RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 CDC42BPBQ9Y5S2 1711 aa30.54■■■□□ 2.48
SIGMAR1-202ENST00000353468 ZNF777Q9ULD5 760 aaPredicted RBP30.53■■■□□ 2.48
SIGMAR1-202ENST00000353468 ZNF644Q9H582 1327 aaPredicted RBP30.51■■■□□ 2.48
SIGMAR1-202ENST00000353468 ARHGAP5Q13017 1502 aa30.5■■■□□ 2.47
SIGMAR1-202ENST00000353468 GLI2P10070 1586 aa30.49■■■□□ 2.47
SIGMAR1-202ENST00000353468 CD109Q6YHK3 1445 aa30.48■■■□□ 2.47
SIGMAR1-202ENST00000353468 FAM69CQ0P6D2 419 aa30.48■■■□□ 2.47
SIGMAR1-202ENST00000353468 DIP2BQ9P265 1576 aa30.47■■■□□ 2.47
SIGMAR1-202ENST00000353468 EFCAB2Q5VUJ9 269 aa30.47■■■□□ 2.47
SIGMAR1-202ENST00000353468 ARAP3Q8WWN8 1544 aa30.47■■■□□ 2.47
SIGMAR1-202ENST00000353468 CAMSAP2Q08AD1 1489 aa30.46■■■□□ 2.47
SIGMAR1-202ENST00000353468 ITGAEP38570 1179 aa30.45■■■□□ 2.47
SIGMAR1-202ENST00000353468 SAMD9LQ8IVG5 1584 aa30.4■■■□□ 2.46
SIGMAR1-202ENST00000353468 MAP3K4Q9Y6R4 1608 aa30.39■■■□□ 2.46
SIGMAR1-202ENST00000353468 FANCAO15360 1455 aa30.38■■■□□ 2.45
SIGMAR1-202ENST00000353468 PLEKHH2Q8IVE3 1493 aa30.35■■■□□ 2.45
SIGMAR1-202ENST00000353468 HNRNPMP52272 730 aaKnown RBP eCLIP30.34■■■□□ 2.45
SIGMAR1-202ENST00000353468 KIAA1107Q9UPP5 1409 aa30.33■■■□□ 2.45
SIGMAR1-202ENST00000353468 KIF13AQ9H1H9 1805 aa30.33■■■□□ 2.45
SIGMAR1-202ENST00000353468 DAPK1P53355 1430 aa30.32■■■□□ 2.44
SIGMAR1-202ENST00000353468 DNMT1P26358 1616 aaKnown RBP30.32■■■□□ 2.44
SIGMAR1-202ENST00000353468 ABCC5O15440 1437 aa30.31■■■□□ 2.44
SIGMAR1-202ENST00000353468 PTPRKQ15262 1439 aa30.31■■■□□ 2.44
SIGMAR1-202ENST00000353468 MBD5Q9P267 1494 aa30.3■■■□□ 2.44
SIGMAR1-202ENST00000353468 RSPH4AQ5TD94 716 aa30.29■■■□□ 2.44
SIGMAR1-202ENST00000353468 SYCP2Q9BX26 1530 aa30.29■■■□□ 2.44
SIGMAR1-202ENST00000353468 AKNAQ7Z591 1439 aa30.28■■■□□ 2.44
SIGMAR1-202ENST00000353468 ABCC1P33527 1531 aa30.27■■■□□ 2.44
SIGMAR1-202ENST00000353468 ARHGEF5Q12774 1597 aa30.27■■■□□ 2.44
SIGMAR1-202ENST00000353468 CFAP74Q9C0B2 1584 aa30.27■■■□□ 2.44
SIGMAR1-202ENST00000353468 ARHGEF12Q9NZN5 1544 aa30.26■■■□□ 2.43
SIGMAR1-202ENST00000353468 NEO1Q92859 1461 aa30.24■■■□□ 2.43
SIGMAR1-202ENST00000353468 ADGRL1O94910 1474 aa30.24■■■□□ 2.43
SIGMAR1-202ENST00000353468 CHIC2Q9UKJ5 165 aa30.24■■■□□ 2.43
SIGMAR1-202ENST00000353468 TSPOAP1O95153 1857 aa30.23■■■□□ 2.43
SIGMAR1-202ENST00000353468 CCDC141Q6ZP82 1450 aa30.22■■■□□ 2.43
SIGMAR1-202ENST00000353468 TSPY4P0CV99 314 aa30.21■■■□□ 2.43
SIGMAR1-202ENST00000353468 TSPY10P0CW01 314 aa30.21■■■□□ 2.43
SIGMAR1-202ENST00000353468 SCAPERQ9BY12 1400 aa30.21■■■□□ 2.43
SIGMAR1-202ENST00000353468 PPRC1Q5VV67 1664 aaKnown RBP30.19■■■□□ 2.42
SIGMAR1-202ENST00000353468 TRHP20396 242 aaPredicted RBP30.19■■■□□ 2.42
SIGMAR1-202ENST00000353468 TRAPPC8Q9Y2L5 1435 aa30.18■■■□□ 2.42
SIGMAR1-202ENST00000353468 CROCC2H7BZ55 1655 aa30.18■■■□□ 2.42
SIGMAR1-202ENST00000353468 TEX14Q8IWB6 1497 aa30.18■■■□□ 2.42
SIGMAR1-202ENST00000353468 SHANK2Q9UPX8 1470 aa30.17■■■□□ 2.42
SIGMAR1-202ENST00000353468 ROCK1Q13464 1354 aa30.14■■■□□ 2.42
SIGMAR1-202ENST00000353468 C9orf84Q5VXU9 1444 aa30.14■■■□□ 2.42
SIGMAR1-202ENST00000353468 AFAP1Q8N556 730 aa30.14■■■□□ 2.42
SIGMAR1-202ENST00000353468 RRP7BPQ9NSQ0 103 aa30.12■■■□□ 2.41
SIGMAR1-202ENST00000353468 ADGRL2O95490 1459 aa30.1■■■□□ 2.41
SIGMAR1-202ENST00000353468 HFM1A2PYH4 1435 aa30.1■■■□□ 2.41
SIGMAR1-202ENST00000353468 SETD5Q9C0A6 1442 aa30.1■■■□□ 2.41
SIGMAR1-202ENST00000353468 NCOA1Q15788 1441 aa30.09■■■□□ 2.41
SIGMAR1-202ENST00000353468 ANKRD30AQ9BXX3 1397 aa30.09■■■□□ 2.41
SIGMAR1-202ENST00000353468 MAST1Q9Y2H9 1570 aa30.08■■■□□ 2.41
SIGMAR1-202ENST00000353468 ADGBQ8N7X0 1667 aa30.08■■■□□ 2.41
SIGMAR1-202ENST00000353468 DENND4BO75064 1496 aaPredicted RBP30.07■■■□□ 2.4
SIGMAR1-202ENST00000353468 NAIPQ13075 1403 aa30.07■■■□□ 2.4
SIGMAR1-202ENST00000353468 ZNF518AQ6AHZ1 1483 aa30.06■■■□□ 2.4
SIGMAR1-202ENST00000353468 SPAG9O60271 1321 aaKnown RBP30.06■■■□□ 2.4
SIGMAR1-202ENST00000353468 POGZQ7Z3K3 1410 aa30.06■■■□□ 2.4
SIGMAR1-202ENST00000353468 RTEL1-TNFRSF6BF6WH68 1400 aa30.02■■■□□ 2.4
SIGMAR1-202ENST00000353468 RAB3GAP2Q9H2M9 1393 aa30.02■■■□□ 2.4
SIGMAR1-202ENST00000353468 RAPGEF3O95398 923 aa30.02■■■□□ 2.4
SIGMAR1-202ENST00000353468 GCC2Q8IWJ2 1684 aa29.99■■■□□ 2.39
SIGMAR1-202ENST00000353468 KDM5CP41229 1560 aa29.98■■■□□ 2.39
SIGMAR1-202ENST00000353468 HRCP23327 699 aa29.97■■■□□ 2.39
SIGMAR1-202ENST00000353468 MYT1LQ9UL68 1186 aa29.97■■■□□ 2.39
SIGMAR1-202ENST00000353468 KIF15Q9NS87 1388 aa29.97■■■□□ 2.39
SIGMAR1-202ENST00000353468 RICTORQ6R327 1708 aa29.96■■■□□ 2.39
SIGMAR1-202ENST00000353468 ZFYVE16Q7Z3T8 1539 aa29.96■■■□□ 2.39
SIGMAR1-202ENST00000353468 PLXNC1O60486 1568 aa29.95■■■□□ 2.38
SIGMAR1-202ENST00000353468 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
SIGMAR1-202ENST00000353468 INO80Q9ULG1 1556 aaPredicted RBP29.94■■■□□ 2.38
SIGMAR1-202ENST00000353468 MLH3Q9UHC1 1453 aa29.93■■■□□ 2.38
SIGMAR1-202ENST00000353468 FRMPD1Q5SYB0 1578 aa29.9■■■□□ 2.38
SIGMAR1-202ENST00000353468 COL17A1Q9UMD9 1497 aaPredicted RBP29.9■■■□□ 2.38
SIGMAR1-202ENST00000353468 KIDINS220Q9ULH0 1771 aa29.89■■■□□ 2.38
SIGMAR1-202ENST00000353468 ANKRD50Q9ULJ7 1429 aa29.89■■■□□ 2.38
SIGMAR1-202ENST00000353468 HECW2Q9P2P5 1572 aa29.89■■■□□ 2.38
SIGMAR1-202ENST00000353468 KDM6BO15054 1643 aa29.88■■■□□ 2.37
SIGMAR1-202ENST00000353468 DUOX2Q9NRD8 1548 aa29.85■■■□□ 2.37
SIGMAR1-202ENST00000353468 ZMYM4Q5VZL5 1548 aa29.84■■■□□ 2.37
SIGMAR1-202ENST00000353468 ACIN1Q9UKV3 1341 aaKnown RBP29.81■■■□□ 2.36
SIGMAR1-202ENST00000353468 MAGI2Q86UL8 1455 aa29.8■■■□□ 2.36
SIGMAR1-202ENST00000353468 ERBINQ96RT1 1412 aa29.78■■■□□ 2.36
SIGMAR1-202ENST00000353468 DHX29Q7Z478 1369 aaKnown RBP29.78■■■□□ 2.36
SIGMAR1-202ENST00000353468 TRIM52Q96A61 297 aa29.77■■■□□ 2.36
SIGMAR1-202ENST00000353468 YEATS2Q9ULM3 1422 aa29.76■■■□□ 2.35
SIGMAR1-202ENST00000353468 ABCA6Q8N139 1617 aa29.76■■■□□ 2.35
SIGMAR1-202ENST00000353468 CCER1Q8TC90 406 aaPredicted RBP29.75■■■□□ 2.35
SIGMAR1-202ENST00000353468 A2MP01023 1474 aa29.74■■■□□ 2.35
SIGMAR1-202ENST00000353468 DHX57Q6P158 1386 aaKnown RBP29.73■■■□□ 2.35
SIGMAR1-202ENST00000353468 DIP2CQ9Y2E4 1556 aa29.73■■■□□ 2.35
SIGMAR1-202ENST00000353468 ATP10AO60312 1499 aa29.66■■■□□ 2.34
SIGMAR1-202ENST00000353468 KIF3BO15066 747 aa29.66■■■□□ 2.34
SIGMAR1-202ENST00000353468 NUP155O75694 1391 aa29.64■■■□□ 2.34
SIGMAR1-202ENST00000353468 EIF2AK4Q9P2K8 1649 aaKnown RBP29.64■■■□□ 2.34
SIGMAR1-202ENST00000353468 MPHOSPH9Q99550 1183 aa29.62■■■□□ 2.33
SIGMAR1-202ENST00000353468 UNC13BO14795 1591 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms