RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 IRX6P78412 446 aaPredicted RBP25.76■■□□□ 1.71
SEMA6C-201ENST00000341697 NESP48681 1621 aa25.76■■□□□ 1.71
SEMA6C-201ENST00000341697 HSP90AA1P07900 732 aaKnown RBP25.75■■□□□ 1.71
SEMA6C-201ENST00000341697 NEUROD2Q15784 382 aa25.74■■□□□ 1.71
SEMA6C-201ENST00000341697 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
SEMA6C-201ENST00000341697 SENP3-EIF4A1A0A087X0R7 540 aa25.73■■□□□ 1.71
SEMA6C-201ENST00000341697 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
SEMA6C-201ENST00000341697 ROCK2O75116 1388 aaKnown RBP25.72■■□□□ 1.71
SEMA6C-201ENST00000341697 U2SURPO15042 1029 aaKnown RBP25.69■■□□□ 1.7
SEMA6C-201ENST00000341697 PNNQ9H307 717 aaKnown RBP25.67■■□□□ 1.7
SEMA6C-201ENST00000341697 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
SEMA6C-201ENST00000341697 LAS1LQ9Y4W2 734 aaKnown RBP25.64■■□□□ 1.7
SEMA6C-201ENST00000341697 HDGFL2Q7Z4V5 671 aaPredicted RBP25.63■■□□□ 1.69
SEMA6C-201ENST00000341697 L3MBTL2Q969R5 705 aa25.63■■□□□ 1.69
SEMA6C-201ENST00000341697 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
SEMA6C-201ENST00000341697 EID1Q9Y6B2 187 aa25.6■■□□□ 1.69
SEMA6C-201ENST00000341697 EIF3AQ14152 1382 aaKnown RBP25.59■■□□□ 1.69
SEMA6C-201ENST00000341697 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
SEMA6C-201ENST00000341697 TOPBP1Q92547 1522 aa25.58■■□□□ 1.69
SEMA6C-201ENST00000341697 SOX12O15370 315 aa25.57■■□□□ 1.68
SEMA6C-201ENST00000341697 FTSJ3Q8IY81 847 aaKnown RBP25.57■■□□□ 1.68
SEMA6C-201ENST00000341697 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
SEMA6C-201ENST00000341697 ARXQ96QS3 562 aa25.55■■□□□ 1.68
SEMA6C-201ENST00000341697 KTN1Q86UP2 1357 aaKnown RBP25.54■■□□□ 1.68
SEMA6C-201ENST00000341697 SUPT16HQ9Y5B9 1047 aaKnown RBP25.53■■□□□ 1.68
SEMA6C-201ENST00000341697 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
SEMA6C-201ENST00000341697 CCER2I3L3R5 266 aa25.52■■□□□ 1.68
SEMA6C-201ENST00000341697 CCDC144AA2RUR9 1427 aa25.51■■□□□ 1.68
SEMA6C-201ENST00000341697 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
SEMA6C-201ENST00000341697 NUTM2DQ5VT03 806 aaPredicted RBP25.5■■□□□ 1.67
SEMA6C-201ENST00000341697 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
SEMA6C-201ENST00000341697 KIF21BO75037 1637 aa25.5■■□□□ 1.67
SEMA6C-201ENST00000341697 FAM69CQ0P6D2 419 aa25.5■■□□□ 1.67
SEMA6C-201ENST00000341697 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
SEMA6C-201ENST00000341697 CUX1P39880 1505 aa25.48■■□□□ 1.67
SEMA6C-201ENST00000341697 CASKIN1Q8WXD9 1431 aa25.47■■□□□ 1.67
SEMA6C-201ENST00000341697 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
SEMA6C-201ENST00000341697 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
SEMA6C-201ENST00000341697 FGD6Q6ZV73 1430 aa25.44■■□□□ 1.66
SEMA6C-201ENST00000341697 PAK3O75914 559 aaPredicted RBP25.44■■□□□ 1.66
SEMA6C-201ENST00000341697 FRAT1Q92837 279 aaPredicted RBP25.44■■□□□ 1.66
SEMA6C-201ENST00000341697 DHX57Q6P158 1386 aaKnown RBP25.43■■□□□ 1.66
SEMA6C-201ENST00000341697 RALBP1Q15311 655 aa25.43■■□□□ 1.66
SEMA6C-201ENST00000341697 UACAQ9BZF9 1416 aa25.43■■□□□ 1.66
SEMA6C-201ENST00000341697 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
SEMA6C-201ENST00000341697 MS4A1P11836 297 aa25.42■■□□□ 1.66
SEMA6C-201ENST00000341697 TERF2IPQ9NYB0 399 aa25.42■■□□□ 1.66
SEMA6C-201ENST00000341697 CHMP4BQ9H444 224 aaKnown RBP25.41■■□□□ 1.66
SEMA6C-201ENST00000341697 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
SEMA6C-201ENST00000341697 LRRC9Q6ZRR7 1453 aa25.4■■□□□ 1.66
SEMA6C-201ENST00000341697 VGFO15240 615 aaPredicted RBP25.38■■□□□ 1.65
SEMA6C-201ENST00000341697 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
SEMA6C-201ENST00000341697 TRAK1Q9UPV9 953 aa25.36■■□□□ 1.65
SEMA6C-201ENST00000341697 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
SEMA6C-201ENST00000341697 PRXQ9BXM0 1461 aa25.35■■□□□ 1.65
SEMA6C-201ENST00000341697 FYCO1Q9BQS8 1478 aa25.35■■□□□ 1.65
SEMA6C-201ENST00000341697 PHLDB1Q86UU1 1377 aa25.35■■□□□ 1.65
SEMA6C-201ENST00000341697 RTF1Q92541 710 aaKnown RBP25.35■■□□□ 1.65
SEMA6C-201ENST00000341697 KIF15Q9NS87 1388 aa25.34■■□□□ 1.65
SEMA6C-201ENST00000341697 LAMC3Q9Y6N6 1575 aa25.33■■□□□ 1.65
SEMA6C-201ENST00000341697 NCOA2Q15596 1464 aa25.33■■□□□ 1.65
SEMA6C-201ENST00000341697 U2AF1L5P0DN76 240 aaPredicted RBP25.33■■□□□ 1.65
SEMA6C-201ENST00000341697 U2AF1Q01081 240 aaKnown RBP eCLIP25.33■■□□□ 1.65
SEMA6C-201ENST00000341697 ARAP1Q96P48 1450 aa25.31■■□□□ 1.64
SEMA6C-201ENST00000341697 ANP32BQ92688 251 aaKnown RBP25.31■■□□□ 1.64
SEMA6C-201ENST00000341697 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
SEMA6C-201ENST00000341697 NGDNQ8NEJ9 315 aaKnown RBP25.3■■□□□ 1.64
SEMA6C-201ENST00000341697 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
SEMA6C-201ENST00000341697 PPP4R2Q9NY27 417 aa25.28■■□□□ 1.64
SEMA6C-201ENST00000341697 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
SEMA6C-201ENST00000341697 CSB-PGBD3P0DP91 1061 aa25.27■■□□□ 1.64
SEMA6C-201ENST00000341697 CASC1Q6TDU7 716 aa25.25■■□□□ 1.63
SEMA6C-201ENST00000341697 ARHGAP5Q13017 1502 aa25.24■■□□□ 1.63
SEMA6C-201ENST00000341697 NPHP1O15259 732 aa25.24■■□□□ 1.63
SEMA6C-201ENST00000341697 CALD1Q05682 793 aaKnown RBP25.23■■□□□ 1.63
SEMA6C-201ENST00000341697 ANKRD50Q9ULJ7 1429 aa25.23■■□□□ 1.63
SEMA6C-201ENST00000341697 EIF5BO60841 1220 aaKnown RBP25.23■■□□□ 1.63
SEMA6C-201ENST00000341697 BECN1Q14457 450 aa25.22■■□□□ 1.63
SEMA6C-201ENST00000341697 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
SEMA6C-201ENST00000341697 NUTM2FA1L443 756 aa25.2■■□□□ 1.63
SEMA6C-201ENST00000341697 AFAP1Q8N556 730 aa25.2■■□□□ 1.62
SEMA6C-201ENST00000341697 NLRP13Q86W25 1043 aa25.19■■□□□ 1.62
SEMA6C-201ENST00000341697 DDRGK1Q96HY6 314 aa25.19■■□□□ 1.62
SEMA6C-201ENST00000341697 OS9Q13438 667 aaPredicted RBP25.19■■□□□ 1.62
SEMA6C-201ENST00000341697 EVC2Q86UK5 1308 aa25.17■■□□□ 1.62
SEMA6C-201ENST00000341697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.16■■□□□ 1.62
SEMA6C-201ENST00000341697 RGS3P49796 1198 aa25.15■■□□□ 1.62
SEMA6C-201ENST00000341697 KIAA0586Q9BVV6 1533 aa25.15■■□□□ 1.62
SEMA6C-201ENST00000341697 USP47Q96K76 1375 aa25.14■■□□□ 1.62
SEMA6C-201ENST00000341697 STAC3Q96MF2 364 aa25.14■■□□□ 1.62
SEMA6C-201ENST00000341697 PANK3Q9H999 370 aa25.13■■□□□ 1.61
SEMA6C-201ENST00000341697 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.13■■□□□ 1.61
SEMA6C-201ENST00000341697 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
SEMA6C-201ENST00000341697 AMPHP49418 695 aa25.12■■□□□ 1.61
SEMA6C-201ENST00000341697 TROQ12816 1431 aaPredicted RBP25.11■■□□□ 1.61
SEMA6C-201ENST00000341697 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
SEMA6C-201ENST00000341697 EHBP1L1Q8N3D4 1523 aa25.1■■□□□ 1.61
SEMA6C-201ENST00000341697 MINK1Q8N4C8 1332 aaPredicted RBP25.08■■□□□ 1.61
SEMA6C-201ENST00000341697 HECW1Q76N89 1606 aa25.07■■□□□ 1.6
SEMA6C-201ENST00000341697 CHMP4AQ9BY43 222 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms