RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
PTBP1-203ENST00000356948 ADAMTS12P58397 1594 aa21.25■□□□□ 0.99
PTBP1-203ENST00000356948 NEFLP07196 543 aa21.25■□□□□ 0.99
PTBP1-203ENST00000356948 SLC4A1APQ9BWU0 796 aaKnown RBP21.25■□□□□ 0.99
PTBP1-203ENST00000356948 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
PTBP1-203ENST00000356948 WDR62O43379 1518 aa21.25■□□□□ 0.99
PTBP1-203ENST00000356948 POLR3GLQ9BT43 218 aa21.24■□□□□ 0.99
PTBP1-203ENST00000356948 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
PTBP1-203ENST00000356948 ABCC5O15440 1437 aa21.22■□□□□ 0.99
PTBP1-203ENST00000356948 DISP1Q96F81 1524 aa21.21■□□□□ 0.99
PTBP1-203ENST00000356948 DAPK1P53355 1430 aa21.2■□□□□ 0.98
PTBP1-203ENST00000356948 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
PTBP1-203ENST00000356948 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
PTBP1-203ENST00000356948 GCC2Q8IWJ2 1684 aa21.18■□□□□ 0.98
PTBP1-203ENST00000356948 ANKRD30BQ9BXX2 1392 aa21.18■□□□□ 0.98
PTBP1-203ENST00000356948 PLB1Q6P1J6 1458 aa21.17■□□□□ 0.98
PTBP1-203ENST00000356948 RBM19Q9Y4C8 960 aaKnown RBP21.16■□□□□ 0.98
PTBP1-203ENST00000356948 MIA2Q96PC5 1412 aa21.14■□□□□ 0.98
PTBP1-203ENST00000356948 CFDP1Q9UEE9 299 aaPredicted RBP21.14■□□□□ 0.98
PTBP1-203ENST00000356948 PRKRIP1Q9H875 184 aaPredicted RBP21.13■□□□□ 0.97
PTBP1-203ENST00000356948 CCDC7Q96M83 1385 aa21.13■□□□□ 0.97
PTBP1-203ENST00000356948 KIF7Q2M1P5 1343 aa21.13■□□□□ 0.97
PTBP1-203ENST00000356948 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
PTBP1-203ENST00000356948 MRS2Q9HD23 443 aa21.12■□□□□ 0.97
PTBP1-203ENST00000356948 KIAA0556O60303 1618 aa21.1■□□□□ 0.97
PTBP1-203ENST00000356948 CNTLNQ9NXG0 1405 aa21.09■□□□□ 0.97
PTBP1-203ENST00000356948 KIAA0586Q9BVV6 1533 aa21.08■□□□□ 0.96
PTBP1-203ENST00000356948 TEX14Q8IWB6 1497 aa21.07■□□□□ 0.96
PTBP1-203ENST00000356948 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
PTBP1-203ENST00000356948 NCOA1Q15788 1441 aa21.07■□□□□ 0.96
PTBP1-203ENST00000356948 PKD2Q13563 968 aa21.07■□□□□ 0.96
PTBP1-203ENST00000356948 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
PTBP1-203ENST00000356948 AKNAQ7Z591 1439 aa21.05■□□□□ 0.96
PTBP1-203ENST00000356948 KIF14Q15058 1648 aa21.04■□□□□ 0.96
PTBP1-203ENST00000356948 KDM2AQ9Y2K7 1162 aa21.04■□□□□ 0.96
PTBP1-203ENST00000356948 PZPP20742 1482 aa21.03■□□□□ 0.96
PTBP1-203ENST00000356948 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
PTBP1-203ENST00000356948 RAPGEF6Q8TEU7 1601 aa21.02■□□□□ 0.96
PTBP1-203ENST00000356948 DNMT1P26358 1616 aaKnown RBP21.02■□□□□ 0.96
PTBP1-203ENST00000356948 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
PTBP1-203ENST00000356948 JPH4Q96JJ6 628 aa21.02■□□□□ 0.96
PTBP1-203ENST00000356948 CDK11AQ9UQ88 783 aaPredicted RBP21.02■□□□□ 0.96
PTBP1-203ENST00000356948 CAMSAP2Q08AD1 1489 aa21.02■□□□□ 0.95
PTBP1-203ENST00000356948 SPATA31E1Q6ZUB1 1445 aa21■□□□□ 0.95
PTBP1-203ENST00000356948 ROCK1Q13464 1354 aa21■□□□□ 0.95
PTBP1-203ENST00000356948 B4GALNT3Q6L9W6 998 aa21■□□□□ 0.95
PTBP1-203ENST00000356948 GPATCH8Q9UKJ3 1502 aaKnown RBP21■□□□□ 0.95
PTBP1-203ENST00000356948 MSH5O43196 834 aa20.99■□□□□ 0.95
PTBP1-203ENST00000356948 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.954e-7■■■■□ 20
PTBP1-203ENST00000356948 CEP170Q5SW79 1584 aa20.98■□□□□ 0.95
PTBP1-203ENST00000356948 TROQ12816 1431 aaPredicted RBP20.97■□□□□ 0.95
PTBP1-203ENST00000356948 ERCC6Q03468 1493 aa20.95■□□□□ 0.94
PTBP1-203ENST00000356948 USP47Q96K76 1375 aa20.92■□□□□ 0.94
PTBP1-203ENST00000356948 BCORL1Q5H9F3 1711 aa20.91■□□□□ 0.94
PTBP1-203ENST00000356948 NUP155O75694 1391 aa20.91■□□□□ 0.94
PTBP1-203ENST00000356948 DHX29Q7Z478 1369 aaKnown RBP20.88■□□□□ 0.93
PTBP1-203ENST00000356948 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
PTBP1-203ENST00000356948 ANKRD50Q9ULJ7 1429 aa20.88■□□□□ 0.93
PTBP1-203ENST00000356948 KIAA1107Q9UPP5 1409 aa20.87■□□□□ 0.93
PTBP1-203ENST00000356948 DCAF11Q8TEB1 546 aa20.87■□□□□ 0.93
PTBP1-203ENST00000356948 SALL2Q9Y467 1007 aaPredicted RBP20.86■□□□□ 0.93
PTBP1-203ENST00000356948 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
PTBP1-203ENST00000356948 RGL3Q3MIN7 710 aa20.85■□□□□ 0.93
PTBP1-203ENST00000356948 CARD11Q9BXL7 1154 aa20.85■□□□□ 0.93
PTBP1-203ENST00000356948 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
PTBP1-203ENST00000356948 ANKRD30AQ9BXX3 1397 aa20.83■□□□□ 0.92
PTBP1-203ENST00000356948 ATP10BO94823 1461 aa20.83■□□□□ 0.92
PTBP1-203ENST00000356948 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
PTBP1-203ENST00000356948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.921e-7■■□□□ 14.5
PTBP1-203ENST00000356948 MBD5Q9P267 1494 aa20.81■□□□□ 0.92
PTBP1-203ENST00000356948 C9orf84Q5VXU9 1444 aa20.79■□□□□ 0.92
PTBP1-203ENST00000356948 TSPY4P0CV99 314 aa20.79■□□□□ 0.92
PTBP1-203ENST00000356948 TSPY10P0CW01 314 aa20.79■□□□□ 0.92
PTBP1-203ENST00000356948 PPP4R2Q9NY27 417 aa20.79■□□□□ 0.92
PTBP1-203ENST00000356948 NBPF1Q3BBV0 1214 aa20.77■□□□□ 0.92
PTBP1-203ENST00000356948 MAGI1Q96QZ7 1491 aaPredicted RBP20.76■□□□□ 0.91
PTBP1-203ENST00000356948 CARMIL2Q6F5E8 1435 aa20.76■□□□□ 0.91
PTBP1-203ENST00000356948 PRKCSHP14314 528 aaPredicted RBP20.76■□□□□ 0.91
PTBP1-203ENST00000356948 CDC42BPAQ5VT25 1732 aa20.75■□□□□ 0.91
PTBP1-203ENST00000356948 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
PTBP1-203ENST00000356948 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
PTBP1-203ENST00000356948 ADGRL2O95490 1459 aa20.73■□□□□ 0.91
PTBP1-203ENST00000356948 NBR1Q14596 966 aa20.73■□□□□ 0.91
PTBP1-203ENST00000356948 NUP160Q12769 1436 aa20.73■□□□□ 0.91
PTBP1-203ENST00000356948 TMC1Q8TDI8 760 aa20.72■□□□□ 0.91
PTBP1-203ENST00000356948 PNISRQ8TF01 805 aaKnown RBP20.72■□□□□ 0.91
PTBP1-203ENST00000356948 KDM5CP41229 1560 aa20.72■□□□□ 0.91
PTBP1-203ENST00000356948 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
PTBP1-203ENST00000356948 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
PTBP1-203ENST00000356948 CROCC2H7BZ55 1655 aa20.71■□□□□ 0.91
PTBP1-203ENST00000356948 ABCA8O94911 1581 aa20.67■□□□□ 0.9
PTBP1-203ENST00000356948 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
PTBP1-203ENST00000356948 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
PTBP1-203ENST00000356948 PTPRGP23470 1445 aa20.65■□□□□ 0.9
PTBP1-203ENST00000356948 NUDCQ9Y266 331 aa20.65■□□□□ 0.9
PTBP1-203ENST00000356948 POLR1AO95602 1720 aaPredicted RBP20.65■□□□□ 0.9
PTBP1-203ENST00000356948 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
PTBP1-203ENST00000356948 RALGAPBQ86X10 1494 aa20.61■□□□□ 0.89
PTBP1-203ENST00000356948 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
PTBP1-203ENST00000356948 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms