RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
MUC1-202ENST00000338684 ZFYVE16Q7Z3T8 1539 aa24.2■■□□□ 1.47
MUC1-202ENST00000338684 TROQ12816 1431 aaPredicted RBP24.19■■□□□ 1.46
MUC1-202ENST00000338684 POGZQ7Z3K3 1410 aa24.19■■□□□ 1.46
MUC1-202ENST00000338684 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
MUC1-202ENST00000338684 MYO5CQ9NQX4 1742 aa24.16■■□□□ 1.46
MUC1-202ENST00000338684 RIMS1Q86UR5 1692 aaKnown RBP24.16■■□□□ 1.46
MUC1-202ENST00000338684 MLECQ14165 292 aa24.15■■□□□ 1.46
MUC1-202ENST00000338684 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
MUC1-202ENST00000338684 AFAP1Q8N556 730 aa24.13■■□□□ 1.45
MUC1-202ENST00000338684 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
MUC1-202ENST00000338684 CLIP1P30622 1438 aa24.1■■□□□ 1.45
MUC1-202ENST00000338684 LMTK3Q96Q04 1460 aa24.1■■□□□ 1.45
MUC1-202ENST00000338684 ARHGAP5Q13017 1502 aa24.1■■□□□ 1.45
MUC1-202ENST00000338684 PCF11O94913 1555 aaKnown RBP24.09■■□□□ 1.45
MUC1-202ENST00000338684 ATP10AO60312 1499 aa24.09■■□□□ 1.45
MUC1-202ENST00000338684 CDC42BPBQ9Y5S2 1711 aa24.07■■□□□ 1.44
MUC1-202ENST00000338684 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
MUC1-202ENST00000338684 HSPA2P54652 639 aa24.04■■□□□ 1.44
MUC1-202ENST00000338684 ZNF518AQ6AHZ1 1483 aa24.04■■□□□ 1.44
MUC1-202ENST00000338684 CCDC18Q5T9S5 1454 aa24.02■■□□□ 1.44
MUC1-202ENST00000338684 ARHGEF12Q9NZN5 1544 aa24.02■■□□□ 1.44
MUC1-202ENST00000338684 KDM5CP41229 1560 aa24.02■■□□□ 1.44
MUC1-202ENST00000338684 FER1L4A9Z1Z3 1794 aa24■■□□□ 1.43
MUC1-202ENST00000338684 TRAPPC8Q9Y2L5 1435 aa24■■□□□ 1.43
MUC1-202ENST00000338684 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
MUC1-202ENST00000338684 CEBPAP49715 358 aaPredicted RBP23.98■■□□□ 1.43
MUC1-202ENST00000338684 PREX2Q70Z35 1606 aa23.98■■□□□ 1.43
MUC1-202ENST00000338684 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
MUC1-202ENST00000338684 FYCO1Q9BQS8 1478 aa23.97■■□□□ 1.43
MUC1-202ENST00000338684 DIP2CQ9Y2E4 1556 aa23.95■■□□□ 1.42
MUC1-202ENST00000338684 MLH3Q9UHC1 1453 aa23.94■■□□□ 1.42
MUC1-202ENST00000338684 ABCC1P33527 1531 aa23.94■■□□□ 1.42
MUC1-202ENST00000338684 CDC42BPAQ5VT25 1732 aa23.93■■□□□ 1.42
MUC1-202ENST00000338684 ABCA6Q8N139 1617 aa23.92■■□□□ 1.42
MUC1-202ENST00000338684 FBXO41Q8TF61 875 aa23.91■■□□□ 1.42
MUC1-202ENST00000338684 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
MUC1-202ENST00000338684 ITSN2Q9NZM3 1697 aa23.9■■□□□ 1.42
MUC1-202ENST00000338684 GPATCH8Q9UKJ3 1502 aaKnown RBP23.89■■□□□ 1.41
MUC1-202ENST00000338684 REREQ9P2R6 1566 aa23.87■■□□□ 1.41
MUC1-202ENST00000338684 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
MUC1-202ENST00000338684 HNRNPMP52272 730 aaKnown RBP eCLIP23.86■■□□□ 1.41
MUC1-202ENST00000338684 SAMD9LQ8IVG5 1584 aa23.85■■□□□ 1.41
MUC1-202ENST00000338684 AGLP35573 1532 aa23.83■■□□□ 1.41
MUC1-202ENST00000338684 CEP162Q5TB80 1403 aa23.83■■□□□ 1.4
MUC1-202ENST00000338684 SYCP2Q9BX26 1530 aa23.8■■□□□ 1.4
MUC1-202ENST00000338684 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
MUC1-202ENST00000338684 PREX1Q8TCU6 1659 aa23.79■■□□□ 1.4
MUC1-202ENST00000338684 SPAG9O60271 1321 aaKnown RBP23.78■■□□□ 1.4
MUC1-202ENST00000338684 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
MUC1-202ENST00000338684 SETD1BQ9UPS6 1966 aaKnown RBP23.77■■□□□ 1.4
MUC1-202ENST00000338684 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
MUC1-202ENST00000338684 C3P01024 1663 aa23.76■■□□□ 1.39
MUC1-202ENST00000338684 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
MUC1-202ENST00000338684 KIAA1107Q9UPP5 1409 aa23.75■■□□□ 1.39
MUC1-202ENST00000338684 ESF1Q9H501 851 aaKnown RBP23.73■■□□□ 1.39
MUC1-202ENST00000338684 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
MUC1-202ENST00000338684 STRCQ7RTU9 1775 aa23.72■■□□□ 1.39
MUC1-202ENST00000338684 CERKQ8TCT0 537 aa23.71■■□□□ 1.39
MUC1-202ENST00000338684 PLEKHH2Q8IVE3 1493 aa23.69■■□□□ 1.38
MUC1-202ENST00000338684 ATP7AQ04656 1500 aa23.69■■□□□ 1.38
MUC1-202ENST00000338684 TIAM1Q13009 1591 aa23.68■■□□□ 1.38
MUC1-202ENST00000338684 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
MUC1-202ENST00000338684 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
MUC1-202ENST00000338684 INO80Q9ULG1 1556 aaPredicted RBP23.66■■□□□ 1.38
MUC1-202ENST00000338684 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
MUC1-202ENST00000338684 MBD5Q9P267 1494 aa23.65■■□□□ 1.38
MUC1-202ENST00000338684 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
MUC1-202ENST00000338684 A2MP01023 1474 aa23.64■■□□□ 1.38
MUC1-202ENST00000338684 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
MUC1-202ENST00000338684 PLXNC1O60486 1568 aa23.62■■□□□ 1.37
MUC1-202ENST00000338684 GGT6Q6P531 493 aa23.61■■□□□ 1.37
MUC1-202ENST00000338684 MROH2AA6NES4 1674 aa23.57■■□□□ 1.36
MUC1-202ENST00000338684 CLTCQ00610 1675 aaKnown RBP23.57■■□□□ 1.36
MUC1-202ENST00000338684 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
MUC1-202ENST00000338684 NPATQ14207 1427 aa23.56■■□□□ 1.36
MUC1-202ENST00000338684 PTPRTO14522 1441 aa23.55■■□□□ 1.36
MUC1-202ENST00000338684 RTEL1-TNFRSF6BF6WH68 1400 aa23.54■■□□□ 1.36
MUC1-202ENST00000338684 NCOA1Q15788 1441 aa23.53■■□□□ 1.36
MUC1-202ENST00000338684 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
MUC1-202ENST00000338684 ADGBQ8N7X0 1667 aa23.53■■□□□ 1.36
MUC1-202ENST00000338684 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
MUC1-202ENST00000338684 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
MUC1-202ENST00000338684 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
MUC1-202ENST00000338684 CAMSAP2Q08AD1 1489 aa23.49■■□□□ 1.35
MUC1-202ENST00000338684 CAMSAP1Q5T5Y3 1602 aa23.49■■□□□ 1.35
MUC1-202ENST00000338684 NCKAP5LQ9HCH0 1330 aa23.49■■□□□ 1.35
MUC1-202ENST00000338684 CCDC141Q6ZP82 1450 aa23.47■■□□□ 1.35
MUC1-202ENST00000338684 KIF3BO15066 747 aa23.46■■□□□ 1.35
MUC1-202ENST00000338684 KANK4Q5T7N3 995 aaPredicted RBP23.46■■□□□ 1.35
MUC1-202ENST00000338684 RSPH4AQ5TD94 716 aa23.46■■□□□ 1.35
MUC1-202ENST00000338684 LTBP4Q8N2S1 1624 aa23.44■■□□□ 1.34
MUC1-202ENST00000338684 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
MUC1-202ENST00000338684 MYO3AQ8NEV4 1616 aa23.42■■□□□ 1.34
MUC1-202ENST00000338684 FBXO31Q5XUX0 539 aaPredicted RBP23.42■■□□□ 1.34
MUC1-202ENST00000338684 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
MUC1-202ENST00000338684 ZNF142P52746 1687 aaPredicted RBP23.39■■□□□ 1.34
MUC1-202ENST00000338684 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
MUC1-202ENST00000338684 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
MUC1-202ENST00000338684 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms