RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 NUP160Q12769 1436 aa12.36□□□□□ -0.43
AC008543.1-201ENST00000344893 TIAM1Q13009 1591 aa12.36□□□□□ -0.43
AC008543.1-201ENST00000344893 PKNOX2Q96KN3 472 aa12.36□□□□□ -0.43
AC008543.1-201ENST00000344893 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
AC008543.1-201ENST00000344893 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
AC008543.1-201ENST00000344893 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
AC008543.1-201ENST00000344893 FOXD1Q16676 465 aa12.35□□□□□ -0.43
AC008543.1-201ENST00000344893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.34□□□□□ -0.43
AC008543.1-201ENST00000344893 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
AC008543.1-201ENST00000344893 B4GALNT3Q6L9W6 998 aa12.33□□□□□ -0.44
AC008543.1-201ENST00000344893 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
AC008543.1-201ENST00000344893 HNRNPUQ00839 825 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC008543.1-201ENST00000344893 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
AC008543.1-201ENST00000344893 NUP153P49790 1475 aaKnown RBP12.31□□□□□ -0.44
AC008543.1-201ENST00000344893 IPO9Q96P70 1041 aaKnown RBP12.31□□□□□ -0.44
AC008543.1-201ENST00000344893 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
AC008543.1-201ENST00000344893 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
AC008543.1-201ENST00000344893 UGGT2Q9NYU1 1516 aa12.3□□□□□ -0.44
AC008543.1-201ENST00000344893 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
AC008543.1-201ENST00000344893 HIRIP3Q9BW71 556 aaPredicted RBP12.29□□□□□ -0.44
AC008543.1-201ENST00000344893 SAMD9Q5K651 1589 aa12.28□□□□□ -0.44
AC008543.1-201ENST00000344893 MAGI3Q5TCQ9 1506 aa12.28□□□□□ -0.44
AC008543.1-201ENST00000344893 RAB3GAP2Q9H2M9 1393 aa12.28□□□□□ -0.44
AC008543.1-201ENST00000344893 WASHC2AQ641Q2 1341 aa12.27□□□□□ -0.44
AC008543.1-201ENST00000344893 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.45
AC008543.1-201ENST00000344893 TSPY4P0CV99 314 aa12.26□□□□□ -0.45
AC008543.1-201ENST00000344893 TSPY10P0CW01 314 aa12.26□□□□□ -0.45
AC008543.1-201ENST00000344893 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
AC008543.1-201ENST00000344893 CCDC18Q5T9S5 1454 aa12.26□□□□□ -0.45
AC008543.1-201ENST00000344893 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
AC008543.1-201ENST00000344893 PLPPR3Q6T4P5 718 aa12.26□□□□□ -0.45
AC008543.1-201ENST00000344893 ATP10BO94823 1461 aa12.25□□□□□ -0.45
AC008543.1-201ENST00000344893 ZNF326Q5BKZ1 582 aaKnown RBP12.25□□□□□ -0.45
AC008543.1-201ENST00000344893 ARHGEF11O15085 1522 aa12.25□□□□□ -0.45
AC008543.1-201ENST00000344893 HECW1Q76N89 1606 aa12.24□□□□□ -0.45
AC008543.1-201ENST00000344893 BRPF3Q9ULD4 1205 aa12.24□□□□□ -0.45
AC008543.1-201ENST00000344893 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
AC008543.1-201ENST00000344893 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
AC008543.1-201ENST00000344893 NEFMP07197 916 aa12.22□□□□□ -0.45
AC008543.1-201ENST00000344893 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
AC008543.1-201ENST00000344893 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
AC008543.1-201ENST00000344893 WASHC2CQ9Y4E1 1318 aa12.21□□□□□ -0.45
AC008543.1-201ENST00000344893 TIMELESSQ9UNS1 1208 aa12.21□□□□□ -0.46
AC008543.1-201ENST00000344893 RRBP1Q9P2E9 1410 aaKnown RBP12.21□□□□□ -0.46
AC008543.1-201ENST00000344893 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
AC008543.1-201ENST00000344893 CNGB1Q14028 1251 aaPredicted RBP12.2□□□□□ -0.46
AC008543.1-201ENST00000344893 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
AC008543.1-201ENST00000344893 LAS1LQ9Y4W2 734 aaKnown RBP12.19□□□□□ -0.46
AC008543.1-201ENST00000344893 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
AC008543.1-201ENST00000344893 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
AC008543.1-201ENST00000344893 SETD5Q9C0A6 1442 aa12.18□□□□□ -0.46
AC008543.1-201ENST00000344893 USP35Q9P2H5 1018 aa12.18□□□□□ -0.46
AC008543.1-201ENST00000344893 FAM69CQ0P6D2 419 aa12.17□□□□□ -0.46
AC008543.1-201ENST00000344893 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
AC008543.1-201ENST00000344893 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
AC008543.1-201ENST00000344893 EFCAB2Q5VUJ9 269 aa12.15□□□□□ -0.46
AC008543.1-201ENST00000344893 KIF14Q15058 1648 aa12.15□□□□□ -0.46
AC008543.1-201ENST00000344893 SUPT6HQ7KZ85 1726 aaKnown RBP12.14□□□□□ -0.47
AC008543.1-201ENST00000344893 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
AC008543.1-201ENST00000344893 RAPGEF3O95398 923 aa12.14□□□□□ -0.47
AC008543.1-201ENST00000344893 POLR3GLQ9BT43 218 aa12.13□□□□□ -0.47
AC008543.1-201ENST00000344893 CFAP43Q8NDM7 1665 aa12.13□□□□□ -0.47
AC008543.1-201ENST00000344893 MLECQ14165 292 aa12.13□□□□□ -0.47
AC008543.1-201ENST00000344893 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
AC008543.1-201ENST00000344893 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
AC008543.1-201ENST00000344893 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
AC008543.1-201ENST00000344893 RGL3Q3MIN7 710 aa12.12□□□□□ -0.47
AC008543.1-201ENST00000344893 ARHGAP5Q13017 1502 aa12.12□□□□□ -0.47
AC008543.1-201ENST00000344893 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
AC008543.1-201ENST00000344893 GPATCH8Q9UKJ3 1502 aaKnown RBP12.11□□□□□ -0.47
AC008543.1-201ENST00000344893 GGT6Q6P531 493 aa12.1□□□□□ -0.47
AC008543.1-201ENST00000344893 GSE1Q14687 1217 aa12.1□□□□□ -0.47
AC008543.1-201ENST00000344893 MAP3K1Q13233 1512 aa12.1□□□□□ -0.47
AC008543.1-201ENST00000344893 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
AC008543.1-201ENST00000344893 PTPN23Q9H3S7 1636 aa12.09□□□□□ -0.47
AC008543.1-201ENST00000344893 MPHOSPH9Q99550 1183 aa12.09□□□□□ -0.47
AC008543.1-201ENST00000344893 PPM1GO15355 546 aaPredicted RBP12.09□□□□□ -0.47
AC008543.1-201ENST00000344893 PKD2Q13563 968 aa12.09□□□□□ -0.47
AC008543.1-201ENST00000344893 PODXL2Q9NZ53 605 aa12.09□□□□□ -0.47
AC008543.1-201ENST00000344893 ASXL2Q76L83 1435 aa12.08□□□□□ -0.48
AC008543.1-201ENST00000344893 ABCA8O94911 1581 aa12.08□□□□□ -0.48
AC008543.1-201ENST00000344893 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
AC008543.1-201ENST00000344893 CLASP1Q7Z460 1538 aa12.08□□□□□ -0.48
AC008543.1-201ENST00000344893 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
AC008543.1-201ENST00000344893 SPAG9O60271 1321 aaKnown RBP12.07□□□□□ -0.48
AC008543.1-201ENST00000344893 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
AC008543.1-201ENST00000344893 ABCC5O15440 1437 aa12.07□□□□□ -0.48
AC008543.1-201ENST00000344893 KIF3BO15066 747 aa12.07□□□□□ -0.48
AC008543.1-201ENST00000344893 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
AC008543.1-201ENST00000344893 NUP155O75694 1391 aa12.06□□□□□ -0.48
AC008543.1-201ENST00000344893 DAPK1P53355 1430 aa12.06□□□□□ -0.48
AC008543.1-201ENST00000344893 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
AC008543.1-201ENST00000344893 NAIPQ13075 1403 aa12.05□□□□□ -0.48
AC008543.1-201ENST00000344893 CCDC184Q52MB2 194 aa12.04□□□□□ -0.48
AC008543.1-201ENST00000344893 FAM9BQ8IZU0 186 aa12.04□□□□□ -0.48
AC008543.1-201ENST00000344893 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
AC008543.1-201ENST00000344893 KIF15Q9NS87 1388 aa12.03□□□□□ -0.48
AC008543.1-201ENST00000344893 FRAT1Q92837 279 aaPredicted RBP12.03□□□□□ -0.48
AC008543.1-201ENST00000344893 SCAPERQ9BY12 1400 aa12.03□□□□□ -0.48
AC008543.1-201ENST00000344893 FAM43AQ8N2R8 423 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms