RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 FOXD1Q16676 465 aa32.83■■■□□ 2.85
NDEL1-201ENST00000334527 HSPA5P11021 654 aaKnown RBP32.82■■■□□ 2.84
NDEL1-201ENST00000334527 CEP170Q5SW79 1584 aa32.82■■■□□ 2.84
NDEL1-201ENST00000334527 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
NDEL1-201ENST00000334527 SYNJ2O15056 1496 aa32.79■■■□□ 2.84
NDEL1-201ENST00000334527 TROQ12816 1431 aaPredicted RBP32.78■■■□□ 2.84
NDEL1-201ENST00000334527 PRG4Q92954 1404 aaPredicted RBP32.78■■■□□ 2.84
NDEL1-201ENST00000334527 L3MBTL2Q969R5 705 aa32.77■■■□□ 2.84
NDEL1-201ENST00000334527 PLB1Q6P1J6 1458 aa32.75■■■□□ 2.83
NDEL1-201ENST00000334527 WASHC2AQ641Q2 1341 aa32.75■■■□□ 2.83
NDEL1-201ENST00000334527 ANKRD30BQ9BXX2 1392 aa32.75■■■□□ 2.83
NDEL1-201ENST00000334527 EIF4G2P78344 907 aaKnown RBP eCLIP32.74■■■□□ 2.83
NDEL1-201ENST00000334527 ITSN2Q9NZM3 1697 aa32.72■■■□□ 2.83
NDEL1-201ENST00000334527 CAMSAP2Q08AD1 1489 aa32.72■■■□□ 2.83
NDEL1-201ENST00000334527 RPRD2Q5VT52 1461 aaKnown RBP32.72■■■□□ 2.83
NDEL1-201ENST00000334527 FBLN2P98095 1184 aa32.7■■■□□ 2.83
NDEL1-201ENST00000334527 CFDP1Q9UEE9 299 aaPredicted RBP32.69■■■□□ 2.82
NDEL1-201ENST00000334527 SLC4A1APQ9BWU0 796 aaKnown RBP32.68■■■□□ 2.82
NDEL1-201ENST00000334527 FKBP8Q14318 412 aa32.67■■■□□ 2.82
NDEL1-201ENST00000334527 CARMIL2Q6F5E8 1435 aa32.67■■■□□ 2.82
NDEL1-201ENST00000334527 KIF14Q15058 1648 aa32.67■■■□□ 2.82
NDEL1-201ENST00000334527 ADCY10Q96PN6 1610 aa32.67■■■□□ 2.82
NDEL1-201ENST00000334527 GPATCH8Q9UKJ3 1502 aaKnown RBP32.66■■■□□ 2.82
NDEL1-201ENST00000334527 TEX14Q8IWB6 1497 aa32.64■■■□□ 2.82
NDEL1-201ENST00000334527 ADGBQ8N7X0 1667 aa32.63■■■□□ 2.81
NDEL1-201ENST00000334527 NUP160Q12769 1436 aa32.63■■■□□ 2.81
NDEL1-201ENST00000334527 JPH4Q96JJ6 628 aa32.62■■■□□ 2.81
NDEL1-201ENST00000334527 BCANQ96GW7 911 aa32.61■■■□□ 2.81
NDEL1-201ENST00000334527 NCOA1Q15788 1441 aa32.6■■■□□ 2.81
NDEL1-201ENST00000334527 ZNF777Q9ULD5 760 aaPredicted RBP32.59■■■□□ 2.81
NDEL1-201ENST00000334527 PZPP20742 1482 aa32.58■■■□□ 2.81
NDEL1-201ENST00000334527 NBPF8Q3BBV2 869 aa32.58■■■□□ 2.81
NDEL1-201ENST00000334527 CROCC2H7BZ55 1655 aa32.58■■■□□ 2.81
NDEL1-201ENST00000334527 CNTLNQ9NXG0 1405 aa32.57■■■□□ 2.8
NDEL1-201ENST00000334527 NEFLP07196 543 aa32.56■■■□□ 2.8
NDEL1-201ENST00000334527 ADGRL2O95490 1459 aa32.54■■■□□ 2.8
NDEL1-201ENST00000334527 TSHZ2Q9NRE2 1034 aa32.53■■■□□ 2.8
NDEL1-201ENST00000334527 C11orf95C9JLR9 678 aaPredicted RBP32.52■■■□□ 2.8
NDEL1-201ENST00000334527 CCDC7Q96M83 1385 aa32.52■■■□□ 2.8
NDEL1-201ENST00000334527 ABCA8O94911 1581 aa32.49■■■□□ 2.79
NDEL1-201ENST00000334527 ANKRD30AQ9BXX3 1397 aa32.48■■■□□ 2.79
NDEL1-201ENST00000334527 HNRNPUQ00839 825 aaKnown RBP eCLIP32.47■■■□□ 2.79
NDEL1-201ENST00000334527 PLEKHD1A6NEE1 506 aa32.45■■■□□ 2.79
NDEL1-201ENST00000334527 CDC42BPAQ5VT25 1732 aa32.45■■■□□ 2.79
NDEL1-201ENST00000334527 KIAA1107Q9UPP5 1409 aa32.44■■■□□ 2.78
NDEL1-201ENST00000334527 SPATA31E1Q6ZUB1 1445 aa32.44■■■□□ 2.78
NDEL1-201ENST00000334527 ATP10BO94823 1461 aa32.41■■■□□ 2.78
NDEL1-201ENST00000334527 ABCC10Q5T3U5 1492 aa32.4■■■□□ 2.78
NDEL1-201ENST00000334527 POLR1AO95602 1720 aaPredicted RBP32.4■■■□□ 2.78
NDEL1-201ENST00000334527 ANKRD50Q9ULJ7 1429 aa32.39■■■□□ 2.78
NDEL1-201ENST00000334527 PKD2Q13563 968 aa32.38■■■□□ 2.77
NDEL1-201ENST00000334527 MBD5Q9P267 1494 aa32.37■■■□□ 2.77
NDEL1-201ENST00000334527 KIF7Q2M1P5 1343 aa32.36■■■□□ 2.77
NDEL1-201ENST00000334527 PRKRIP1Q9H875 184 aaPredicted RBP32.36■■■□□ 2.77
NDEL1-201ENST00000334527 SHANK2Q9UPX8 1470 aa32.35■■■□□ 2.77
NDEL1-201ENST00000334527 CCDC184Q52MB2 194 aa32.33■■■□□ 2.77
NDEL1-201ENST00000334527 C9orf84Q5VXU9 1444 aa32.33■■■□□ 2.77
NDEL1-201ENST00000334527 MYT1Q01538 1121 aa32.32■■■□□ 2.76
NDEL1-201ENST00000334527 NUP155O75694 1391 aa32.26■■■□□ 2.75
NDEL1-201ENST00000334527 ZNF326Q5BKZ1 582 aaKnown RBP32.25■■■□□ 2.75
NDEL1-201ENST00000334527 TSPY4P0CV99 314 aa32.24■■■□□ 2.75
NDEL1-201ENST00000334527 TSPY10P0CW01 314 aa32.24■■■□□ 2.75
NDEL1-201ENST00000334527 MRS2Q9HD23 443 aa32.23■■■□□ 2.75
NDEL1-201ENST00000334527 USP47Q96K76 1375 aa32.22■■■□□ 2.75
NDEL1-201ENST00000334527 PTPRGP23470 1445 aa32.22■■■□□ 2.75
NDEL1-201ENST00000334527 FAM9BQ8IZU0 186 aa32.2■■■□□ 2.75
NDEL1-201ENST00000334527 KDM5DQ9BY66 1539 aa32.2■■■□□ 2.74
NDEL1-201ENST00000334527 ARHGEF5Q12774 1597 aa32.19■■■□□ 2.74
NDEL1-201ENST00000334527 HNRNPMP52272 730 aaKnown RBP eCLIP32.19■■■□□ 2.746e-7■■■■□ 23.7
NDEL1-201ENST00000334527 KIF15Q9NS87 1388 aa32.18■■■□□ 2.74
NDEL1-201ENST00000334527 BCORL1Q5H9F3 1711 aa32.18■■■□□ 2.74
NDEL1-201ENST00000334527 KDM5CP41229 1560 aa32.16■■■□□ 2.74
NDEL1-201ENST00000334527 UHRF1BP1Q6BDS2 1440 aa32.14■■■□□ 2.74
NDEL1-201ENST00000334527 SAMD9LQ8IVG5 1584 aa32.12■■■□□ 2.73
NDEL1-201ENST00000334527 CDC42BPBQ9Y5S2 1711 aa32.11■■■□□ 2.73
NDEL1-201ENST00000334527 ARHGEF12Q9NZN5 1544 aa32.11■■■□□ 2.73
NDEL1-201ENST00000334527 PREX2Q70Z35 1606 aa32.11■■■□□ 2.73
NDEL1-201ENST00000334527 RALGAPBQ86X10 1494 aa32.11■■■□□ 2.73
NDEL1-201ENST00000334527 CCDC141Q6ZP82 1450 aa32.09■■■□□ 2.73
NDEL1-201ENST00000334527 DHX29Q7Z478 1369 aaKnown RBP32.09■■■□□ 2.73
NDEL1-201ENST00000334527 POLR3GLQ9BT43 218 aa32.09■■■□□ 2.73
NDEL1-201ENST00000334527 IRX6P78412 446 aaPredicted RBP32.08■■■□□ 2.73
NDEL1-201ENST00000334527 ZBED9Q6R2W3 1325 aa32.06■■■□□ 2.72
NDEL1-201ENST00000334527 CHD1O14646 1710 aa32.06■■■□□ 2.72
NDEL1-201ENST00000334527 ARID4BQ4LE39 1312 aaPredicted RBP32.05■■■□□ 2.72
NDEL1-201ENST00000334527 CARD11Q9BXL7 1154 aa32.02■■■□□ 2.72
NDEL1-201ENST00000334527 RSPH4AQ5TD94 716 aa32■■■□□ 2.71
NDEL1-201ENST00000334527 KDM2AQ9Y2K7 1162 aa32■■■□□ 2.71
NDEL1-201ENST00000334527 FAM135AQ9P2D6 1515 aa31.99■■■□□ 2.71
NDEL1-201ENST00000334527 CNGB1Q14028 1251 aaPredicted RBP31.97■■■□□ 2.71
NDEL1-201ENST00000334527 DCAF11Q8TEB1 546 aa31.96■■■□□ 2.71
NDEL1-201ENST00000334527 SYCP2Q9BX26 1530 aa31.96■■■□□ 2.71
NDEL1-201ENST00000334527 TTC37Q6PGP7 1564 aa31.96■■■□□ 2.71
NDEL1-201ENST00000334527 SHROOM2Q13796 1616 aa31.95■■■□□ 2.71
NDEL1-201ENST00000334527 ROCK2O75116 1388 aaKnown RBP31.95■■■□□ 2.71
NDEL1-201ENST00000334527 ARHGAP5Q13017 1502 aa31.94■■■□□ 2.7
NDEL1-201ENST00000334527 RBM19Q9Y4C8 960 aaKnown RBP31.94■■■□□ 2.7
NDEL1-201ENST00000334527 ERICH6BQ5W0A0 696 aa31.94■■■□□ 2.7
NDEL1-201ENST00000334527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.92■■■□□ 2.7
NDEL1-201ENST00000334527 MAST1Q9Y2H9 1570 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms