RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
STRN3-201ENST00000355683 RGS3P49796 1198 aa20.31■□□□□ 0.84
STRN3-201ENST00000355683 PPP4R2Q9NY27 417 aa20.31■□□□□ 0.84
STRN3-201ENST00000355683 CCER2I3L3R5 266 aa20.29■□□□□ 0.84
STRN3-201ENST00000355683 FMN1Q68DA7 1419 aa20.29■□□□□ 0.84
STRN3-201ENST00000355683 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
STRN3-201ENST00000355683 PTPRGP23470 1445 aa20.28■□□□□ 0.84
STRN3-201ENST00000355683 PLIN1O60240 522 aa20.27■□□□□ 0.84
STRN3-201ENST00000355683 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.83
STRN3-201ENST00000355683 WDR43Q15061 677 aaKnown RBP eCLIP20.26■□□□□ 0.834e-6■■□□□ 14
STRN3-201ENST00000355683 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
STRN3-201ENST00000355683 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
STRN3-201ENST00000355683 ST20-MTHFSA0A0A6YYL1 179 aa20.24■□□□□ 0.83
STRN3-201ENST00000355683 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
STRN3-201ENST00000355683 C11orf95C9JLR9 678 aaPredicted RBP20.2■□□□□ 0.82
STRN3-201ENST00000355683 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
STRN3-201ENST00000355683 NUP155O75694 1391 aa20.19■□□□□ 0.82
STRN3-201ENST00000355683 NBPF8Q3BBV2 869 aa20.18■□□□□ 0.82
STRN3-201ENST00000355683 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
STRN3-201ENST00000355683 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
STRN3-201ENST00000355683 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
STRN3-201ENST00000355683 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
STRN3-201ENST00000355683 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
STRN3-201ENST00000355683 CCDC18Q5T9S5 1454 aa20.14■□□□□ 0.82
STRN3-201ENST00000355683 SLC4A3P48751 1232 aa20.14■□□□□ 0.81
STRN3-201ENST00000355683 SKAP1Q86WV1 359 aa20.14■□□□□ 0.81
STRN3-201ENST00000355683 TIMELESSQ9UNS1 1208 aa20.13■□□□□ 0.81
STRN3-201ENST00000355683 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
STRN3-201ENST00000355683 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
STRN3-201ENST00000355683 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
STRN3-201ENST00000355683 MSH5O43196 834 aa20.11■□□□□ 0.81
STRN3-201ENST00000355683 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
STRN3-201ENST00000355683 WDR62O43379 1518 aa20.1■□□□□ 0.81
STRN3-201ENST00000355683 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
STRN3-201ENST00000355683 NOP58Q9Y2X3 529 aaKnown RBP20.09■□□□□ 0.81
STRN3-201ENST00000355683 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
STRN3-201ENST00000355683 DEKP35659 375 aaKnown RBP20.08■□□□□ 0.8
STRN3-201ENST00000355683 SPRYD3Q8NCJ5 442 aa20.07■□□□□ 0.8
STRN3-201ENST00000355683 KIF7Q2M1P5 1343 aa20.07■□□□□ 0.8
STRN3-201ENST00000355683 PRKCSHP14314 528 aaPredicted RBP20.07■□□□□ 0.8
STRN3-201ENST00000355683 EXOC6Q8TAG9 804 aa20.06■□□□□ 0.8
STRN3-201ENST00000355683 ESF1Q9H501 851 aaKnown RBP20.06■□□□□ 0.8
STRN3-201ENST00000355683 STAG3Q9UJ98 1225 aa20.06■□□□□ 0.8
STRN3-201ENST00000355683 FGD6Q6ZV73 1430 aa20.06■□□□□ 0.8
STRN3-201ENST00000355683 RRBP1Q9P2E9 1410 aaKnown RBP20.06■□□□□ 0.8
STRN3-201ENST00000355683 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
STRN3-201ENST00000355683 NEFMP07197 916 aa20.04■□□□□ 0.8
STRN3-201ENST00000355683 CDCA7LQ96GN5 454 aa20.02■□□□□ 0.8
STRN3-201ENST00000355683 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
STRN3-201ENST00000355683 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
STRN3-201ENST00000355683 GGT6Q6P531 493 aa20■□□□□ 0.79
STRN3-201ENST00000355683 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
STRN3-201ENST00000355683 ROCK2O75116 1388 aaKnown RBP19.99■□□□□ 0.79
STRN3-201ENST00000355683 STK26Q9P289 416 aa19.98■□□□□ 0.79
STRN3-201ENST00000355683 CUL7Q14999 1698 aa19.98■□□□□ 0.79
STRN3-201ENST00000355683 SOX12O15370 315 aa19.97■□□□□ 0.79
STRN3-201ENST00000355683 NBPF1Q3BBV0 1214 aa19.97■□□□□ 0.79
STRN3-201ENST00000355683 EFCAB2Q5VUJ9 269 aa19.97■□□□□ 0.79
STRN3-201ENST00000355683 CLUAP1Q96AJ1 413 aa19.97■□□□□ 0.79
STRN3-201ENST00000355683 BCL2L13Q9BXK5 485 aa19.97■□□□□ 0.79
STRN3-201ENST00000355683 EIF4G3O43432 1585 aaKnown RBP19.97■□□□□ 0.79
STRN3-201ENST00000355683 PANK3Q9H999 370 aa19.96■□□□□ 0.79
STRN3-201ENST00000355683 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
STRN3-201ENST00000355683 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
STRN3-201ENST00000355683 IQGAP2Q13576 1575 aa19.95■□□□□ 0.78
STRN3-201ENST00000355683 PAK3O75914 559 aaPredicted RBP19.94■□□□□ 0.78
STRN3-201ENST00000355683 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
STRN3-201ENST00000355683 U2SURPO15042 1029 aaKnown RBP19.93■□□□□ 0.78
STRN3-201ENST00000355683 USP47Q96K76 1375 aa19.93■□□□□ 0.78
STRN3-201ENST00000355683 AKNAQ7Z591 1439 aa19.92■□□□□ 0.78
STRN3-201ENST00000355683 TPRNQ4KMQ1 711 aa19.92■□□□□ 0.78
STRN3-201ENST00000355683 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
STRN3-201ENST00000355683 MLECQ14165 292 aa19.91■□□□□ 0.78
STRN3-201ENST00000355683 CCDC7Q96M83 1385 aa19.9■□□□□ 0.78
STRN3-201ENST00000355683 FAM69CQ0P6D2 419 aa19.9■□□□□ 0.78
STRN3-201ENST00000355683 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.9■□□□□ 0.78
STRN3-201ENST00000355683 TMF1P82094 1093 aa19.89■□□□□ 0.77
STRN3-201ENST00000355683 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.88■□□□□ 0.77
STRN3-201ENST00000355683 CASKIN1Q8WXD9 1431 aa19.88■□□□□ 0.77
STRN3-201ENST00000355683 MYOM3Q5VTT5 1437 aa19.87■□□□□ 0.77
STRN3-201ENST00000355683 HSP90AA1P07900 732 aaKnown RBP19.87■□□□□ 0.77
STRN3-201ENST00000355683 KIF3BO15066 747 aa19.86■□□□□ 0.77
STRN3-201ENST00000355683 UACAQ9BZF9 1416 aa19.86■□□□□ 0.77
STRN3-201ENST00000355683 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
STRN3-201ENST00000355683 TARBP1Q13395 1621 aaKnown RBP19.85■□□□□ 0.77
STRN3-201ENST00000355683 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
STRN3-201ENST00000355683 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
STRN3-201ENST00000355683 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
STRN3-201ENST00000355683 EFCAB5A4FU69 1503 aa19.84■□□□□ 0.77
STRN3-201ENST00000355683 CRBNQ96SW2 442 aa19.84■□□□□ 0.77
STRN3-201ENST00000355683 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.77
STRN3-201ENST00000355683 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
STRN3-201ENST00000355683 ZBTB7CA1YPR0 619 aa19.82■□□□□ 0.76
STRN3-201ENST00000355683 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
STRN3-201ENST00000355683 ZBED9Q6R2W3 1325 aa19.81■□□□□ 0.76
STRN3-201ENST00000355683 KTN1Q86UP2 1357 aaKnown RBP19.8■□□□□ 0.76
STRN3-201ENST00000355683 NUTM2FA1L443 756 aa19.79■□□□□ 0.76
STRN3-201ENST00000355683 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
STRN3-201ENST00000355683 TIAM1Q13009 1591 aa19.79■□□□□ 0.76
STRN3-201ENST00000355683 NAIPQ13075 1403 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms