RNA–Protein interactions for RNA: ENST00000343526.8

TRIM24-201, Transcript of tripartite motif containing 24, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM24, Length 8,410 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24-201ENST00000343526 SOX12O15370 315 aa20.94■□□□□ 0.94
TRIM24-201ENST00000343526 SYAP1Q96A49 352 aaPredicted RBP20.94■□□□□ 0.94
TRIM24-201ENST00000343526 GPATCH3Q96I76 525 aa20.93■□□□□ 0.94
TRIM24-201ENST00000343526 PATL2C9JE40 543 aaKnown RBP20.93■□□□□ 0.94
TRIM24-201ENST00000343526 TSR1Q2NL82 804 aaKnown RBP20.93■□□□□ 0.94
TRIM24-201ENST00000343526 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
TRIM24-201ENST00000343526 PES1O00541 588 aaKnown RBP20.91■□□□□ 0.94
TRIM24-201ENST00000343526 CHMP3Q9Y3E7 222 aa20.91■□□□□ 0.94
TRIM24-201ENST00000343526 ARID3AQ99856 593 aa20.91■□□□□ 0.94
TRIM24-201ENST00000343526 PTMSP20962 102 aa20.9■□□□□ 0.94
TRIM24-201ENST00000343526 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.94
TRIM24-201ENST00000343526 FRAT2O75474 233 aaPredicted RBP20.88■□□□□ 0.93
TRIM24-201ENST00000343526 SPRYD3Q8NCJ5 442 aa20.86■□□□□ 0.93
TRIM24-201ENST00000343526 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRIM24-201ENST00000343526 TPD52L1Q16890 204 aaPredicted RBP20.86■□□□□ 0.93
TRIM24-201ENST00000343526 CTDP1Q9Y5B0 961 aaPredicted RBP20.86■□□□□ 0.93
TRIM24-201ENST00000343526 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
TRIM24-201ENST00000343526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.85■□□□□ 0.939e-7■■■■■ 90.9
TRIM24-201ENST00000343526 CCDC70Q6NSX1 233 aa20.85■□□□□ 0.93
TRIM24-201ENST00000343526 CSB-PGBD3P0DP91 1061 aa20.84■□□□□ 0.93
TRIM24-201ENST00000343526 TPM2P07951 284 aa20.83■□□□□ 0.93
TRIM24-201ENST00000343526 CSPP1Q1MSJ5 1256 aa20.83■□□□□ 0.92
TRIM24-201ENST00000343526 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.92
TRIM24-201ENST00000343526 TRIM34Q9BYJ4 488 aa20.81■□□□□ 0.92
TRIM24-201ENST00000343526 PAK3O75914 559 aaPredicted RBP20.81■□□□□ 0.92
TRIM24-201ENST00000343526 GBP4Q96PP9 640 aa20.81■□□□□ 0.92
TRIM24-201ENST00000343526 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
TRIM24-201ENST00000343526 GTF2E1P29083 439 aaPredicted RBP20.8■□□□□ 0.92
TRIM24-201ENST00000343526 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
TRIM24-201ENST00000343526 APBB1O00213 710 aa20.78■□□□□ 0.92
TRIM24-201ENST00000343526 CSRNP3Q8WYN3 585 aa20.78■□□□□ 0.92
TRIM24-201ENST00000343526 NOP58Q9Y2X3 529 aaKnown RBP20.75■□□□□ 0.91
TRIM24-201ENST00000343526 TPM1P09493 284 aa20.74■□□□□ 0.91
TRIM24-201ENST00000343526 SRPK2P78362 688 aaKnown RBP20.74■□□□□ 0.91
TRIM24-201ENST00000343526 CHMP4AQ9BY43 222 aa20.74■□□□□ 0.91
TRIM24-201ENST00000343526 RRP7BPQ9NSQ0 103 aa20.74■□□□□ 0.91
TRIM24-201ENST00000343526 PHF14O94880 888 aa20.73■□□□□ 0.91
TRIM24-201ENST00000343526 TOMM22Q9NS69 142 aa20.73■□□□□ 0.91
TRIM24-201ENST00000343526 CARD11Q9BXL7 1154 aa20.72■□□□□ 0.91
TRIM24-201ENST00000343526 PLEKHD1A6NEE1 506 aa20.71■□□□□ 0.91
TRIM24-201ENST00000343526 ODF2Q5BJF6 829 aa20.71■□□□□ 0.91
TRIM24-201ENST00000343526 KIF3AQ9Y496 699 aa20.7■□□□□ 0.9
TRIM24-201ENST00000343526 SF3A1Q15459 793 aaKnown RBP20.7■□□□□ 0.9
TRIM24-201ENST00000343526 TRIM6-TRIM34B2RNG4 842 aa20.7■□□□□ 0.9
TRIM24-201ENST00000343526 GPS2Q13227 327 aa20.7■□□□□ 0.9
TRIM24-201ENST00000343526 CC2D1BQ5T0F9 858 aaKnown RBP20.69■□□□□ 0.9
TRIM24-201ENST00000343526 CCAR2Q8N163 923 aaKnown RBP20.69■□□□□ 0.9
TRIM24-201ENST00000343526 IPO8O15397 1037 aaKnown RBP20.68■□□□□ 0.9
TRIM24-201ENST00000343526 AKAP17AQ02040 695 aaKnown RBP20.68■□□□□ 0.9
TRIM24-201ENST00000343526 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
TRIM24-201ENST00000343526 CCDC43Q96MW1 224 aaKnown RBP20.68■□□□□ 0.9
TRIM24-201ENST00000343526 RAD21O60216 631 aa20.68■□□□□ 0.9
TRIM24-201ENST00000343526 AMOTL1Q8IY63 956 aa20.68■□□□□ 0.9
TRIM24-201ENST00000343526 SUPT16HQ9Y5B9 1047 aaKnown RBP20.67■□□□□ 0.9
TRIM24-201ENST00000343526 SPAG9O60271 1321 aaKnown RBP20.67■□□□□ 0.9
TRIM24-201ENST00000343526 PAF1Q8N7H5 531 aa20.67■□□□□ 0.9
TRIM24-201ENST00000343526 CALD1Q05682 793 aaKnown RBP20.67■□□□□ 0.9
TRIM24-201ENST00000343526 NOL10Q9BSC4 688 aaKnown RBP20.66■□□□□ 0.9
TRIM24-201ENST00000343526 KANK1Q14678 1352 aa20.65■□□□□ 0.9
TRIM24-201ENST00000343526 MSH5O43196 834 aa20.64■□□□□ 0.9
TRIM24-201ENST00000343526 HMMRO75330 724 aa20.64■□□□□ 0.89
TRIM24-201ENST00000343526 R3HCC1Q9Y3T6 440 aaKnown RBP20.64■□□□□ 0.89
TRIM24-201ENST00000343526 MLECQ14165 292 aa20.62■□□□□ 0.89
TRIM24-201ENST00000343526 GZF1Q9H116 711 aaPredicted RBP20.62■□□□□ 0.89
TRIM24-201ENST00000343526 CT47A1Q5JQC4 288 aaPredicted RBP20.62■□□□□ 0.89
TRIM24-201ENST00000343526 PPP4R2Q9NY27 417 aa20.62■□□□□ 0.89
TRIM24-201ENST00000343526 PCMTD1Q96MG8 357 aaPredicted RBP20.62■□□□□ 0.89
TRIM24-201ENST00000343526 IPO7O95373 1038 aaKnown RBP20.62■□□□□ 0.89
TRIM24-201ENST00000343526 KIF16BQ96L93 1317 aa20.61■□□□□ 0.89
TRIM24-201ENST00000343526 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
TRIM24-201ENST00000343526 H3BQV1 296 aa20.59■□□□□ 0.89
TRIM24-201ENST00000343526 IFFO2Q5TF58 517 aa20.59■□□□□ 0.89
TRIM24-201ENST00000343526 APPP05067 770 aa20.58■□□□□ 0.88
TRIM24-201ENST00000343526 GOLGA6L19H0YKK7 550 aa20.58■□□□□ 0.88
TRIM24-201ENST00000343526 STK31Q9BXU1 1019 aa20.57■□□□□ 0.88
TRIM24-201ENST00000343526 WWC2Q6AWC2 1192 aa20.56■□□□□ 0.88
TRIM24-201ENST00000343526 RDXP35241 583 aaKnown RBP20.56■□□□□ 0.88
TRIM24-201ENST00000343526 MORC1Q86VD1 984 aa20.55■□□□□ 0.88
TRIM24-201ENST00000343526 ANKRD20A12PQ8NF67 263 aa20.55■□□□□ 0.88
TRIM24-201ENST00000343526 HDGFL2Q7Z4V5 671 aaPredicted RBP20.54■□□□□ 0.88
TRIM24-201ENST00000343526 B4GALNT3Q6L9W6 998 aa20.54■□□□□ 0.88
TRIM24-201ENST00000343526 CCDC47Q96A33 483 aaKnown RBP20.53■□□□□ 0.88
TRIM24-201ENST00000343526 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRIM24-201ENST00000343526 STK11IPQ8N1F8 1099 aa20.53■□□□□ 0.88
TRIM24-201ENST00000343526 CDR1P51861 262 aa20.52■□□□□ 0.88
TRIM24-201ENST00000343526 TMF1P82094 1093 aa20.52■□□□□ 0.88
TRIM24-201ENST00000343526 SYNE3Q6ZMZ3 975 aa20.52■□□□□ 0.88
TRIM24-201ENST00000343526 RUFY1Q96T51 708 aa20.52■□□□□ 0.87
TRIM24-201ENST00000343526 CHMP4CQ96CF2 233 aa20.51■□□□□ 0.87
TRIM24-201ENST00000343526 ZFYVE27Q5T4F4 411 aa20.51■□□□□ 0.87
TRIM24-201ENST00000343526 ITPRIPQ8IWB1 547 aa20.51■□□□□ 0.87
TRIM24-201ENST00000343526 MAP7D2Q96T17 732 aa20.51■□□□□ 0.87
TRIM24-201ENST00000343526 CFDP1Q9UEE9 299 aaPredicted RBP20.51■□□□□ 0.87
TRIM24-201ENST00000343526 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
TRIM24-201ENST00000343526 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
TRIM24-201ENST00000343526 FAM184AQ8NB25 1140 aa20.49■□□□□ 0.87
TRIM24-201ENST00000343526 ZRSR2Q15696 482 aaKnown RBP20.49■□□□□ 0.87
TRIM24-201ENST00000343526 LRRFIP1Q32MZ4 808 aaKnown RBP20.48■□□□□ 0.87
TRIM24-201ENST00000343526 KLHL34Q8N239 644 aa20.48■□□□□ 0.87
TRIM24-201ENST00000343526 EPS15P42566 896 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms