RNA–Protein interactions for RNA: ENST00000323630.9

MTMR3-201, Transcript of myotubularin related protein 3, humanhuman

TSL 5 BASIC

Gene MTMR3, Length 5,866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-201ENST00000323630 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.13
MTMR3-201ENST00000323630 POGKQ9P215 609 aa15.83■□□□□ 0.12
MTMR3-201ENST00000323630 RWDD1Q9H446 243 aaPredicted RBP15.83■□□□□ 0.12
MTMR3-201ENST00000323630 TMF1P82094 1093 aa15.82■□□□□ 0.12
MTMR3-201ENST00000323630 SETQ01105 290 aaPredicted RBP15.82■□□□□ 0.12
MTMR3-201ENST00000323630 PLEKHD1A6NEE1 506 aa15.82■□□□□ 0.12
MTMR3-201ENST00000323630 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
MTMR3-201ENST00000323630 TSHZ2Q9NRE2 1034 aa15.81■□□□□ 0.12
MTMR3-201ENST00000323630 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
MTMR3-201ENST00000323630 CSPP1Q1MSJ5 1256 aa15.8■□□□□ 0.12
MTMR3-201ENST00000323630 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
MTMR3-201ENST00000323630 EEA1Q15075 1411 aa15.78■□□□□ 0.12
MTMR3-201ENST00000323630 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
MTMR3-201ENST00000323630 RCAN3Q9UKA8 241 aa15.78■□□□□ 0.12
MTMR3-201ENST00000323630 CCDC34Q96HJ3 373 aa15.78■□□□□ 0.12
MTMR3-201ENST00000323630 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
MTMR3-201ENST00000323630 APBB1O00213 710 aa15.77■□□□□ 0.11
MTMR3-201ENST00000323630 PHF14O94880 888 aa15.77■□□□□ 0.11
MTMR3-201ENST00000323630 KCNH8Q96L42 1107 aa15.77■□□□□ 0.11
MTMR3-201ENST00000323630 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
MTMR3-201ENST00000323630 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
MTMR3-201ENST00000323630 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
MTMR3-201ENST00000323630 ISY1Q9ULR0 285 aaKnown RBP15.75■□□□□ 0.11
MTMR3-201ENST00000323630 MORC1Q86VD1 984 aa15.74■□□□□ 0.11
MTMR3-201ENST00000323630 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
MTMR3-201ENST00000323630 LMOD2Q6P5Q4 547 aa15.74■□□□□ 0.11
MTMR3-201ENST00000323630 ITPRIPQ8IWB1 547 aa15.74■□□□□ 0.11
MTMR3-201ENST00000323630 TPM3P06753 285 aa15.73■□□□□ 0.11
MTMR3-201ENST00000323630 HSP90B1P14625 803 aaKnown RBP15.73■□□□□ 0.11
MTMR3-201ENST00000323630 KTN1Q86UP2 1357 aaKnown RBP15.73■□□□□ 0.11
MTMR3-201ENST00000323630 DDX11L8A8MPP1 907 aa15.73■□□□□ 0.11
MTMR3-201ENST00000323630 RTF1Q92541 710 aaKnown RBP15.71■□□□□ 0.1
MTMR3-201ENST00000323630 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
MTMR3-201ENST00000323630 CALRP27797 417 aaKnown RBP15.68■□□□□ 0.1
MTMR3-201ENST00000323630 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
MTMR3-201ENST00000323630 DCAF11Q8TEB1 546 aa15.68■□□□□ 0.1
MTMR3-201ENST00000323630 GPS2Q13227 327 aa15.67■□□□□ 0.1
MTMR3-201ENST00000323630 HSPA5P11021 654 aaKnown RBP15.67■□□□□ 0.1
MTMR3-201ENST00000323630 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
MTMR3-201ENST00000323630 GSE1Q14687 1217 aa15.66■□□□□ 0.1
MTMR3-201ENST00000323630 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
MTMR3-201ENST00000323630 GPATCH3Q96I76 525 aa15.65■□□□□ 0.1
MTMR3-201ENST00000323630 ST18O60284 1047 aa15.65■□□□□ 0.1
MTMR3-201ENST00000323630 PDE4CQ08493 712 aa15.65■□□□□ 0.1
MTMR3-201ENST00000323630 RALBP1Q15311 655 aa15.64■□□□□ 0.09
MTMR3-201ENST00000323630 SKOR2Q2VWA4 1001 aaPredicted RBP15.64■□□□□ 0.09
MTMR3-201ENST00000323630 CEP89Q96ST8 783 aa15.64■□□□□ 0.09
MTMR3-201ENST00000323630 PRM3Q9NNZ6 103 aa15.63■□□□□ 0.09
MTMR3-201ENST00000323630 SRPK2P78362 688 aaKnown RBP15.63■□□□□ 0.09
MTMR3-201ENST00000323630 RASSF8Q8NHQ8 419 aa15.63■□□□□ 0.09
MTMR3-201ENST00000323630 TRIM6-TRIM34B2RNG4 842 aa15.63■□□□□ 0.09
MTMR3-201ENST00000323630 CREBRFQ8IUR6 639 aa15.63■□□□□ 0.09
MTMR3-201ENST00000323630 HMMRO75330 724 aa15.62■□□□□ 0.09
MTMR3-201ENST00000323630 NOL8Q76FK4 1167 aaKnown RBP15.61■□□□□ 0.09
MTMR3-201ENST00000323630 KIF16BQ96L93 1317 aa15.61■□□□□ 0.09
MTMR3-201ENST00000323630 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
MTMR3-201ENST00000323630 KIF3AQ9Y496 699 aa15.6■□□□□ 0.09
MTMR3-201ENST00000323630 CCAR2Q8N163 923 aaKnown RBP15.6■□□□□ 0.09
MTMR3-201ENST00000323630 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
MTMR3-201ENST00000323630 CCDC70Q6NSX1 233 aa15.6■□□□□ 0.09
MTMR3-201ENST00000323630 DDX49Q9Y6V7 483 aaKnown RBP15.6■□□□□ 0.09
MTMR3-201ENST00000323630 SOX12O15370 315 aa15.59■□□□□ 0.09
MTMR3-201ENST00000323630 U2AF1L5P0DN76 240 aaPredicted RBP15.59■□□□□ 0.09
MTMR3-201ENST00000323630 U2AF1Q01081 240 aaKnown RBP eCLIP15.59■□□□□ 0.091e-8■■■□□ 16.3
MTMR3-201ENST00000323630 TEX35Q5T0J7 233 aa15.58■□□□□ 0.09
MTMR3-201ENST00000323630 SF3A1Q15459 793 aaKnown RBP15.58■□□□□ 0.08
MTMR3-201ENST00000323630 SMC4Q9NTJ3 1288 aa15.58■□□□□ 0.08
MTMR3-201ENST00000323630 GOLGA6L19H0YKK7 550 aa15.58■□□□□ 0.08
MTMR3-201ENST00000323630 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
MTMR3-201ENST00000323630 TSR1Q2NL82 804 aaKnown RBP15.57■□□□□ 0.08
MTMR3-201ENST00000323630 HDAC5Q9UQL6 1122 aa15.57■□□□□ 0.08
MTMR3-201ENST00000323630 GORABQ5T7V8 394 aa15.57■□□□□ 0.08
MTMR3-201ENST00000323630 HDGFL2Q7Z4V5 671 aaPredicted RBP15.56■□□□□ 0.08
MTMR3-201ENST00000323630 FOXD4L5Q5VV16 416 aaPredicted RBP15.56■□□□□ 0.08
MTMR3-201ENST00000323630 FOXD4L4Q8WXT5 416 aaPredicted RBP15.56■□□□□ 0.08
MTMR3-201ENST00000323630 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
MTMR3-201ENST00000323630 KANK1Q14678 1352 aa15.56■□□□□ 0.08
MTMR3-201ENST00000323630 PATL2C9JE40 543 aaKnown RBP15.56■□□□□ 0.08
MTMR3-201ENST00000323630 ATP6V1DQ9Y5K8 247 aa15.56■□□□□ 0.08
MTMR3-201ENST00000323630 PDE3BQ13370 1112 aa15.55■□□□□ 0.08
MTMR3-201ENST00000323630 BECN2A8MW95 431 aa15.55■□□□□ 0.08
MTMR3-201ENST00000323630 TPD52L1Q16890 204 aaPredicted RBP15.55■□□□□ 0.08
MTMR3-201ENST00000323630 TPM1P09493 284 aa15.54■□□□□ 0.08
MTMR3-201ENST00000323630 FAM13BQ9NYF5 915 aa15.54■□□□□ 0.08
MTMR3-201ENST00000323630 CENPJQ9HC77 1338 aaPredicted RBP15.54■□□□□ 0.08
MTMR3-201ENST00000323630 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
MTMR3-201ENST00000323630 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
MTMR3-201ENST00000323630 PES1O00541 588 aaKnown RBP15.53■□□□□ 0.08
MTMR3-201ENST00000323630 ZNF592Q92610 1267 aa15.53■□□□□ 0.08
MTMR3-201ENST00000323630 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.53■□□□□ 0.08
MTMR3-201ENST00000323630 PDE4AP27815 886 aa15.52■□□□□ 0.07
MTMR3-201ENST00000323630 H3BQV1 296 aa15.52■□□□□ 0.07
MTMR3-201ENST00000323630 IFFO2Q5TF58 517 aa15.52■□□□□ 0.07
MTMR3-201ENST00000323630 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
MTMR3-201ENST00000323630 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
MTMR3-201ENST00000323630 CENPQQ7L2Z9 268 aaPredicted RBP15.51■□□□□ 0.07
MTMR3-201ENST00000323630 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
MTMR3-201ENST00000323630 TPM2P07951 284 aa15.51■□□□□ 0.07
MTMR3-201ENST00000323630 CLUAP1Q96AJ1 413 aa15.5■□□□□ 0.07
MTMR3-201ENST00000323630 NOM1Q5C9Z4 860 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms