RNA–Protein interactions for RNA: ENST00000339420.6

ZDHHC3-202, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 2

Gene ZDHHC3, Length 3,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-202ENST00000339420 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.19
ZDHHC3-202ENST00000339420 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.2
ZDHHC3-202ENST00000339420 PDE4AP27815 886 aa13.83□□□□□ -0.2
ZDHHC3-202ENST00000339420 NAIPQ13075 1403 aa13.82□□□□□ -0.2
ZDHHC3-202ENST00000339420 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
ZDHHC3-202ENST00000339420 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
ZDHHC3-202ENST00000339420 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
ZDHHC3-202ENST00000339420 PLIN1O60240 522 aa13.8□□□□□ -0.2
ZDHHC3-202ENST00000339420 SMG6Q86US8 1419 aaKnown RBP13.78□□□□□ -0.2
ZDHHC3-202ENST00000339420 URB2Q14146 1524 aaKnown RBP13.78□□□□□ -0.2
ZDHHC3-202ENST00000339420 NESP48681 1621 aa13.78□□□□□ -0.2
ZDHHC3-202ENST00000339420 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.2
ZDHHC3-202ENST00000339420 KDM5BQ9UGL1 1544 aa13.77□□□□□ -0.2
ZDHHC3-202ENST00000339420 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
ZDHHC3-202ENST00000339420 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
ZDHHC3-202ENST00000339420 NCOA1Q15788 1441 aa13.76□□□□□ -0.21
ZDHHC3-202ENST00000339420 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
ZDHHC3-202ENST00000339420 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
ZDHHC3-202ENST00000339420 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
ZDHHC3-202ENST00000339420 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
ZDHHC3-202ENST00000339420 ARXQ96QS3 562 aa13.74□□□□□ -0.21
ZDHHC3-202ENST00000339420 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
ZDHHC3-202ENST00000339420 SAMD9Q5K651 1589 aa13.73□□□□□ -0.21
ZDHHC3-202ENST00000339420 PPM1GO15355 546 aaPredicted RBP13.73□□□□□ -0.21
ZDHHC3-202ENST00000339420 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
ZDHHC3-202ENST00000339420 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
ZDHHC3-202ENST00000339420 FYCO1Q9BQS8 1478 aa13.72□□□□□ -0.21
ZDHHC3-202ENST00000339420 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
ZDHHC3-202ENST00000339420 GSE1Q14687 1217 aa13.72□□□□□ -0.21
ZDHHC3-202ENST00000339420 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.21
ZDHHC3-202ENST00000339420 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
ZDHHC3-202ENST00000339420 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.21
ZDHHC3-202ENST00000339420 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
ZDHHC3-202ENST00000339420 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.22
ZDHHC3-202ENST00000339420 CDCA7LQ96GN5 454 aa13.71□□□□□ -0.22
ZDHHC3-202ENST00000339420 PBRM1Q86U86 1689 aa13.7□□□□□ -0.22
ZDHHC3-202ENST00000339420 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
ZDHHC3-202ENST00000339420 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
ZDHHC3-202ENST00000339420 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
ZDHHC3-202ENST00000339420 KDM2AQ9Y2K7 1162 aa13.69□□□□□ -0.22
ZDHHC3-202ENST00000339420 MYOM3Q5VTT5 1437 aa13.69□□□□□ -0.22
ZDHHC3-202ENST00000339420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.22
ZDHHC3-202ENST00000339420 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
ZDHHC3-202ENST00000339420 WASHC2CQ9Y4E1 1318 aa13.65□□□□□ -0.22
ZDHHC3-202ENST00000339420 CRBNQ96SW2 442 aa13.65□□□□□ -0.22
ZDHHC3-202ENST00000339420 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
ZDHHC3-202ENST00000339420 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
ZDHHC3-202ENST00000339420 RGS3P49796 1198 aa13.64□□□□□ -0.23
ZDHHC3-202ENST00000339420 UBE2Q2Q8WVN8 375 aa13.64□□□□□ -0.23
ZDHHC3-202ENST00000339420 USP47Q96K76 1375 aa13.64□□□□□ -0.23
ZDHHC3-202ENST00000339420 KDM6BO15054 1643 aa13.64□□□□□ -0.23
ZDHHC3-202ENST00000339420 LRRIQ1Q96JM4 1722 aa13.63□□□□□ -0.23
ZDHHC3-202ENST00000339420 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
ZDHHC3-202ENST00000339420 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
ZDHHC3-202ENST00000339420 ZNF644Q9H582 1327 aaPredicted RBP13.63□□□□□ -0.23
ZDHHC3-202ENST00000339420 C20orf194Q5TEA3 1177 aa13.62□□□□□ -0.23
ZDHHC3-202ENST00000339420 DDRGK1Q96HY6 314 aa13.62□□□□□ -0.23
ZDHHC3-202ENST00000339420 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
ZDHHC3-202ENST00000339420 ADAMTS12P58397 1594 aa13.6□□□□□ -0.23
ZDHHC3-202ENST00000339420 ZNF777Q9ULD5 760 aaPredicted RBP13.6□□□□□ -0.23
ZDHHC3-202ENST00000339420 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
ZDHHC3-202ENST00000339420 ST20-MTHFSA0A0A6YYL1 179 aa13.58□□□□□ -0.23
ZDHHC3-202ENST00000339420 MS4A1P11836 297 aa13.58□□□□□ -0.24
ZDHHC3-202ENST00000339420 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
ZDHHC3-202ENST00000339420 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.24
ZDHHC3-202ENST00000339420 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
ZDHHC3-202ENST00000339420 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
ZDHHC3-202ENST00000339420 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
ZDHHC3-202ENST00000339420 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
ZDHHC3-202ENST00000339420 WDR62O43379 1518 aa13.55□□□□□ -0.24
ZDHHC3-202ENST00000339420 PKD2Q13563 968 aa13.54□□□□□ -0.24
ZDHHC3-202ENST00000339420 SLKQ9H2G2 1235 aaPredicted RBP13.54□□□□□ -0.24
ZDHHC3-202ENST00000339420 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
ZDHHC3-202ENST00000339420 RPRD2Q5VT52 1461 aaKnown RBP13.53□□□□□ -0.24
ZDHHC3-202ENST00000339420 EHBP1L1Q8N3D4 1523 aa13.53□□□□□ -0.24
ZDHHC3-202ENST00000339420 SUPT6HQ7KZ85 1726 aaKnown RBP13.53□□□□□ -0.24
ZDHHC3-202ENST00000339420 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.25
ZDHHC3-202ENST00000339420 POGKQ9P215 609 aa13.52□□□□□ -0.25
ZDHHC3-202ENST00000339420 IQGAP2Q13576 1575 aa13.51□□□□□ -0.25
ZDHHC3-202ENST00000339420 HECW1Q76N89 1606 aa13.51□□□□□ -0.25
ZDHHC3-202ENST00000339420 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
ZDHHC3-202ENST00000339420 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
ZDHHC3-202ENST00000339420 MAGI3Q5TCQ9 1506 aa13.49□□□□□ -0.25
ZDHHC3-202ENST00000339420 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
ZDHHC3-202ENST00000339420 RGL3Q3MIN7 710 aa13.48□□□□□ -0.25
ZDHHC3-202ENST00000339420 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
ZDHHC3-202ENST00000339420 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
ZDHHC3-202ENST00000339420 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
ZDHHC3-202ENST00000339420 UGGT2Q9NYU1 1516 aa13.47□□□□□ -0.25
ZDHHC3-202ENST00000339420 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
ZDHHC3-202ENST00000339420 RALBP1Q15311 655 aa13.47□□□□□ -0.25
ZDHHC3-202ENST00000339420 GZF1Q9H116 711 aaPredicted RBP13.47□□□□□ -0.25
ZDHHC3-202ENST00000339420 BCORL1Q5H9F3 1711 aa13.46□□□□□ -0.25
ZDHHC3-202ENST00000339420 BRD4O60885 1362 aaPredicted RBP13.46□□□□□ -0.25
ZDHHC3-202ENST00000339420 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.26
ZDHHC3-202ENST00000339420 C8orf34Q49A92 452 aa13.46□□□□□ -0.26
ZDHHC3-202ENST00000339420 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.26
ZDHHC3-202ENST00000339420 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.26
ZDHHC3-202ENST00000339420 NAP1L5Q96NT1 182 aaPredicted RBP13.45□□□□□ -0.26
ZDHHC3-202ENST00000339420 MIA2Q96PC5 1412 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms