RNA–Protein interactions for RNA: ENST00000336053.10

HNRNPC-201, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 3,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-201ENST00000336053 SLKQ9H2G2 1235 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-201ENST00000336053 LRRC9Q6ZRR7 1453 aa11.65□□□□□ -0.54
HNRNPC-201ENST00000336053 POGKQ9P215 609 aa11.65□□□□□ -0.55
HNRNPC-201ENST00000336053 ARID3AQ99856 593 aa11.64□□□□□ -0.55
HNRNPC-201ENST00000336053 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
HNRNPC-201ENST00000336053 IGF1RP08069 1367 aa11.62□□□□□ -0.55
HNRNPC-201ENST00000336053 RRP1P56182 461 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-201ENST00000336053 RCAN3Q9UKA8 241 aa11.62□□□□□ -0.55
HNRNPC-201ENST00000336053 PCF11O94913 1555 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-201ENST00000336053 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
HNRNPC-201ENST00000336053 FOXD1Q16676 465 aa11.6□□□□□ -0.55
HNRNPC-201ENST00000336053 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
HNRNPC-201ENST00000336053 RRP7BPQ9NSQ0 103 aa11.59□□□□□ -0.55
HNRNPC-201ENST00000336053 MS4A1P11836 297 aa11.59□□□□□ -0.55
HNRNPC-201ENST00000336053 RRP9O43818 475 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-201ENST00000336053 SMG6Q86US8 1419 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-201ENST00000336053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.57□□□□□ -0.562e-10■□□□□ 8.9
HNRNPC-201ENST00000336053 L1TD1Q5T7N2 865 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-201ENST00000336053 CRBNQ96SW2 442 aa11.55□□□□□ -0.56
HNRNPC-201ENST00000336053 CNTLNQ9NXG0 1405 aa11.55□□□□□ -0.56
HNRNPC-201ENST00000336053 L3MBTL2Q969R5 705 aa11.55□□□□□ -0.56
HNRNPC-201ENST00000336053 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.562e-7■■■■□ 24.5
HNRNPC-201ENST00000336053 CTTNBP2Q8WZ74 1663 aa11.54□□□□□ -0.56
HNRNPC-201ENST00000336053 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
HNRNPC-201ENST00000336053 LRRIQ1Q96JM4 1722 aa11.53□□□□□ -0.56
HNRNPC-201ENST00000336053 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
HNRNPC-201ENST00000336053 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
HNRNPC-201ENST00000336053 GOLGA6L3A6NEY3 463 aa11.53□□□□□ -0.56
HNRNPC-201ENST00000336053 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-201ENST00000336053 PANK2Q9BZ23 570 aa11.53□□□□□ -0.56
HNRNPC-201ENST00000336053 EFCAB5A4FU69 1503 aa11.53□□□□□ -0.56
HNRNPC-201ENST00000336053 CCDC7Q96M83 1385 aa11.52□□□□□ -0.56
HNRNPC-201ENST00000336053 TRIM44Q96DX7 344 aaPredicted RBP11.52□□□□□ -0.56
HNRNPC-201ENST00000336053 CDCA7LQ96GN5 454 aa11.52□□□□□ -0.56
HNRNPC-201ENST00000336053 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
HNRNPC-201ENST00000336053 KDM5BQ9UGL1 1544 aa11.52□□□□□ -0.57
HNRNPC-201ENST00000336053 KIF7Q2M1P5 1343 aa11.51□□□□□ -0.57
HNRNPC-201ENST00000336053 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
HNRNPC-201ENST00000336053 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
HNRNPC-201ENST00000336053 CUL7Q14999 1698 aa11.49□□□□□ -0.57
HNRNPC-201ENST00000336053 CASKIN1Q8WXD9 1431 aa11.49□□□□□ -0.57
HNRNPC-201ENST00000336053 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
HNRNPC-201ENST00000336053 XRCC6P12956 609 aaKnown RBP eCLIP11.47□□□□□ -0.573e-6■□□□□ 10.7
HNRNPC-201ENST00000336053 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
HNRNPC-201ENST00000336053 BECN1Q14457 450 aa11.47□□□□□ -0.57
HNRNPC-201ENST00000336053 MYH16Q9H6N6 1097 aa11.47□□□□□ -0.57
HNRNPC-201ENST00000336053 PTPN23Q9H3S7 1636 aa11.47□□□□□ -0.57
HNRNPC-201ENST00000336053 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
HNRNPC-201ENST00000336053 PNISRQ8TF01 805 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-201ENST00000336053 ABCA10Q8WWZ4 1543 aa11.46□□□□□ -0.58
HNRNPC-201ENST00000336053 SAMD9Q5K651 1589 aa11.46□□□□□ -0.58
HNRNPC-201ENST00000336053 C20orf194Q5TEA3 1177 aa11.45□□□□□ -0.58
HNRNPC-201ENST00000336053 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
HNRNPC-201ENST00000336053 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
HNRNPC-201ENST00000336053 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
HNRNPC-201ENST00000336053 CLCN1P35523 988 aa11.44□□□□□ -0.58
HNRNPC-201ENST00000336053 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
HNRNPC-201ENST00000336053 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-201ENST00000336053 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
HNRNPC-201ENST00000336053 ZBTB7CA1YPR0 619 aa11.43□□□□□ -0.58
HNRNPC-201ENST00000336053 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
HNRNPC-201ENST00000336053 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
HNRNPC-201ENST00000336053 PTPRKQ15262 1439 aa11.42□□□□□ -0.58
HNRNPC-201ENST00000336053 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
HNRNPC-201ENST00000336053 THOC2Q8NI27 1593 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-201ENST00000336053 ESPNB1AK53 854 aa11.42□□□□□ -0.58
HNRNPC-201ENST00000336053 ARHGEF11O15085 1522 aa11.41□□□□□ -0.58
HNRNPC-201ENST00000336053 CCDC18Q5T9S5 1454 aa11.41□□□□□ -0.58
HNRNPC-201ENST00000336053 GCC2Q8IWJ2 1684 aa11.41□□□□□ -0.58
HNRNPC-201ENST00000336053 UACAQ9BZF9 1416 aa11.41□□□□□ -0.58
HNRNPC-201ENST00000336053 KIF21AQ7Z4S6 1674 aa11.41□□□□□ -0.58
HNRNPC-201ENST00000336053 C8orf34Q49A92 452 aa11.4□□□□□ -0.59
HNRNPC-201ENST00000336053 UPF2Q9HAU5 1272 aaKnown RBP11.4□□□□□ -0.59
HNRNPC-201ENST00000336053 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.59
HNRNPC-201ENST00000336053 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.59
HNRNPC-201ENST00000336053 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
HNRNPC-201ENST00000336053 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
HNRNPC-201ENST00000336053 MPHOSPH9Q99550 1183 aa11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 CENPQQ7L2Z9 268 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 PDCL3Q9H2J4 239 aa11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
HNRNPC-201ENST00000336053 PDE4CQ08493 712 aa11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 NAIPQ13075 1403 aa11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 AAMPQ13685 434 aa11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 SUPT6HQ7KZ85 1726 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 MTUS2Q5JR59 1369 aa11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 KTN1Q86UP2 1357 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-201ENST00000336053 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-201ENST00000336053 SLC4A1APQ9BWU0 796 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-201ENST00000336053 FMN1Q68DA7 1419 aa11.36□□□□□ -0.59
HNRNPC-201ENST00000336053 NCOA2Q15596 1464 aa11.36□□□□□ -0.59
HNRNPC-201ENST00000336053 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
HNRNPC-201ENST00000336053 TRAK2O60296 914 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms