.96
SHANK2-202ENST00000357171 RNF17Q9BXT8 1623 aaKnown RBP21.03■□□□□ 0.96
SHANK2-202ENST00000357171 CEBPAP49715 358 aaPredicted RBP21.02■□□□□ 0.96
SHANK2-202ENST00000357171 PREX1Q8TCU6 1659 aa21.02■□□□□ 0.96
SHANK2-202ENST00000357171 DUOX2Q9NRD8 1548 aa21.02■□□□□ 0.96
SHANK2-202ENST00000357171 GGT6Q6P531 493 aa21■□□□□ 0.95
SHANK2-202ENST00000357171 KIF3BO15066 747 aa20.99■□□□□ 0.95
SHANK2-202ENST00000357171 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
SHANK2-202ENST00000357171 ZMYM3Q14202 1370 aa20.99■□□□□ 0.95
SHANK2-202ENST00000357171 ADGRL2O95490 1459 aa20.98■□□□□ 0.95
SHANK2-202ENST00000357171 MROH1Q8NDA8 1641 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms