RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 DAXXQ9UER7 740 aaPredicted RBP19.11■□□□□ 0.65
PABPC1-201ENST00000318607 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
PABPC1-201ENST00000318607 MPHOSPH9Q99550 1183 aa19.1■□□□□ 0.65
PABPC1-201ENST00000318607 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
PABPC1-201ENST00000318607 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
PABPC1-201ENST00000318607 NESP48681 1621 aa19.06■□□□□ 0.64
PABPC1-201ENST00000318607 CLASP1Q7Z460 1538 aa19.06■□□□□ 0.64
PABPC1-201ENST00000318607 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■■■■■ 29.3
PABPC1-201ENST00000318607 KIF7Q2M1P5 1343 aa19.03■□□□□ 0.64
PABPC1-201ENST00000318607 ZBED9Q6R2W3 1325 aa19.02■□□□□ 0.64
PABPC1-201ENST00000318607 PTPRKQ15262 1439 aa19.02■□□□□ 0.63
PABPC1-201ENST00000318607 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
PABPC1-201ENST00000318607 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
PABPC1-201ENST00000318607 NUDCQ9Y266 331 aa19■□□□□ 0.63
PABPC1-201ENST00000318607 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
PABPC1-201ENST00000318607 MAGI1Q96QZ7 1491 aaPredicted RBP18.99■□□□□ 0.63
PABPC1-201ENST00000318607 ZNF644Q9H582 1327 aaPredicted RBP18.98■□□□□ 0.63
PABPC1-201ENST00000318607 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
PABPC1-201ENST00000318607 RGL3Q3MIN7 710 aa18.98■□□□□ 0.63
PABPC1-201ENST00000318607 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
PABPC1-201ENST00000318607 RAD54L2Q9Y4B4 1467 aa18.96■□□□□ 0.63
PABPC1-201ENST00000318607 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
PABPC1-201ENST00000318607 CCDC7Q96M83 1385 aa18.96■□□□□ 0.63
PABPC1-201ENST00000318607 RGS3P49796 1198 aa18.96■□□□□ 0.63
PABPC1-201ENST00000318607 CDCA7LQ96GN5 454 aa18.96■□□□□ 0.63
PABPC1-201ENST00000318607 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
PABPC1-201ENST00000318607 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
PABPC1-201ENST00000318607 PDE4AP27815 886 aa18.94■□□□□ 0.62
PABPC1-201ENST00000318607 FGD6Q6ZV73 1430 aa18.94■□□□□ 0.62
PABPC1-201ENST00000318607 CARD11Q9BXL7 1154 aa18.91■□□□□ 0.62
PABPC1-201ENST00000318607 UGGT2Q9NYU1 1516 aa18.91■□□□□ 0.62
PABPC1-201ENST00000318607 EFCAB5A4FU69 1503 aa18.91■□□□□ 0.62
PABPC1-201ENST00000318607 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
PABPC1-201ENST00000318607 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.61
PABPC1-201ENST00000318607 UACAQ9BZF9 1416 aa18.89■□□□□ 0.61
PABPC1-201ENST00000318607 RCAN3Q9UKA8 241 aa18.88■□□□□ 0.61
PABPC1-201ENST00000318607 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
PABPC1-201ENST00000318607 CFAP43Q8NDM7 1665 aa18.88■□□□□ 0.61
PABPC1-201ENST00000318607 FMN1Q68DA7 1419 aa18.88■□□□□ 0.61
PABPC1-201ENST00000318607 CHD1O14646 1710 aa18.87■□□□□ 0.61
PABPC1-201ENST00000318607 FBLN2P98095 1184 aa18.87■□□□□ 0.61
PABPC1-201ENST00000318607 NAIPQ13075 1403 aa18.85■□□□□ 0.61
PABPC1-201ENST00000318607 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
PABPC1-201ENST00000318607 NUP160Q12769 1436 aa18.84■□□□□ 0.61
PABPC1-201ENST00000318607 LRRIQ1Q96JM4 1722 aa18.84■□□□□ 0.61
PABPC1-201ENST00000318607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
PABPC1-201ENST00000318607 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.61
PABPC1-201ENST00000318607 PKD2Q13563 968 aa18.83■□□□□ 0.6
PABPC1-201ENST00000318607 DCAF11Q8TEB1 546 aa18.83■□□□□ 0.6
PABPC1-201ENST00000318607 PCF11O94913 1555 aaKnown RBP18.82■□□□□ 0.6
PABPC1-201ENST00000318607 RRP1P56182 461 aaKnown RBP18.81■□□□□ 0.6
PABPC1-201ENST00000318607 SPRYD3Q8NCJ5 442 aa18.8■□□□□ 0.6
PABPC1-201ENST00000318607 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
PABPC1-201ENST00000318607 PNISRQ8TF01 805 aaKnown RBP18.78■□□□□ 0.6
PABPC1-201ENST00000318607 PODXL2Q9NZ53 605 aa18.77■□□□□ 0.59
PABPC1-201ENST00000318607 C20orf194Q5TEA3 1177 aa18.76■□□□□ 0.59
PABPC1-201ENST00000318607 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
PABPC1-201ENST00000318607 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
PABPC1-201ENST00000318607 HFM1A2PYH4 1435 aa18.75■□□□□ 0.59
PABPC1-201ENST00000318607 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
PABPC1-201ENST00000318607 FRAT1Q92837 279 aaPredicted RBP18.74■□□□□ 0.59
PABPC1-201ENST00000318607 CEP170Q5SW79 1584 aa18.74■□□□□ 0.59
PABPC1-201ENST00000318607 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-201ENST00000318607 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
PABPC1-201ENST00000318607 USP47Q96K76 1375 aa18.73■□□□□ 0.59
PABPC1-201ENST00000318607 ARID4BQ4LE39 1312 aaPredicted RBP18.72■□□□□ 0.59
PABPC1-201ENST00000318607 NFKBIBQ15653 356 aa18.72■□□□□ 0.59
PABPC1-201ENST00000318607 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
PABPC1-201ENST00000318607 CFDP1Q9UEE9 299 aaPredicted RBP18.7■□□□□ 0.58
PABPC1-201ENST00000318607 FRAT2O75474 233 aaPredicted RBP18.7■□□□□ 0.58
PABPC1-201ENST00000318607 BACH2Q9BYV9 841 aa18.7■□□□□ 0.58
PABPC1-201ENST00000318607 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
PABPC1-201ENST00000318607 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
PABPC1-201ENST00000318607 NEUROD2Q15784 382 aa18.69■□□□□ 0.58
PABPC1-201ENST00000318607 CASKIN1Q8WXD9 1431 aa18.68■□□□□ 0.58
PABPC1-201ENST00000318607 GSE1Q14687 1217 aa18.68■□□□□ 0.58
PABPC1-201ENST00000318607 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
PABPC1-201ENST00000318607 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
PABPC1-201ENST00000318607 GZF1Q9H116 711 aaPredicted RBP18.66■□□□□ 0.58
PABPC1-201ENST00000318607 NCOA1Q15788 1441 aa18.65■□□□□ 0.58
PABPC1-201ENST00000318607 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
PABPC1-201ENST00000318607 CANXP27824 592 aaKnown RBP18.65■□□□□ 0.58
PABPC1-201ENST00000318607 FYCO1Q9BQS8 1478 aa18.63■□□□□ 0.57
PABPC1-201ENST00000318607 KDM5BQ9UGL1 1544 aa18.62■□□□□ 0.57
PABPC1-201ENST00000318607 ARHGEF11O15085 1522 aa18.62■□□□□ 0.57
PABPC1-201ENST00000318607 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
PABPC1-201ENST00000318607 PTPN23Q9H3S7 1636 aa18.61■□□□□ 0.57
PABPC1-201ENST00000318607 NBPF1Q3BBV0 1214 aa18.61■□□□□ 0.57
PABPC1-201ENST00000318607 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
PABPC1-201ENST00000318607 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
PABPC1-201ENST00000318607 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
PABPC1-201ENST00000318607 IQGAP2Q13576 1575 aa18.57■□□□□ 0.56
PABPC1-201ENST00000318607 DDRGK1Q96HY6 314 aa18.57■□□□□ 0.56
PABPC1-201ENST00000318607 PANK3Q9H999 370 aa18.56■□□□□ 0.56
PABPC1-201ENST00000318607 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
PABPC1-201ENST00000318607 MYBBP1AQ9BQG0 1328 aaKnown RBP18.55■□□□□ 0.56
PABPC1-201ENST00000318607 NUP155O75694 1391 aa18.55■□□□□ 0.56
PABPC1-201ENST00000318607 ABCA8O94911 1581 aa18.55■□□□□ 0.56
PABPC1-201ENST00000318607 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
PABPC1-201ENST00000318607 ANKRD30BQ9BXX2 1392 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms