RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
RLIM-202ENST00000349225 POLR1AO95602 1720 aaPredicted RBP19.17■□□□□ 0.66
RLIM-202ENST00000349225 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
RLIM-202ENST00000349225 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
RLIM-202ENST00000349225 CNGB1Q14028 1251 aaPredicted RBP19.16■□□□□ 0.66
RLIM-202ENST00000349225 BACH2Q9BYV9 841 aa19.16■□□□□ 0.66
RLIM-202ENST00000349225 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
RLIM-202ENST00000349225 HECW1Q76N89 1606 aa19.14■□□□□ 0.66
RLIM-202ENST00000349225 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
RLIM-202ENST00000349225 FOXD1Q16676 465 aa19.14■□□□□ 0.65
RLIM-202ENST00000349225 EXOC6Q8TAG9 804 aa19.14■□□□□ 0.65
RLIM-202ENST00000349225 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
RLIM-202ENST00000349225 GSE1Q14687 1217 aa19.12■□□□□ 0.65
RLIM-202ENST00000349225 SKAP1Q86WV1 359 aa19.12■□□□□ 0.65
RLIM-202ENST00000349225 TCERG1O14776 1098 aaKnown RBP19.11■□□□□ 0.65
RLIM-202ENST00000349225 EIF5BO60841 1220 aaKnown RBP19.1■□□□□ 0.65
RLIM-202ENST00000349225 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
RLIM-202ENST00000349225 NESP48681 1621 aa19.1■□□□□ 0.65
RLIM-202ENST00000349225 PPM1GO15355 546 aaPredicted RBP19.09■□□□□ 0.65
RLIM-202ENST00000349225 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
RLIM-202ENST00000349225 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.64
RLIM-202ENST00000349225 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
RLIM-202ENST00000349225 NFKBIBQ15653 356 aa19.07■□□□□ 0.64
RLIM-202ENST00000349225 PNISRQ8TF01 805 aaKnown RBP19.07■□□□□ 0.64
RLIM-202ENST00000349225 CHIC2Q9UKJ5 165 aa19.07■□□□□ 0.64
RLIM-202ENST00000349225 GCC2Q8IWJ2 1684 aa19.07■□□□□ 0.64
RLIM-202ENST00000349225 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
RLIM-202ENST00000349225 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
RLIM-202ENST00000349225 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
RLIM-202ENST00000349225 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
RLIM-202ENST00000349225 TARBP1Q13395 1621 aaKnown RBP19.05■□□□□ 0.64
RLIM-202ENST00000349225 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
RLIM-202ENST00000349225 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
RLIM-202ENST00000349225 SLC4A3P48751 1232 aa19.04■□□□□ 0.64
RLIM-202ENST00000349225 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
RLIM-202ENST00000349225 EFCAB5A4FU69 1503 aa19.03■□□□□ 0.64
RLIM-202ENST00000349225 MS4A1P11836 297 aa19.01■□□□□ 0.63
RLIM-202ENST00000349225 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
RLIM-202ENST00000349225 RPRD2Q5VT52 1461 aaKnown RBP18.99■□□□□ 0.63
RLIM-202ENST00000349225 WDR62O43379 1518 aa18.98■□□□□ 0.63
RLIM-202ENST00000349225 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
RLIM-202ENST00000349225 MAGI3Q5TCQ9 1506 aa18.97■□□□□ 0.63
RLIM-202ENST00000349225 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
RLIM-202ENST00000349225 LRPPRCP42704 1394 aaKnown RBP18.96■□□□□ 0.63
RLIM-202ENST00000349225 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
RLIM-202ENST00000349225 SUPT6HQ7KZ85 1726 aaKnown RBP18.96■□□□□ 0.63
RLIM-202ENST00000349225 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
RLIM-202ENST00000349225 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
RLIM-202ENST00000349225 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
RLIM-202ENST00000349225 RCAN3Q9UKA8 241 aa18.94■□□□□ 0.62
RLIM-202ENST00000349225 CUL7Q14999 1698 aa18.94■□□□□ 0.62
RLIM-202ENST00000349225 POLR3GLQ9BT43 218 aa18.93■□□□□ 0.62
RLIM-202ENST00000349225 CTTNBP2Q8WZ74 1663 aa18.93■□□□□ 0.62
RLIM-202ENST00000349225 GRIN2BQ13224 1484 aa18.91■□□□□ 0.62
RLIM-202ENST00000349225 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
RLIM-202ENST00000349225 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
RLIM-202ENST00000349225 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
RLIM-202ENST00000349225 PLIN1O60240 522 aa18.9■□□□□ 0.62
RLIM-202ENST00000349225 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
RLIM-202ENST00000349225 FRAT2O75474 233 aaPredicted RBP18.9■□□□□ 0.62
RLIM-202ENST00000349225 DDRGK1Q96HY6 314 aa18.89■□□□□ 0.61
RLIM-202ENST00000349225 FAM43AQ8N2R8 423 aa18.88■□□□□ 0.61
RLIM-202ENST00000349225 RSPH6AQ9H0K4 717 aa18.88■□□□□ 0.61
RLIM-202ENST00000349225 EHBP1L1Q8N3D4 1523 aa18.88■□□□□ 0.61
RLIM-202ENST00000349225 CDCA7LQ96GN5 454 aa18.87■□□□□ 0.61
RLIM-202ENST00000349225 USP47Q96K76 1375 aa18.86■□□□□ 0.61
RLIM-202ENST00000349225 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
RLIM-202ENST00000349225 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
RLIM-202ENST00000349225 KDM5CP41229 1560 aa18.84■□□□□ 0.61
RLIM-202ENST00000349225 SAMD9Q5K651 1589 aa18.83■□□□□ 0.61
RLIM-202ENST00000349225 PKNOX2Q96KN3 472 aa18.83■□□□□ 0.61
RLIM-202ENST00000349225 CRBNQ96SW2 442 aa18.83■□□□□ 0.6
RLIM-202ENST00000349225 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
RLIM-202ENST00000349225 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
RLIM-202ENST00000349225 RRAGDQ9NQL2 400 aaPredicted RBP18.82■□□□□ 0.6
RLIM-202ENST00000349225 C8orf34Q49A92 452 aa18.8■□□□□ 0.6
RLIM-202ENST00000349225 C20orf194Q5TEA3 1177 aa18.8■□□□□ 0.6
RLIM-202ENST00000349225 BRD4O60885 1362 aaPredicted RBP18.79■□□□□ 0.6
RLIM-202ENST00000349225 KDM2BQ8NHM5 1336 aa18.79■□□□□ 0.6
RLIM-202ENST00000349225 MYBBP1AQ9BQG0 1328 aaKnown RBP18.77■□□□□ 0.6
RLIM-202ENST00000349225 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
RLIM-202ENST00000349225 ZNF326Q5BKZ1 582 aaKnown RBP18.76■□□□□ 0.59
RLIM-202ENST00000349225 POGKQ9P215 609 aa18.75■□□□□ 0.59
RLIM-202ENST00000349225 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
RLIM-202ENST00000349225 KIF14Q15058 1648 aa18.74■□□□□ 0.59
RLIM-202ENST00000349225 ARID4BQ4LE39 1312 aaPredicted RBP18.73■□□□□ 0.59
RLIM-202ENST00000349225 E9PCH4 1651 aa18.72■□□□□ 0.59
RLIM-202ENST00000349225 PZPP20742 1482 aa18.72■□□□□ 0.59
RLIM-202ENST00000349225 PDE3BQ13370 1112 aa18.7■□□□□ 0.58
RLIM-202ENST00000349225 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
RLIM-202ENST00000349225 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
RLIM-202ENST00000349225 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
RLIM-202ENST00000349225 DAPK1P53355 1430 aa18.68■□□□□ 0.58
RLIM-202ENST00000349225 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
RLIM-202ENST00000349225 RALBP1Q15311 655 aa18.67■□□□□ 0.58
RLIM-202ENST00000349225 KTN1Q86UP2 1357 aaKnown RBP18.67■□□□□ 0.58
RLIM-202ENST00000349225 ABCC5O15440 1437 aa18.66■□□□□ 0.58
RLIM-202ENST00000349225 ROCK1Q13464 1354 aa18.65■□□□□ 0.58
RLIM-202ENST00000349225 ZMYND15Q9H091 742 aa18.65■□□□□ 0.58
RLIM-202ENST00000349225 USP19O94966 1318 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms