RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
CD46-203ENST00000354848 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
CD46-203ENST00000354848 FYCO1Q9BQS8 1478 aa10.41□□□□□ -0.74
CD46-203ENST00000354848 BICRAQ9NZM4 1560 aa10.41□□□□□ -0.74
CD46-203ENST00000354848 DHX29Q7Z478 1369 aaKnown RBP10.41□□□□□ -0.74
CD46-203ENST00000354848 IGF1RP08069 1367 aa10.4□□□□□ -0.74
CD46-203ENST00000354848 CNGB1Q14028 1251 aaPredicted RBP10.4□□□□□ -0.74
CD46-203ENST00000354848 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
CD46-203ENST00000354848 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
CD46-203ENST00000354848 PNISRQ8TF01 805 aaKnown RBP10.39□□□□□ -0.75
CD46-203ENST00000354848 ZMYND15Q9H091 742 aa10.39□□□□□ -0.75
CD46-203ENST00000354848 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
CD46-203ENST00000354848 SKAP1Q86WV1 359 aa10.38□□□□□ -0.75
CD46-203ENST00000354848 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
CD46-203ENST00000354848 DAXXQ9UER7 740 aaPredicted RBP10.38□□□□□ -0.75
CD46-203ENST00000354848 FHOD3Q2V2M9 1422 aa10.38□□□□□ -0.75
CD46-203ENST00000354848 CASKIN1Q8WXD9 1431 aa10.38□□□□□ -0.75
CD46-203ENST00000354848 NBPF8Q3BBV2 869 aa10.37□□□□□ -0.75
CD46-203ENST00000354848 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
CD46-203ENST00000354848 RCAN3Q9UKA8 241 aa10.37□□□□□ -0.75
CD46-203ENST00000354848 RRAGDQ9NQL2 400 aaPredicted RBP10.36□□□□□ -0.75
CD46-203ENST00000354848 GCC2Q8IWJ2 1684 aa10.36□□□□□ -0.75
CD46-203ENST00000354848 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
CD46-203ENST00000354848 TMC1Q8TDI8 760 aa10.34□□□□□ -0.75
CD46-203ENST00000354848 RRP7BPQ9NSQ0 103 aa10.34□□□□□ -0.75
CD46-203ENST00000354848 LRPPRCP42704 1394 aaKnown RBP10.34□□□□□ -0.75
CD46-203ENST00000354848 KDM6BO15054 1643 aa10.33□□□□□ -0.76
CD46-203ENST00000354848 MTUS2Q5JR59 1369 aa10.33□□□□□ -0.76
CD46-203ENST00000354848 BCORL1Q5H9F3 1711 aa10.33□□□□□ -0.76
CD46-203ENST00000354848 MYOM3Q5VTT5 1437 aa10.33□□□□□ -0.76
CD46-203ENST00000354848 TEX14Q8IWB6 1497 aa10.32□□□□□ -0.76
CD46-203ENST00000354848 MPHOSPH9Q99550 1183 aa10.32□□□□□ -0.76
CD46-203ENST00000354848 FOXD1Q16676 465 aa10.32□□□□□ -0.76
CD46-203ENST00000354848 EFCAB5A4FU69 1503 aa10.31□□□□□ -0.76
CD46-203ENST00000354848 MIA2Q96PC5 1412 aa10.31□□□□□ -0.76
CD46-203ENST00000354848 POLR3GLQ9BT43 218 aa10.31□□□□□ -0.76
CD46-203ENST00000354848 RPRD2Q5VT52 1461 aaKnown RBP10.31□□□□□ -0.76
CD46-203ENST00000354848 LRRIQ1Q96JM4 1722 aa10.31□□□□□ -0.76
CD46-203ENST00000354848 HSP90AA2PQ14568 343 aaPredicted RBP10.3□□□□□ -0.76
CD46-203ENST00000354848 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
CD46-203ENST00000354848 PLIN1O60240 522 aa10.29□□□□□ -0.76
CD46-203ENST00000354848 POGKQ9P215 609 aa10.29□□□□□ -0.76
CD46-203ENST00000354848 SUPT6HQ7KZ85 1726 aaKnown RBP10.29□□□□□ -0.76
CD46-203ENST00000354848 RRP9O43818 475 aaKnown RBP10.29□□□□□ -0.76
CD46-203ENST00000354848 C8orf34Q49A92 452 aa10.29□□□□□ -0.76
CD46-203ENST00000354848 CRBNQ96SW2 442 aa10.29□□□□□ -0.76
CD46-203ENST00000354848 SNAPC4Q5SXM2 1469 aa10.29□□□□□ -0.76
CD46-203ENST00000354848 FAM161AQ3B820 660 aa10.28□□□□□ -0.76
CD46-203ENST00000354848 NAP1L5Q96NT1 182 aaPredicted RBP10.28□□□□□ -0.76
CD46-203ENST00000354848 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
CD46-203ENST00000354848 PDE3BQ13370 1112 aa10.28□□□□□ -0.76
CD46-203ENST00000354848 BRD4O60885 1362 aaPredicted RBP10.27□□□□□ -0.77
CD46-203ENST00000354848 KDM2BQ8NHM5 1336 aa10.27□□□□□ -0.77
CD46-203ENST00000354848 HSP90AA1P07900 732 aaKnown RBP10.26□□□□□ -0.77
CD46-203ENST00000354848 L1TD1Q5T7N2 865 aaKnown RBP10.26□□□□□ -0.77
CD46-203ENST00000354848 KTN1Q86UP2 1357 aaKnown RBP10.26□□□□□ -0.77
CD46-203ENST00000354848 CDCA7LQ96GN5 454 aa10.26□□□□□ -0.77
CD46-203ENST00000354848 USP47Q96K76 1375 aa10.25□□□□□ -0.77
CD46-203ENST00000354848 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
CD46-203ENST00000354848 CFTRP13569 1480 aa10.25□□□□□ -0.77
CD46-203ENST00000354848 PNNQ9H307 717 aaKnown RBP10.25□□□□□ -0.77
CD46-203ENST00000354848 KIF15Q9NS87 1388 aa10.25□□□□□ -0.77
CD46-203ENST00000354848 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
CD46-203ENST00000354848 UGGT2Q9NYU1 1516 aa10.24□□□□□ -0.77
CD46-203ENST00000354848 CLCN1P35523 988 aa10.24□□□□□ -0.77
CD46-203ENST00000354848 KDM5CP41229 1560 aa10.24□□□□□ -0.77
CD46-203ENST00000354848 CTTNBP2Q8WZ74 1663 aa10.23□□□□□ -0.77
CD46-203ENST00000354848 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
CD46-203ENST00000354848 TCOF1Q13428 1488 aaKnown RBP10.23□□□□□ -0.77
CD46-203ENST00000354848 ROCK2O75116 1388 aaKnown RBP10.23□□□□□ -0.77
CD46-203ENST00000354848 CENPQQ7L2Z9 268 aaPredicted RBP10.23□□□□□ -0.77
CD46-203ENST00000354848 PODXL2Q9NZ53 605 aa10.23□□□□□ -0.77
CD46-203ENST00000354848 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
CD46-203ENST00000354848 ARHGEF11O15085 1522 aa10.22□□□□□ -0.77
CD46-203ENST00000354848 PRDM2Q13029 1718 aa10.22□□□□□ -0.77
CD46-203ENST00000354848 C20orf194Q5TEA3 1177 aa10.22□□□□□ -0.77
CD46-203ENST00000354848 RALBP1Q15311 655 aa10.22□□□□□ -0.77
CD46-203ENST00000354848 MBD5Q9P267 1494 aa10.2□□□□□ -0.78
CD46-203ENST00000354848 XRCC6P12956 609 aaKnown RBP eCLIP10.2□□□□□ -0.78
CD46-203ENST00000354848 THOC2Q8NI27 1593 aaKnown RBP10.2□□□□□ -0.78
CD46-203ENST00000354848 KIF14Q15058 1648 aa10.2□□□□□ -0.78
CD46-203ENST00000354848 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
CD46-203ENST00000354848 GRIN2BQ13224 1484 aa10.19□□□□□ -0.78
CD46-203ENST00000354848 E9PCH4 1651 aa10.19□□□□□ -0.78
CD46-203ENST00000354848 RGS3P49796 1198 aa10.19□□□□□ -0.78
CD46-203ENST00000354848 ARXQ96QS3 562 aa10.19□□□□□ -0.78
CD46-203ENST00000354848 HMGXB3Q12766 1538 aa10.18□□□□□ -0.78
CD46-203ENST00000354848 MAGI3Q5TCQ9 1506 aa10.18□□□□□ -0.78
CD46-203ENST00000354848 USP19O94966 1318 aa10.18□□□□□ -0.78
CD46-203ENST00000354848 ZNF326Q5BKZ1 582 aaKnown RBP10.18□□□□□ -0.78
CD46-203ENST00000354848 PANK2Q9BZ23 570 aa10.18□□□□□ -0.78
CD46-203ENST00000354848 SLKQ9H2G2 1235 aaPredicted RBP10.18□□□□□ -0.78
CD46-203ENST00000354848 GOLGA6L3A6NEY3 463 aa10.17□□□□□ -0.78
CD46-203ENST00000354848 NLRP13Q86W25 1043 aa10.17□□□□□ -0.78
CD46-203ENST00000354848 FSD2A1L4K1 749 aa10.17□□□□□ -0.78
CD46-203ENST00000354848 SLC4A1APQ9BWU0 796 aaKnown RBP10.17□□□□□ -0.78
CD46-203ENST00000354848 SAMD9Q5K651 1589 aa10.15□□□□□ -0.78
CD46-203ENST00000354848 BECN1Q14457 450 aa10.15□□□□□ -0.78
CD46-203ENST00000354848 ANTXR1Q9H6X2 564 aa10.15□□□□□ -0.78
CD46-203ENST00000354848 BLMP54132 1417 aaPredicted RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms