RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
CD46-202ENST00000322918 ABCC5O15440 1437 aa13.17□□□□□ -0.3
CD46-202ENST00000322918 DAPK1P53355 1430 aa13.17□□□□□ -0.3
CD46-202ENST00000322918 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
CD46-202ENST00000322918 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
CD46-202ENST00000322918 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
CD46-202ENST00000322918 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
CD46-202ENST00000322918 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
CD46-202ENST00000322918 KDM6BO15054 1643 aa13.14□□□□□ -0.31
CD46-202ENST00000322918 MPHOSPH9Q99550 1183 aa13.14□□□□□ -0.31
CD46-202ENST00000322918 TCOF1Q13428 1488 aaKnown RBP13.13□□□□□ -0.31
CD46-202ENST00000322918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.314e-9■■□□□ 11.7
CD46-202ENST00000322918 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
CD46-202ENST00000322918 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
CD46-202ENST00000322918 SHROOM2Q13796 1616 aa13.11□□□□□ -0.31
CD46-202ENST00000322918 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
CD46-202ENST00000322918 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
CD46-202ENST00000322918 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
CD46-202ENST00000322918 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
CD46-202ENST00000322918 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
CD46-202ENST00000322918 ABCC10Q5T3U5 1492 aa13.08□□□□□ -0.32
CD46-202ENST00000322918 ZNF326Q5BKZ1 582 aaKnown RBP13.08□□□□□ -0.32
CD46-202ENST00000322918 ARHGAP5Q13017 1502 aa13.07□□□□□ -0.32
CD46-202ENST00000322918 MIER1Q8N108 512 aa13.06□□□□□ -0.32
CD46-202ENST00000322918 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
CD46-202ENST00000322918 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
CD46-202ENST00000322918 NCOA1Q15788 1441 aa13.05□□□□□ -0.32
CD46-202ENST00000322918 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
CD46-202ENST00000322918 PKD2Q13563 968 aa13.05□□□□□ -0.32
CD46-202ENST00000322918 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
CD46-202ENST00000322918 DNMT1P26358 1616 aaKnown RBP13.04□□□□□ -0.32
CD46-202ENST00000322918 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
CD46-202ENST00000322918 C9orf84Q5VXU9 1444 aa13.04□□□□□ -0.32
CD46-202ENST00000322918 TTC37Q6PGP7 1564 aa13.04□□□□□ -0.32
CD46-202ENST00000322918 EFCAB2Q5VUJ9 269 aa13.04□□□□□ -0.32
CD46-202ENST00000322918 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
CD46-202ENST00000322918 NUP155O75694 1391 aa13.03□□□□□ -0.32
CD46-202ENST00000322918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.02□□□□□ -0.321e-6■□□□□ 10.9
CD46-202ENST00000322918 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.32
CD46-202ENST00000322918 KIF15Q9NS87 1388 aa13.02□□□□□ -0.32
CD46-202ENST00000322918 ANKRD50Q9ULJ7 1429 aa13.02□□□□□ -0.33
CD46-202ENST00000322918 ZCCHC11Q5TAX3 1644 aaKnown RBP13.01□□□□□ -0.33
CD46-202ENST00000322918 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
CD46-202ENST00000322918 ROCK1Q13464 1354 aa13.01□□□□□ -0.33
CD46-202ENST00000322918 ADCY10Q96PN6 1610 aa13.01□□□□□ -0.33
CD46-202ENST00000322918 SYCP2Q9BX26 1530 aa13□□□□□ -0.33
CD46-202ENST00000322918 DDX10Q13206 875 aaKnown RBP13□□□□□ -0.33
CD46-202ENST00000322918 DENND4BO75064 1496 aaPredicted RBP12.99□□□□□ -0.33
CD46-202ENST00000322918 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
CD46-202ENST00000322918 KDM2AQ9Y2K7 1162 aa12.98□□□□□ -0.33
CD46-202ENST00000322918 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
CD46-202ENST00000322918 ASXL2Q76L83 1435 aa12.97□□□□□ -0.33
CD46-202ENST00000322918 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
CD46-202ENST00000322918 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
CD46-202ENST00000322918 MBD5Q9P267 1494 aa12.96□□□□□ -0.33
CD46-202ENST00000322918 RGL3Q3MIN7 710 aa12.95□□□□□ -0.34
CD46-202ENST00000322918 CCDC141Q6ZP82 1450 aa12.95□□□□□ -0.34
CD46-202ENST00000322918 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
CD46-202ENST00000322918 SPAG9O60271 1321 aaKnown RBP12.94□□□□□ -0.34
CD46-202ENST00000322918 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
CD46-202ENST00000322918 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
CD46-202ENST00000322918 WDR7Q9Y4E6 1490 aa12.94□□□□□ -0.34
CD46-202ENST00000322918 PLCH2O75038 1416 aa12.94□□□□□ -0.34
CD46-202ENST00000322918 UHRF1BP1LA0JNW5 1464 aa12.93□□□□□ -0.34
CD46-202ENST00000322918 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
CD46-202ENST00000322918 PREX2Q70Z35 1606 aa12.93□□□□□ -0.34
CD46-202ENST00000322918 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
CD46-202ENST00000322918 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
CD46-202ENST00000322918 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
CD46-202ENST00000322918 PZPP20742 1482 aa12.91□□□□□ -0.34
CD46-202ENST00000322918 NBPF8Q3BBV2 869 aa12.91□□□□□ -0.34
CD46-202ENST00000322918 PLEKHH2Q8IVE3 1493 aa12.9□□□□□ -0.34
CD46-202ENST00000322918 MYO5CQ9NQX4 1742 aa12.89□□□□□ -0.35
CD46-202ENST00000322918 FANCAO15360 1455 aa12.89□□□□□ -0.35
CD46-202ENST00000322918 SCAPERQ9BY12 1400 aa12.89□□□□□ -0.35
CD46-202ENST00000322918 ADGRL2O95490 1459 aa12.89□□□□□ -0.35
CD46-202ENST00000322918 RAPGEF3O95398 923 aa12.89□□□□□ -0.35
CD46-202ENST00000322918 KIF3BO15066 747 aa12.88□□□□□ -0.35
CD46-202ENST00000322918 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
CD46-202ENST00000322918 HSPA5P11021 654 aaKnown RBP12.88□□□□□ -0.35
CD46-202ENST00000322918 CROCC2H7BZ55 1655 aa12.87□□□□□ -0.35
CD46-202ENST00000322918 ADGBQ8N7X0 1667 aa12.87□□□□□ -0.35
CD46-202ENST00000322918 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
CD46-202ENST00000322918 KIAA1107Q9UPP5 1409 aa12.86□□□□□ -0.35
CD46-202ENST00000322918 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
CD46-202ENST00000322918 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
CD46-202ENST00000322918 SHANK2Q9UPX8 1470 aa12.85□□□□□ -0.35
CD46-202ENST00000322918 CD109Q6YHK3 1445 aa12.85□□□□□ -0.35
CD46-202ENST00000322918 FAM69CQ0P6D2 419 aa12.85□□□□□ -0.35
CD46-202ENST00000322918 GGT6Q6P531 493 aa12.84□□□□□ -0.35
CD46-202ENST00000322918 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.35
CD46-202ENST00000322918 EIF4G2P78344 907 aaKnown RBP eCLIP12.83□□□□□ -0.36
CD46-202ENST00000322918 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
CD46-202ENST00000322918 ABCC1P33527 1531 aa12.81□□□□□ -0.36
CD46-202ENST00000322918 FAM135AQ9P2D6 1515 aa12.79□□□□□ -0.36
CD46-202ENST00000322918 C11orf95C9JLR9 678 aaPredicted RBP12.78□□□□□ -0.36
CD46-202ENST00000322918 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
CD46-202ENST00000322918 CCDC144AA2RUR9 1427 aa12.77□□□□□ -0.37
CD46-202ENST00000322918 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
CD46-202ENST00000322918 TEX14Q8IWB6 1497 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms