RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 A0A0G2JS52 829 aa10.4□□□□□ -0.74
UBE4B-202ENST00000343090 VSIG10Q8N0Z9 540 aa10.4□□□□□ -0.74
UBE4B-202ENST00000343090 NUP155O75694 1391 aa10.4□□□□□ -0.75
UBE4B-202ENST00000343090 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.75
UBE4B-202ENST00000343090 MSH5O43196 834 aa10.4□□□□□ -0.75
UBE4B-202ENST00000343090 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
UBE4B-202ENST00000343090 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
UBE4B-202ENST00000343090 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
UBE4B-202ENST00000343090 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
UBE4B-202ENST00000343090 RCAN3Q9UKA8 241 aa10.38□□□□□ -0.75
UBE4B-202ENST00000343090 GOLGA6L22H0YM25 854 aa10.37□□□□□ -0.75
UBE4B-202ENST00000343090 MORC1Q86VD1 984 aa10.37□□□□□ -0.75
UBE4B-202ENST00000343090 SMARCA4P51532 1647 aa10.37□□□□□ -0.75
UBE4B-202ENST00000343090 SOX12O15370 315 aa10.36□□□□□ -0.75
UBE4B-202ENST00000343090 HNRNPMP52272 730 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBE4B-202ENST00000343090 SRPK2P78362 688 aaKnown RBP10.36□□□□□ -0.75
UBE4B-202ENST00000343090 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
UBE4B-202ENST00000343090 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
UBE4B-202ENST00000343090 ATAD2BQ9ULI0 1458 aa10.35□□□□□ -0.75
UBE4B-202ENST00000343090 STK26Q9P289 416 aa10.35□□□□□ -0.75
UBE4B-202ENST00000343090 GGT6Q6P531 493 aa10.35□□□□□ -0.75
UBE4B-202ENST00000343090 L1TD1Q5T7N2 865 aaKnown RBP10.35□□□□□ -0.75
UBE4B-202ENST00000343090 PNNQ9H307 717 aaKnown RBP10.34□□□□□ -0.75
UBE4B-202ENST00000343090 KANK1Q14678 1352 aa10.34□□□□□ -0.75
UBE4B-202ENST00000343090 MLECQ14165 292 aa10.34□□□□□ -0.75
UBE4B-202ENST00000343090 GSE1Q14687 1217 aa10.33□□□□□ -0.76
UBE4B-202ENST00000343090 HSP90AB1P08238 724 aaKnown RBP10.33□□□□□ -0.76
UBE4B-202ENST00000343090 CASC1Q6TDU7 716 aa10.33□□□□□ -0.76
UBE4B-202ENST00000343090 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
UBE4B-202ENST00000343090 RALBP1Q15311 655 aa10.33□□□□□ -0.76
UBE4B-202ENST00000343090 ANKRD30AQ9BXX3 1397 aa10.33□□□□□ -0.76
UBE4B-202ENST00000343090 HSP90AA2PQ14568 343 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-202ENST00000343090 LMOD2Q6P5Q4 547 aa10.32□□□□□ -0.76
UBE4B-202ENST00000343090 CCDC146Q8IYE0 955 aa10.32□□□□□ -0.76
UBE4B-202ENST00000343090 PDS5BQ9NTI5 1447 aa10.31□□□□□ -0.76
UBE4B-202ENST00000343090 TCERG1O14776 1098 aaKnown RBP10.31□□□□□ -0.76
UBE4B-202ENST00000343090 PTMAP06454 111 aaKnown RBP10.31□□□□□ -0.76
UBE4B-202ENST00000343090 CARMIL2Q6F5E8 1435 aa10.3□□□□□ -0.76
UBE4B-202ENST00000343090 PAK3O75914 559 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-202ENST00000343090 ST20-MTHFSA0A0A6YYL1 179 aa10.29□□□□□ -0.76
UBE4B-202ENST00000343090 U2AF1L5P0DN76 240 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-202ENST00000343090 U2AF1Q01081 240 aaKnown RBP eCLIP10.29□□□□□ -0.764e-6■□□□□ 8.9
UBE4B-202ENST00000343090 APBB1O00213 710 aa10.29□□□□□ -0.76
UBE4B-202ENST00000343090 MS4A1P11836 297 aa10.29□□□□□ -0.76
UBE4B-202ENST00000343090 NUTM2DQ5VT03 806 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-202ENST00000343090 TAOK2Q9UL54 1235 aa10.29□□□□□ -0.76
UBE4B-202ENST00000343090 SLKQ9H2G2 1235 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-202ENST00000343090 HSCBQ8IWL3 235 aa10.27□□□□□ -0.76
UBE4B-202ENST00000343090 PRKRIP1Q9H875 184 aaPredicted RBP10.27□□□□□ -0.76
UBE4B-202ENST00000343090 BRPF3Q9ULD4 1205 aa10.27□□□□□ -0.76
UBE4B-202ENST00000343090 PLCB2Q00722 1185 aa10.27□□□□□ -0.77
UBE4B-202ENST00000343090 PLIN1O60240 522 aa10.27□□□□□ -0.77
UBE4B-202ENST00000343090 CCDC18Q5T9S5 1454 aa10.26□□□□□ -0.77
UBE4B-202ENST00000343090 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
UBE4B-202ENST00000343090 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
UBE4B-202ENST00000343090 KIF3BO15066 747 aa10.26□□□□□ -0.77
UBE4B-202ENST00000343090 OS9Q13438 667 aaPredicted RBP10.26□□□□□ -0.77
UBE4B-202ENST00000343090 DNTTIP2Q5QJE6 756 aaKnown RBP10.26□□□□□ -0.77
UBE4B-202ENST00000343090 ITPRIPQ8IWB1 547 aa10.26□□□□□ -0.77
UBE4B-202ENST00000343090 UBE2Q2Q8WVN8 375 aa10.26□□□□□ -0.77
UBE4B-202ENST00000343090 EFCAB2Q5VUJ9 269 aa10.25□□□□□ -0.77
UBE4B-202ENST00000343090 GOLGA2Q08379 1002 aa10.25□□□□□ -0.77
UBE4B-202ENST00000343090 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-202ENST00000343090 GZF1Q9H116 711 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-202ENST00000343090 KIF21BO75037 1637 aa10.24□□□□□ -0.77
UBE4B-202ENST00000343090 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
UBE4B-202ENST00000343090 CHMP4BQ9H444 224 aaKnown RBP10.24□□□□□ -0.77
UBE4B-202ENST00000343090 PANK3Q9H999 370 aa10.24□□□□□ -0.77
UBE4B-202ENST00000343090 PDE4AP27815 886 aa10.23□□□□□ -0.77
UBE4B-202ENST00000343090 IGF1RP08069 1367 aa10.23□□□□□ -0.77
UBE4B-202ENST00000343090 RRP7AQ9Y3A4 280 aaKnown RBP10.23□□□□□ -0.77
UBE4B-202ENST00000343090 PHLDB1Q86UU1 1377 aa10.23□□□□□ -0.77
UBE4B-202ENST00000343090 EXOC6Q8TAG9 804 aa10.23□□□□□ -0.77
UBE4B-202ENST00000343090 ARID3AQ99856 593 aa10.23□□□□□ -0.77
UBE4B-202ENST00000343090 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
UBE4B-202ENST00000343090 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
UBE4B-202ENST00000343090 MYBBP1AQ9BQG0 1328 aaKnown RBP10.22□□□□□ -0.77
UBE4B-202ENST00000343090 KIF15Q9NS87 1388 aa10.22□□□□□ -0.77
UBE4B-202ENST00000343090 HDGFL2Q7Z4V5 671 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-202ENST00000343090 KCNJ4P48050 445 aa10.21□□□□□ -0.77
UBE4B-202ENST00000343090 USP47Q96K76 1375 aa10.21□□□□□ -0.77
UBE4B-202ENST00000343090 MFAP1P55081 439 aaKnown RBP10.21□□□□□ -0.78
UBE4B-202ENST00000343090 RWDD1Q9H446 243 aaPredicted RBP10.21□□□□□ -0.78
UBE4B-202ENST00000343090 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
UBE4B-202ENST00000343090 GOLGA6L3A6NEY3 463 aa10.2□□□□□ -0.78
UBE4B-202ENST00000343090 SMC4Q9NTJ3 1288 aa10.2□□□□□ -0.78
UBE4B-202ENST00000343090 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
UBE4B-202ENST00000343090 TRAK1Q9UPV9 953 aa10.2□□□□□ -0.78
UBE4B-202ENST00000343090 ZRSR1Q15695 479 aaKnown RBP10.2□□□□□ -0.78
UBE4B-202ENST00000343090 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
UBE4B-202ENST00000343090 IPO8O15397 1037 aaKnown RBP10.2□□□□□ -0.78
UBE4B-202ENST00000343090 NAP1L2Q9ULW6 460 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-202ENST00000343090 SPAG9O60271 1321 aaKnown RBP10.19□□□□□ -0.78
UBE4B-202ENST00000343090 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
UBE4B-202ENST00000343090 MSNP26038 577 aaKnown RBP10.19□□□□□ -0.78
UBE4B-202ENST00000343090 BCL2L13Q9BXK5 485 aa10.19□□□□□ -0.78
UBE4B-202ENST00000343090 CDK11BP21127 795 aaKnown RBP10.19□□□□□ -0.78
UBE4B-202ENST00000343090 CENPJQ9HC77 1338 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-202ENST00000343090 PDE3BQ13370 1112 aa10.19□□□□□ -0.78
UBE4B-202ENST00000343090 AMER1Q5JTC6 1135 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms