RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 RSPH6AQ9H0K4 717 aa9.8□□□□□ -0.84
ATR-201ENST00000350721 LAS1LQ9Y4W2 734 aaKnown RBP9.8□□□□□ -0.84
ATR-201ENST00000350721 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
ATR-201ENST00000350721 WDR97A6NE52 1622 aa9.79□□□□□ -0.84
ATR-201ENST00000350721 TMF1P82094 1093 aa9.78□□□□□ -0.84
ATR-201ENST00000350721 IGF1RP08069 1367 aa9.78□□□□□ -0.84
ATR-201ENST00000350721 CCDC7Q96M83 1385 aa9.78□□□□□ -0.84
ATR-201ENST00000350721 MYBBP1AQ9BQG0 1328 aaKnown RBP9.78□□□□□ -0.84
ATR-201ENST00000350721 ANKRD30AQ9BXX3 1397 aa9.77□□□□□ -0.84
ATR-201ENST00000350721 NCAPD3P42695 1498 aa9.77□□□□□ -0.85
ATR-201ENST00000350721 GSE1Q14687 1217 aa9.77□□□□□ -0.85
ATR-201ENST00000350721 CFAP53Q96M91 514 aa9.77□□□□□ -0.85
ATR-201ENST00000350721 FHOD3Q2V2M9 1422 aa9.77□□□□□ -0.85
ATR-201ENST00000350721 RSPH4AQ5TD94 716 aa9.77□□□□□ -0.85
ATR-201ENST00000350721 WASHC2AQ641Q2 1341 aa9.77□□□□□ -0.85
ATR-201ENST00000350721 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
ATR-201ENST00000350721 MAPK8IP3Q9UPT6 1336 aa9.76□□□□□ -0.85
ATR-201ENST00000350721 AAMPQ13685 434 aa9.76□□□□□ -0.85
ATR-201ENST00000350721 CENPQQ7L2Z9 268 aaPredicted RBP9.76□□□□□ -0.85
ATR-201ENST00000350721 PDE4AP27815 886 aa9.75□□□□□ -0.85
ATR-201ENST00000350721 HMGXB3Q12766 1538 aa9.75□□□□□ -0.85
ATR-201ENST00000350721 MYH16Q9H6N6 1097 aa9.75□□□□□ -0.85
ATR-201ENST00000350721 ARID3CA6NKF2 412 aa9.75□□□□□ -0.85
ATR-201ENST00000350721 AQRO60306 1485 aaKnown RBP eCLIP9.75□□□□□ -0.851e-6■■■■□ 26.3
ATR-201ENST00000350721 TNNT2P45379 298 aaPredicted RBP9.74□□□□□ -0.85
ATR-201ENST00000350721 PNNQ9H307 717 aaKnown RBP9.74□□□□□ -0.85
ATR-201ENST00000350721 MIA2Q96PC5 1412 aa9.74□□□□□ -0.85
ATR-201ENST00000350721 BRD4O60885 1362 aaPredicted RBP9.74□□□□□ -0.85
ATR-201ENST00000350721 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
ATR-201ENST00000350721 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
ATR-201ENST00000350721 RRP1P56182 461 aaKnown RBP9.74□□□□□ -0.85
ATR-201ENST00000350721 CFTRP13569 1480 aa9.74□□□□□ -0.85
ATR-201ENST00000350721 USP47Q96K76 1375 aa9.73□□□□□ -0.85
ATR-201ENST00000350721 SUPT6HQ7KZ85 1726 aaKnown RBP9.73□□□□□ -0.85
ATR-201ENST00000350721 FBLN2P98095 1184 aa9.73□□□□□ -0.85
ATR-201ENST00000350721 SMG6Q86US8 1419 aaKnown RBP9.72□□□□□ -0.85
ATR-201ENST00000350721 FAM161AQ3B820 660 aa9.72□□□□□ -0.85
ATR-201ENST00000350721 RGS3P49796 1198 aa9.72□□□□□ -0.85
ATR-201ENST00000350721 DCAF11Q8TEB1 546 aa9.71□□□□□ -0.85
ATR-201ENST00000350721 PKD2Q13563 968 aa9.71□□□□□ -0.85
ATR-201ENST00000350721 PDS5BQ9NTI5 1447 aa9.71□□□□□ -0.85
ATR-201ENST00000350721 EIF3AQ14152 1382 aaKnown RBP9.71□□□□□ -0.85
ATR-201ENST00000350721 CGNL1Q0VF96 1302 aa9.71□□□□□ -0.85
ATR-201ENST00000350721 FTSJ3Q8IY81 847 aaKnown RBP9.71□□□□□ -0.86
ATR-201ENST00000350721 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
ATR-201ENST00000350721 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
ATR-201ENST00000350721 NCLP19338 710 aaKnown RBP9.7□□□□□ -0.86
ATR-201ENST00000350721 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
ATR-201ENST00000350721 NAP1L5Q96NT1 182 aaPredicted RBP9.7□□□□□ -0.86
ATR-201ENST00000350721 EHBP1L1Q8N3D4 1523 aa9.7□□□□□ -0.86
ATR-201ENST00000350721 GBP4Q96PP9 640 aa9.69□□□□□ -0.86
ATR-201ENST00000350721 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
ATR-201ENST00000350721 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
ATR-201ENST00000350721 HSCBQ8IWL3 235 aa9.69□□□□□ -0.86
ATR-201ENST00000350721 NUP155O75694 1391 aa9.69□□□□□ -0.86
ATR-201ENST00000350721 PMFBP1Q8TBY8 1022 aa9.69□□□□□ -0.86
ATR-201ENST00000350721 AKNAQ7Z591 1439 aa9.69□□□□□ -0.86
ATR-201ENST00000350721 CARMIL2Q6F5E8 1435 aa9.68□□□□□ -0.86
ATR-201ENST00000350721 KIF7Q2M1P5 1343 aa9.68□□□□□ -0.86
ATR-201ENST00000350721 NCOA2Q15596 1464 aa9.68□□□□□ -0.86
ATR-201ENST00000350721 ISY1Q9ULR0 285 aaKnown RBP9.68□□□□□ -0.86
ATR-201ENST00000350721 RWDD1Q9H446 243 aaPredicted RBP9.67□□□□□ -0.86
ATR-201ENST00000350721 CASC1Q6TDU7 716 aa9.66□□□□□ -0.86
ATR-201ENST00000350721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATR-201ENST00000350721 NAIPQ13075 1403 aa9.65□□□□□ -0.86
ATR-201ENST00000350721 GOLGA6L3A6NEY3 463 aa9.65□□□□□ -0.86
ATR-201ENST00000350721 RGL3Q3MIN7 710 aa9.65□□□□□ -0.86
ATR-201ENST00000350721 CUL7Q14999 1698 aa9.65□□□□□ -0.86
ATR-201ENST00000350721 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.87
ATR-201ENST00000350721 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
ATR-201ENST00000350721 UNC13AQ9UPW8 1703 aa9.64□□□□□ -0.87
ATR-201ENST00000350721 FANCD2Q9BXW9 1451 aa9.64□□□□□ -0.87
ATR-201ENST00000350721 MSNP26038 577 aaKnown RBP9.64□□□□□ -0.87
ATR-201ENST00000350721 MAPKBP1O60336 1514 aa9.63□□□□□ -0.87
ATR-201ENST00000350721 BACH2Q9BYV9 841 aa9.63□□□□□ -0.87
ATR-201ENST00000350721 CCDC144AA2RUR9 1427 aa9.63□□□□□ -0.87
ATR-201ENST00000350721 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
ATR-201ENST00000350721 SKOR2Q2VWA4 1001 aaPredicted RBP9.63□□□□□ -0.87
ATR-201ENST00000350721 PLEKHH2Q8IVE3 1493 aa9.62□□□□□ -0.87
ATR-201ENST00000350721 ST20-MTHFSA0A0A6YYL1 179 aa9.62□□□□□ -0.87
ATR-201ENST00000350721 PNISRQ8TF01 805 aaKnown RBP9.62□□□□□ -0.87
ATR-201ENST00000350721 THOC2Q8NI27 1593 aaKnown RBP9.62□□□□□ -0.87
ATR-201ENST00000350721 E9PSI1 815 aa9.62□□□□□ -0.87
ATR-201ENST00000350721 CC2D1BQ5T0F9 858 aaKnown RBP9.62□□□□□ -0.87
ATR-201ENST00000350721 NCOA1Q15788 1441 aa9.62□□□□□ -0.87
ATR-201ENST00000350721 ARXQ96QS3 562 aa9.62□□□□□ -0.87
ATR-201ENST00000350721 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
ATR-201ENST00000350721 CC2D2AQ9P2K1 1620 aa9.61□□□□□ -0.87
ATR-201ENST00000350721 NINLQ9Y2I6 1382 aa9.61□□□□□ -0.87
ATR-201ENST00000350721 FOXD1Q16676 465 aa9.61□□□□□ -0.87
ATR-201ENST00000350721 GAPVD1Q14C86 1478 aa9.6□□□□□ -0.87
ATR-201ENST00000350721 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
ATR-201ENST00000350721 KANK1Q14678 1352 aa9.6□□□□□ -0.87
ATR-201ENST00000350721 NFKBIBQ15653 356 aa9.6□□□□□ -0.87
ATR-201ENST00000350721 EXOC6Q8TAG9 804 aa9.6□□□□□ -0.87
ATR-201ENST00000350721 FRAT1Q92837 279 aaPredicted RBP9.6□□□□□ -0.87
ATR-201ENST00000350721 HSP90AA2PQ14568 343 aaPredicted RBP9.6□□□□□ -0.87
ATR-201ENST00000350721 CENPJQ9HC77 1338 aaPredicted RBP9.59□□□□□ -0.87
ATR-201ENST00000350721 MSH5O43196 834 aa9.59□□□□□ -0.87
ATR-201ENST00000350721 CALD1Q05682 793 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms