RNA–Protein interactions for RNA: ENST00000352103.6

STAG3L4-201, Transcript of stromal antigen 3-like 4 (pseudogene), humanhuman

BASIC

Gene STAG3L4, Length 530 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L4-201ENST00000352103 RAPGEF6Q8TEU7 1601 aa10.87□□□□□ -0.67
STAG3L4-201ENST00000352103 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
STAG3L4-201ENST00000352103 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
STAG3L4-201ENST00000352103 P3H3Q8IVL6 736 aa10.87□□□□□ -0.67
STAG3L4-201ENST00000352103 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
STAG3L4-201ENST00000352103 ATP10AO60312 1499 aa10.86□□□□□ -0.67
STAG3L4-201ENST00000352103 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
STAG3L4-201ENST00000352103 UHRF1BP1Q6BDS2 1440 aa10.85□□□□□ -0.67
STAG3L4-201ENST00000352103 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.85□□□□□ -0.67
STAG3L4-201ENST00000352103 PLEKHD1A6NEE1 506 aa10.84□□□□□ -0.67
STAG3L4-201ENST00000352103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
STAG3L4-201ENST00000352103 HNRNPUL2Q1KMD3 747 aaKnown RBP10.84□□□□□ -0.67
STAG3L4-201ENST00000352103 SAMD9Q5K651 1589 aa10.84□□□□□ -0.67
STAG3L4-201ENST00000352103 C9orf84Q5VXU9 1444 aa10.83□□□□□ -0.68
STAG3L4-201ENST00000352103 SCAPERQ9BY12 1400 aa10.82□□□□□ -0.68
STAG3L4-201ENST00000352103 NCOA1Q15788 1441 aa10.8□□□□□ -0.68
STAG3L4-201ENST00000352103 PLCH2O75038 1416 aa10.79□□□□□ -0.68
STAG3L4-201ENST00000352103 C3P01024 1663 aa10.78□□□□□ -0.68
STAG3L4-201ENST00000352103 TRAPPC8Q9Y2L5 1435 aa10.77□□□□□ -0.68
STAG3L4-201ENST00000352103 UBAP1LF5GYI3 381 aa10.77□□□□□ -0.69
STAG3L4-201ENST00000352103 REREQ9P2R6 1566 aa10.75□□□□□ -0.69
STAG3L4-201ENST00000352103 MED1Q15648 1581 aaPredicted RBP10.74□□□□□ -0.69
STAG3L4-201ENST00000352103 ZNF335Q9H4Z2 1342 aaPredicted RBP10.74□□□□□ -0.69
STAG3L4-201ENST00000352103 KDM5CP41229 1560 aa10.73□□□□□ -0.69
STAG3L4-201ENST00000352103 EFCAB2Q5VUJ9 269 aa10.72□□□□□ -0.69
STAG3L4-201ENST00000352103 AFAP1Q8N556 730 aa10.72□□□□□ -0.69
STAG3L4-201ENST00000352103 ZNF518AQ6AHZ1 1483 aa10.72□□□□□ -0.69
STAG3L4-201ENST00000352103 AGLP35573 1532 aa10.72□□□□□ -0.69
STAG3L4-201ENST00000352103 CAMSAP1Q5T5Y3 1602 aa10.72□□□□□ -0.69
STAG3L4-201ENST00000352103 DIP2CQ9Y2E4 1556 aa10.71□□□□□ -0.69
STAG3L4-201ENST00000352103 NCKAP5LQ9HCH0 1330 aa10.7□□□□□ -0.7
STAG3L4-201ENST00000352103 HSPA1LP34931 641 aa10.7□□□□□ -0.7
STAG3L4-201ENST00000352103 NPATQ14207 1427 aa10.69□□□□□ -0.7
STAG3L4-201ENST00000352103 CNTLNQ9NXG0 1405 aa10.69□□□□□ -0.7
STAG3L4-201ENST00000352103 MLH3Q9UHC1 1453 aa10.68□□□□□ -0.7
STAG3L4-201ENST00000352103 MYO5CQ9NQX4 1742 aa10.68□□□□□ -0.7
STAG3L4-201ENST00000352103 PKD2Q13563 968 aa10.68□□□□□ -0.7
STAG3L4-201ENST00000352103 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
STAG3L4-201ENST00000352103 ABCA6Q8N139 1617 aa10.67□□□□□ -0.7
STAG3L4-201ENST00000352103 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
STAG3L4-201ENST00000352103 CDK13Q14004 1512 aaKnown RBP10.67□□□□□ -0.7
STAG3L4-201ENST00000352103 TCOF1Q13428 1488 aaKnown RBP10.67□□□□□ -0.7
STAG3L4-201ENST00000352103 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
STAG3L4-201ENST00000352103 MROH2AA6NES4 1674 aa10.65□□□□□ -0.7
STAG3L4-201ENST00000352103 ZMYM3Q14202 1370 aa10.65□□□□□ -0.71
STAG3L4-201ENST00000352103 TOM1O60784 492 aa10.64□□□□□ -0.71
STAG3L4-201ENST00000352103 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
STAG3L4-201ENST00000352103 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
STAG3L4-201ENST00000352103 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
STAG3L4-201ENST00000352103 KIDINS220Q9ULH0 1771 aa10.62□□□□□ -0.71
STAG3L4-201ENST00000352103 KIF14Q15058 1648 aa10.62□□□□□ -0.71
STAG3L4-201ENST00000352103 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
STAG3L4-201ENST00000352103 PHF23Q9BUL5 403 aaPredicted RBP10.61□□□□□ -0.71
STAG3L4-201ENST00000352103 PPP6R1Q9UPN7 881 aa10.61□□□□□ -0.71
STAG3L4-201ENST00000352103 ARHGAP5Q13017 1502 aa10.61□□□□□ -0.71
STAG3L4-201ENST00000352103 CDC42BPBQ9Y5S2 1711 aa10.61□□□□□ -0.71
STAG3L4-201ENST00000352103 CPS1P31327 1500 aa10.6□□□□□ -0.71
STAG3L4-201ENST00000352103 ALKQ9UM73 1620 aa10.6□□□□□ -0.71
STAG3L4-201ENST00000352103 CEP170BQ9Y4F5 1589 aaPredicted RBP10.6□□□□□ -0.71
STAG3L4-201ENST00000352103 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
STAG3L4-201ENST00000352103 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
STAG3L4-201ENST00000352103 RGS17Q9UGC6 210 aaPredicted RBP10.59□□□□□ -0.71
STAG3L4-201ENST00000352103 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
STAG3L4-201ENST00000352103 TROQ12816 1431 aaPredicted RBP10.58□□□□□ -0.72
STAG3L4-201ENST00000352103 PTPRKQ15262 1439 aa10.58□□□□□ -0.72
STAG3L4-201ENST00000352103 MYO3AQ8NEV4 1616 aa10.58□□□□□ -0.72
STAG3L4-201ENST00000352103 ABCC1P33527 1531 aa10.58□□□□□ -0.72
STAG3L4-201ENST00000352103 SHANK2Q9UPX8 1470 aa10.57□□□□□ -0.72
STAG3L4-201ENST00000352103 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
STAG3L4-201ENST00000352103 CLTCQ00610 1675 aaKnown RBP10.55□□□□□ -0.72
STAG3L4-201ENST00000352103 HRCP23327 699 aa10.55□□□□□ -0.72
STAG3L4-201ENST00000352103 DNMT1P26358 1616 aaKnown RBP10.55□□□□□ -0.72
STAG3L4-201ENST00000352103 NEURL4Q96JN8 1562 aa10.54□□□□□ -0.72
STAG3L4-201ENST00000352103 PREX2Q70Z35 1606 aa10.54□□□□□ -0.72
STAG3L4-201ENST00000352103 A2ML1A8K2U0 1454 aa10.54□□□□□ -0.72
STAG3L4-201ENST00000352103 CLIP1P30622 1438 aa10.53□□□□□ -0.72
STAG3L4-201ENST00000352103 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
STAG3L4-201ENST00000352103 POLR1AO95602 1720 aaPredicted RBP10.53□□□□□ -0.72
STAG3L4-201ENST00000352103 SAMD9LQ8IVG5 1584 aa10.52□□□□□ -0.72
STAG3L4-201ENST00000352103 VWDEQ8N2E2 1590 aa10.52□□□□□ -0.72
STAG3L4-201ENST00000352103 PLXNC1O60486 1568 aa10.52□□□□□ -0.73
STAG3L4-201ENST00000352103 ATP1B4Q9UN42 357 aaPredicted RBP10.51□□□□□ -0.73
STAG3L4-201ENST00000352103 EEA1Q15075 1411 aa10.5□□□□□ -0.73
STAG3L4-201ENST00000352103 LRRIQ1Q96JM4 1722 aa10.5□□□□□ -0.73
STAG3L4-201ENST00000352103 SPAG9O60271 1321 aaKnown RBP10.49□□□□□ -0.73
STAG3L4-201ENST00000352103 CDC42BPAQ5VT25 1732 aa10.49□□□□□ -0.73
STAG3L4-201ENST00000352103 MED14O60244 1454 aa10.49□□□□□ -0.73
STAG3L4-201ENST00000352103 POTEAQ6S8J7 498 aa10.48□□□□□ -0.73
STAG3L4-201ENST00000352103 A2MP01023 1474 aa10.48□□□□□ -0.73
STAG3L4-201ENST00000352103 ARHGAP35Q9NRY4 1499 aa10.48□□□□□ -0.73
STAG3L4-201ENST00000352103 GGT6Q6P531 493 aa10.47□□□□□ -0.73
STAG3L4-201ENST00000352103 ANKLE2Q86XL3 938 aa10.47□□□□□ -0.73
STAG3L4-201ENST00000352103 STRCP1A6NGW2 1772 aa10.47□□□□□ -0.73
STAG3L4-201ENST00000352103 ATP7AQ04656 1500 aa10.46□□□□□ -0.74
STAG3L4-201ENST00000352103 LRRC7Q96NW7 1537 aa10.46□□□□□ -0.74
STAG3L4-201ENST00000352103 DEPDC5O75140 1603 aa10.45□□□□□ -0.74
STAG3L4-201ENST00000352103 INO80Q9ULG1 1556 aaPredicted RBP10.45□□□□□ -0.74
STAG3L4-201ENST00000352103 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
STAG3L4-201ENST00000352103 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
STAG3L4-201ENST00000352103 NPHP4O75161 1426 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms