RNA–Protein interactions for RNA: ENST00000341329.7

RHBDD1-201, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD1, Length 4,883 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-201ENST00000341329 CUX1P39880 1505 aa15.53■□□□□ 0.08
RHBDD1-201ENST00000341329 NLRP13Q86W25 1043 aa15.52■□□□□ 0.08
RHBDD1-201ENST00000341329 IGF1RP08069 1367 aa15.52■□□□□ 0.07
RHBDD1-201ENST00000341329 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
RHBDD1-201ENST00000341329 RGS3P49796 1198 aa15.51■□□□□ 0.07
RHBDD1-201ENST00000341329 KIF15Q9NS87 1388 aa15.51■□□□□ 0.07
RHBDD1-201ENST00000341329 EIF3AQ14152 1382 aaKnown RBP15.5■□□□□ 0.07
RHBDD1-201ENST00000341329 ZBED9Q6R2W3 1325 aa15.5■□□□□ 0.07
RHBDD1-201ENST00000341329 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
RHBDD1-201ENST00000341329 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
RHBDD1-201ENST00000341329 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
RHBDD1-201ENST00000341329 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
RHBDD1-201ENST00000341329 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
RHBDD1-201ENST00000341329 UACAQ9BZF9 1416 aa15.48■□□□□ 0.07
RHBDD1-201ENST00000341329 L1TD1Q5T7N2 865 aaKnown RBP15.48■□□□□ 0.07
RHBDD1-201ENST00000341329 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
RHBDD1-201ENST00000341329 FOXD1Q16676 465 aa15.48■□□□□ 0.07
RHBDD1-201ENST00000341329 FRAT1Q92837 279 aaPredicted RBP15.48■□□□□ 0.07
RHBDD1-201ENST00000341329 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
RHBDD1-201ENST00000341329 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
RHBDD1-201ENST00000341329 PRKRIP1Q9H875 184 aaPredicted RBP15.46■□□□□ 0.07
RHBDD1-201ENST00000341329 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
RHBDD1-201ENST00000341329 ARXQ96QS3 562 aa15.45■□□□□ 0.06
RHBDD1-201ENST00000341329 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
RHBDD1-201ENST00000341329 EFCAB2Q5VUJ9 269 aa15.45■□□□□ 0.06
RHBDD1-201ENST00000341329 MORC1Q86VD1 984 aa15.45■□□□□ 0.06
RHBDD1-201ENST00000341329 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
RHBDD1-201ENST00000341329 POGKQ9P215 609 aa15.44■□□□□ 0.06
RHBDD1-201ENST00000341329 FANCIQ9NVI1 1328 aa15.44■□□□□ 0.06
RHBDD1-201ENST00000341329 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
RHBDD1-201ENST00000341329 CASKIN1Q8WXD9 1431 aa15.44■□□□□ 0.06
RHBDD1-201ENST00000341329 PTMSP20962 102 aa15.43■□□□□ 0.06
RHBDD1-201ENST00000341329 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
RHBDD1-201ENST00000341329 HSCBQ8IWL3 235 aa15.42■□□□□ 0.06
RHBDD1-201ENST00000341329 USP35Q9P2H5 1018 aa15.42■□□□□ 0.06
RHBDD1-201ENST00000341329 IPO8O15397 1037 aaKnown RBP15.41■□□□□ 0.06
RHBDD1-201ENST00000341329 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
RHBDD1-201ENST00000341329 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
RHBDD1-201ENST00000341329 GOLGA2Q08379 1002 aa15.4■□□□□ 0.06
RHBDD1-201ENST00000341329 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
RHBDD1-201ENST00000341329 RWDD1Q9H446 243 aaPredicted RBP15.4■□□□□ 0.06
RHBDD1-201ENST00000341329 HSP90AB1P08238 724 aaKnown RBP15.39■□□□□ 0.05
RHBDD1-201ENST00000341329 CALD1Q05682 793 aaKnown RBP15.39■□□□□ 0.05
RHBDD1-201ENST00000341329 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
RHBDD1-201ENST00000341329 NGEFQ8N5V2 710 aa15.38■□□□□ 0.05
RHBDD1-201ENST00000341329 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
RHBDD1-201ENST00000341329 EFCAB5A4FU69 1503 aa15.37■□□□□ 0.05
RHBDD1-201ENST00000341329 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
RHBDD1-201ENST00000341329 HDGFP51858 240 aaKnown RBP15.36■□□□□ 0.05
RHBDD1-201ENST00000341329 CCDC144AA2RUR9 1427 aa15.36■□□□□ 0.05
RHBDD1-201ENST00000341329 USP47Q96K76 1375 aa15.36■□□□□ 0.05
RHBDD1-201ENST00000341329 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
RHBDD1-201ENST00000341329 GAPVD1Q14C86 1478 aa15.35■□□□□ 0.05
RHBDD1-201ENST00000341329 CNTLNQ9NXG0 1405 aa15.35■□□□□ 0.05
RHBDD1-201ENST00000341329 CFTRP13569 1480 aa15.34■□□□□ 0.05
RHBDD1-201ENST00000341329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.34■□□□□ 0.05
RHBDD1-201ENST00000341329 STAC3Q96MF2 364 aa15.34■□□□□ 0.05
RHBDD1-201ENST00000341329 CCDC7Q96M83 1385 aa15.33■□□□□ 0.04
RHBDD1-201ENST00000341329 TNNT2P45379 298 aaPredicted RBP15.33■□□□□ 0.04
RHBDD1-201ENST00000341329 PTMAP06454 111 aaKnown RBP15.33■□□□□ 0.04
RHBDD1-201ENST00000341329 MIA2Q96PC5 1412 aa15.33■□□□□ 0.04
RHBDD1-201ENST00000341329 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
RHBDD1-201ENST00000341329 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
RHBDD1-201ENST00000341329 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
RHBDD1-201ENST00000341329 JPH4Q96JJ6 628 aa15.3■□□□□ 0.04
RHBDD1-201ENST00000341329 RRP1P56182 461 aaKnown RBP15.3■□□□□ 0.04
RHBDD1-201ENST00000341329 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
RHBDD1-201ENST00000341329 GBP4Q96PP9 640 aa15.3■□□□□ 0.04
RHBDD1-201ENST00000341329 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
RHBDD1-201ENST00000341329 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
RHBDD1-201ENST00000341329 MCCP23508 829 aa15.29■□□□□ 0.04
RHBDD1-201ENST00000341329 HNRNPMP52272 730 aaKnown RBP eCLIP15.28■□□□□ 0.04
RHBDD1-201ENST00000341329 CENPJQ9HC77 1338 aaPredicted RBP15.28■□□□□ 0.04
RHBDD1-201ENST00000341329 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.04
RHBDD1-201ENST00000341329 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.03
RHBDD1-201ENST00000341329 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
RHBDD1-201ENST00000341329 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
RHBDD1-201ENST00000341329 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
RHBDD1-201ENST00000341329 CHMP4AQ9BY43 222 aa15.25■□□□□ 0.03
RHBDD1-201ENST00000341329 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
RHBDD1-201ENST00000341329 HFM1A2PYH4 1435 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 EHBP1L1Q8N3D4 1523 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 E9PSI1 815 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 PDE4AP27815 886 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 CGNL1Q0VF96 1302 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 TERF2IPQ9NYB0 399 aa15.24■□□□□ 0.03
RHBDD1-201ENST00000341329 KIF7Q2M1P5 1343 aa15.23■□□□□ 0.03
RHBDD1-201ENST00000341329 PANK3Q9H999 370 aa15.23■□□□□ 0.03
RHBDD1-201ENST00000341329 BRD4O60885 1362 aaPredicted RBP15.23■□□□□ 0.03
RHBDD1-201ENST00000341329 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
RHBDD1-201ENST00000341329 AAMPQ13685 434 aa15.22■□□□□ 0.03
RHBDD1-201ENST00000341329 DNTTIP2Q5QJE6 756 aaKnown RBP15.22■□□□□ 0.03
RHBDD1-201ENST00000341329 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
RHBDD1-201ENST00000341329 RTN4Q9NQC3 1192 aaKnown RBP15.2■□□□□ 0.02
RHBDD1-201ENST00000341329 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
RHBDD1-201ENST00000341329 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
RHBDD1-201ENST00000341329 MSNP26038 577 aaKnown RBP15.2■□□□□ 0.02
RHBDD1-201ENST00000341329 ITPRIPQ8IWB1 547 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms