RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 NCOA2Q15596 1464 aa21.79■■□□□ 1.08
SEC13-202ENST00000350697 EFCAB2Q5VUJ9 269 aa21.79■■□□□ 1.08
SEC13-202ENST00000350697 ARHGAP5Q13017 1502 aa21.78■■□□□ 1.08
SEC13-202ENST00000350697 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
SEC13-202ENST00000350697 GPATCH8Q9UKJ3 1502 aaKnown RBP21.78■■□□□ 1.08
SEC13-202ENST00000350697 AKNAQ7Z591 1439 aa21.76■■□□□ 1.07
SEC13-202ENST00000350697 COL17A1Q9UMD9 1497 aaPredicted RBP21.75■■□□□ 1.07
SEC13-202ENST00000350697 ITSN2Q9NZM3 1697 aa21.73■■□□□ 1.07
SEC13-202ENST00000350697 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
SEC13-202ENST00000350697 ADGRL1O94910 1474 aa21.71■■□□□ 1.07
SEC13-202ENST00000350697 DENND4BO75064 1496 aaPredicted RBP21.68■■□□□ 1.06
SEC13-202ENST00000350697 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
SEC13-202ENST00000350697 ZNF777Q9ULD5 760 aaPredicted RBP21.67■■□□□ 1.06
SEC13-202ENST00000350697 RAPGEF3O95398 923 aa21.64■■□□□ 1.06
SEC13-202ENST00000350697 SAMD9LQ8IVG5 1584 aa21.64■■□□□ 1.06
SEC13-202ENST00000350697 MYOM3Q5VTT5 1437 aa21.64■■□□□ 1.05
SEC13-202ENST00000350697 ABCC1P33527 1531 aa21.63■■□□□ 1.05
SEC13-202ENST00000350697 RICTORQ6R327 1708 aa21.63■■□□□ 1.05
SEC13-202ENST00000350697 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
SEC13-202ENST00000350697 POGZQ7Z3K3 1410 aa21.62■■□□□ 1.05
SEC13-202ENST00000350697 FRMPD1Q5SYB0 1578 aa21.61■■□□□ 1.05
SEC13-202ENST00000350697 MIA2Q96PC5 1412 aa21.61■■□□□ 1.05
SEC13-202ENST00000350697 KIAA1107Q9UPP5 1409 aa21.6■■□□□ 1.05
SEC13-202ENST00000350697 ARHGEF12Q9NZN5 1544 aa21.59■■□□□ 1.05
SEC13-202ENST00000350697 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
SEC13-202ENST00000350697 ZNF644Q9H582 1327 aaPredicted RBP21.58■■□□□ 1.05
SEC13-202ENST00000350697 SYCP2Q9BX26 1530 aa21.57■■□□□ 1.04
SEC13-202ENST00000350697 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
SEC13-202ENST00000350697 CAMSAP2Q08AD1 1489 aa21.56■■□□□ 1.04
SEC13-202ENST00000350697 ZMYM4Q5VZL5 1548 aa21.56■■□□□ 1.04
SEC13-202ENST00000350697 HNRNPMP52272 730 aaKnown RBP eCLIP21.55■■□□□ 1.04
SEC13-202ENST00000350697 TRAPPC8Q9Y2L5 1435 aa21.55■■□□□ 1.04
SEC13-202ENST00000350697 AFAP1Q8N556 730 aa21.55■■□□□ 1.04
SEC13-202ENST00000350697 KDM5CP41229 1560 aa21.54■■□□□ 1.04
SEC13-202ENST00000350697 FGD6Q6ZV73 1430 aa21.53■■□□□ 1.04
SEC13-202ENST00000350697 MAGI2Q86UL8 1455 aa21.52■■□□□ 1.03
SEC13-202ENST00000350697 MBD5Q9P267 1494 aa21.52■■□□□ 1.03
SEC13-202ENST00000350697 PTPN23Q9H3S7 1636 aa21.5■■□□□ 1.03
SEC13-202ENST00000350697 RSPH4AQ5TD94 716 aa21.48■■□□□ 1.03
SEC13-202ENST00000350697 MLH3Q9UHC1 1453 aa21.48■■□□□ 1.03
SEC13-202ENST00000350697 ZFYVE16Q7Z3T8 1539 aa21.48■■□□□ 1.03
SEC13-202ENST00000350697 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
SEC13-202ENST00000350697 TCOF1Q13428 1488 aaKnown RBP21.47■■□□□ 1.03
SEC13-202ENST00000350697 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
SEC13-202ENST00000350697 CCDC141Q6ZP82 1450 aa21.46■■□□□ 1.03
SEC13-202ENST00000350697 ARHGEF40Q8TER5 1519 aa21.46■■□□□ 1.03
SEC13-202ENST00000350697 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
SEC13-202ENST00000350697 SPAG9O60271 1321 aaKnown RBP21.46■■□□□ 1.03
SEC13-202ENST00000350697 YEATS2Q9ULM3 1422 aa21.45■■□□□ 1.03
SEC13-202ENST00000350697 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
SEC13-202ENST00000350697 ATP7AQ04656 1500 aa21.41■■□□□ 1.02
SEC13-202ENST00000350697 INO80Q9ULG1 1556 aaPredicted RBP21.4■■□□□ 1.02
SEC13-202ENST00000350697 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
SEC13-202ENST00000350697 TSPY4P0CV99 314 aa21.39■■□□□ 1.02
SEC13-202ENST00000350697 TSPY10P0CW01 314 aa21.39■■□□□ 1.02
SEC13-202ENST00000350697 ATP10AO60312 1499 aa21.39■■□□□ 1.02
SEC13-202ENST00000350697 RTEL1-TNFRSF6BF6WH68 1400 aa21.39■■□□□ 1.01
SEC13-202ENST00000350697 DIP2CQ9Y2E4 1556 aa21.38■■□□□ 1.01
SEC13-202ENST00000350697 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
SEC13-202ENST00000350697 DNMT1P26358 1616 aaKnown RBP21.37■■□□□ 1.01
SEC13-202ENST00000350697 C9orf84Q5VXU9 1444 aa21.37■■□□□ 1.01
SEC13-202ENST00000350697 ABCC5O15440 1437 aa21.36■■□□□ 1.01
SEC13-202ENST00000350697 DAPK1P53355 1430 aa21.36■■□□□ 1.01
SEC13-202ENST00000350697 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
SEC13-202ENST00000350697 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
SEC13-202ENST00000350697 MAST1Q9Y2H9 1570 aa21.35■■□□□ 1.01
SEC13-202ENST00000350697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.34■■□□□ 1.011e-6■■■■□ 25.4
SEC13-202ENST00000350697 SHANK2Q9UPX8 1470 aa21.34■■□□□ 1.01
SEC13-202ENST00000350697 CROCC2H7BZ55 1655 aa21.34■■□□□ 1.01
SEC13-202ENST00000350697 REREQ9P2R6 1566 aa21.33■■□□□ 1.01
SEC13-202ENST00000350697 ARID4BQ4LE39 1312 aaPredicted RBP21.31■■□□□ 1
SEC13-202ENST00000350697 ADGBQ8N7X0 1667 aa21.3■■□□□ 1
SEC13-202ENST00000350697 SIGLEC1Q9BZZ2 1709 aa21.29■■□□□ 1
SEC13-202ENST00000350697 A2MP01023 1474 aa21.28■■□□□ 1
SEC13-202ENST00000350697 PLXNC1O60486 1568 aa21.27■□□□□ 0.99
SEC13-202ENST00000350697 AGLP35573 1532 aa21.26■□□□□ 0.99
SEC13-202ENST00000350697 DHX29Q7Z478 1369 aaKnown RBP21.25■□□□□ 0.99
SEC13-202ENST00000350697 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
SEC13-202ENST00000350697 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
SEC13-202ENST00000350697 BCORL1Q5H9F3 1711 aa21.23■□□□□ 0.99
SEC13-202ENST00000350697 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
SEC13-202ENST00000350697 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
SEC13-202ENST00000350697 ITGAEP38570 1179 aa21.21■□□□□ 0.99
SEC13-202ENST00000350697 NCOA1Q15788 1441 aa21.21■□□□□ 0.99
SEC13-202ENST00000350697 KIF15Q9NS87 1388 aa21.21■□□□□ 0.99
SEC13-202ENST00000350697 KDM4FA0A1W2PPD8 638 aa21.21■□□□□ 0.99
SEC13-202ENST00000350697 RRP7BPQ9NSQ0 103 aa21.2■□□□□ 0.98
SEC13-202ENST00000350697 DUOX2Q9NRD8 1548 aa21.19■□□□□ 0.98
SEC13-202ENST00000350697 MLECQ14165 292 aa21.19■□□□□ 0.98
SEC13-202ENST00000350697 ADAMTSL3P82987 1691 aa21.18■□□□□ 0.98
SEC13-202ENST00000350697 ROCK1Q13464 1354 aa21.17■□□□□ 0.98
SEC13-202ENST00000350697 EIF2AK4Q9P2K8 1649 aaKnown RBP21.14■□□□□ 0.97
SEC13-202ENST00000350697 ERBINQ96RT1 1412 aa21.13■□□□□ 0.97
SEC13-202ENST00000350697 KIF3BO15066 747 aa21.13■□□□□ 0.97
SEC13-202ENST00000350697 MADDQ8WXG6 1647 aa21.13■□□□□ 0.97
SEC13-202ENST00000350697 GGT6Q6P531 493 aa21.11■□□□□ 0.97
SEC13-202ENST00000350697 FER1L4A9Z1Z3 1794 aa21.11■□□□□ 0.97
SEC13-202ENST00000350697 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
SEC13-202ENST00000350697 ANKRD50Q9ULJ7 1429 aa21.08■□□□□ 0.96
SEC13-202ENST00000350697 RNF17Q9BXT8 1623 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms