RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 RRP7BPQ9NSQ0 103 aa19.7■□□□□ 0.74
ATG4C-201ENST00000317868 ADGRL2O95490 1459 aa19.68■□□□□ 0.74
ATG4C-201ENST00000317868 GPATCH8Q9UKJ3 1502 aaKnown RBP19.68■□□□□ 0.74
ATG4C-201ENST00000317868 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
ATG4C-201ENST00000317868 POLR1AO95602 1720 aaPredicted RBP19.68■□□□□ 0.74
ATG4C-201ENST00000317868 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
ATG4C-201ENST00000317868 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
ATG4C-201ENST00000317868 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
ATG4C-201ENST00000317868 CHMP7Q8WUX9 453 aaPredicted RBP19.63■□□□□ 0.73
ATG4C-201ENST00000317868 CDK11AQ9UQ88 783 aaPredicted RBP19.63■□□□□ 0.73
ATG4C-201ENST00000317868 RPRD2Q5VT52 1461 aaKnown RBP19.63■□□□□ 0.73
ATG4C-201ENST00000317868 ABCC10Q5T3U5 1492 aa19.63■□□□□ 0.73
ATG4C-201ENST00000317868 TEX14Q8IWB6 1497 aa19.63■□□□□ 0.73
ATG4C-201ENST00000317868 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
ATG4C-201ENST00000317868 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
ATG4C-201ENST00000317868 ANKRD30BQ9BXX2 1392 aa19.61■□□□□ 0.73
ATG4C-201ENST00000317868 CHD1O14646 1710 aa19.61■□□□□ 0.73
ATG4C-201ENST00000317868 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
ATG4C-201ENST00000317868 PZPP20742 1482 aa19.6■□□□□ 0.73
ATG4C-201ENST00000317868 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
ATG4C-201ENST00000317868 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
ATG4C-201ENST00000317868 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
ATG4C-201ENST00000317868 NCOA1Q15788 1441 aa19.58■□□□□ 0.73
ATG4C-201ENST00000317868 JPH4Q96JJ6 628 aa19.58■□□□□ 0.73
ATG4C-201ENST00000317868 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
ATG4C-201ENST00000317868 ATP10BO94823 1461 aa19.57■□□□□ 0.72
ATG4C-201ENST00000317868 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
ATG4C-201ENST00000317868 ARHGEF5Q12774 1597 aa19.54■□□□□ 0.72
ATG4C-201ENST00000317868 CDC42BPBQ9Y5S2 1711 aa19.53■□□□□ 0.72
ATG4C-201ENST00000317868 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
ATG4C-201ENST00000317868 PREX2Q70Z35 1606 aa19.53■□□□□ 0.72
ATG4C-201ENST00000317868 KDM5DQ9BY66 1539 aa19.52■□□□□ 0.72
ATG4C-201ENST00000317868 MBD5Q9P267 1494 aa19.52■□□□□ 0.72
ATG4C-201ENST00000317868 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
ATG4C-201ENST00000317868 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
ATG4C-201ENST00000317868 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
ATG4C-201ENST00000317868 SPATA31E1Q6ZUB1 1445 aa19.46■□□□□ 0.71
ATG4C-201ENST00000317868 ANP32CO43423 234 aa19.45■□□□□ 0.7
ATG4C-201ENST00000317868 SAMD9LQ8IVG5 1584 aa19.45■□□□□ 0.7
ATG4C-201ENST00000317868 WASHC2AQ641Q2 1341 aa19.45■□□□□ 0.7
ATG4C-201ENST00000317868 FBLN2P98095 1184 aa19.45■□□□□ 0.7
ATG4C-201ENST00000317868 KIAA1107Q9UPP5 1409 aa19.44■□□□□ 0.7
ATG4C-201ENST00000317868 HSPA5P11021 654 aaKnown RBP19.44■□□□□ 0.7
ATG4C-201ENST00000317868 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
ATG4C-201ENST00000317868 FOXD1Q16676 465 aa19.44■□□□□ 0.7
ATG4C-201ENST00000317868 C9orf84Q5VXU9 1444 aa19.41■□□□□ 0.7
ATG4C-201ENST00000317868 MAST1Q9Y2H9 1570 aa19.41■□□□□ 0.7
ATG4C-201ENST00000317868 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
ATG4C-201ENST00000317868 ANKRD50Q9ULJ7 1429 aa19.41■□□□□ 0.7
ATG4C-201ENST00000317868 PTPRGP23470 1445 aa19.4■□□□□ 0.7
ATG4C-201ENST00000317868 EIF4G2P78344 907 aaKnown RBP eCLIP19.39■□□□□ 0.69
ATG4C-201ENST00000317868 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
ATG4C-201ENST00000317868 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
ATG4C-201ENST00000317868 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
ATG4C-201ENST00000317868 TTC37Q6PGP7 1564 aa19.38■□□□□ 0.69
ATG4C-201ENST00000317868 MYO5CQ9NQX4 1742 aa19.37■□□□□ 0.69
ATG4C-201ENST00000317868 KDM5CP41229 1560 aa19.37■□□□□ 0.69
ATG4C-201ENST00000317868 ARHGEF12Q9NZN5 1544 aa19.36■□□□□ 0.69
ATG4C-201ENST00000317868 CCDC7Q96M83 1385 aa19.35■□□□□ 0.69
ATG4C-201ENST00000317868 BCORL1Q5H9F3 1711 aa19.35■□□□□ 0.69
ATG4C-201ENST00000317868 UNC13BO14795 1591 aa19.34■□□□□ 0.69
ATG4C-201ENST00000317868 ABCC2Q92887 1545 aa19.34■□□□□ 0.69
ATG4C-201ENST00000317868 CCDC141Q6ZP82 1450 aa19.34■□□□□ 0.69
ATG4C-201ENST00000317868 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
ATG4C-201ENST00000317868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATG4C-201ENST00000317868 PLXNC1O60486 1568 aa19.33■□□□□ 0.68
ATG4C-201ENST00000317868 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
ATG4C-201ENST00000317868 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
ATG4C-201ENST00000317868 C11orf95C9JLR9 678 aaPredicted RBP19.3■□□□□ 0.68
ATG4C-201ENST00000317868 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
ATG4C-201ENST00000317868 RALGAPBQ86X10 1494 aa19.28■□□□□ 0.68
ATG4C-201ENST00000317868 SYCP2Q9BX26 1530 aa19.28■□□□□ 0.68
ATG4C-201ENST00000317868 KIF15Q9NS87 1388 aa19.26■□□□□ 0.67
ATG4C-201ENST00000317868 ZCCHC11Q5TAX3 1644 aaKnown RBP19.26■□□□□ 0.67
ATG4C-201ENST00000317868 FAM135AQ9P2D6 1515 aa19.26■□□□□ 0.67
ATG4C-201ENST00000317868 IQGAP3Q86VI3 1631 aa19.26■□□□□ 0.67
ATG4C-201ENST00000317868 PKD2Q13563 968 aa19.25■□□□□ 0.67
ATG4C-201ENST00000317868 KIF7Q2M1P5 1343 aa19.23■□□□□ 0.67
ATG4C-201ENST00000317868 E9PCH4 1651 aa19.22■□□□□ 0.67
ATG4C-201ENST00000317868 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
ATG4C-201ENST00000317868 NUP155O75694 1391 aa19.22■□□□□ 0.67
ATG4C-201ENST00000317868 MAGI2Q86UL8 1455 aa19.22■□□□□ 0.67
ATG4C-201ENST00000317868 ARHGAP5Q13017 1502 aa19.21■□□□□ 0.67
ATG4C-201ENST00000317868 RSPH4AQ5TD94 716 aa19.21■□□□□ 0.67
ATG4C-201ENST00000317868 TRPM1Q7Z4N2 1603 aa19.21■□□□□ 0.67
ATG4C-201ENST00000317868 PLEKHH2Q8IVE3 1493 aa19.2■□□□□ 0.66
ATG4C-201ENST00000317868 TSPY4P0CV99 314 aa19.19■□□□□ 0.66
ATG4C-201ENST00000317868 TSPY10P0CW01 314 aa19.19■□□□□ 0.66
ATG4C-201ENST00000317868 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
ATG4C-201ENST00000317868 LAMC1P11047 1609 aa19.18■□□□□ 0.66
ATG4C-201ENST00000317868 PRKRIP1Q9H875 184 aaPredicted RBP19.18■□□□□ 0.66
ATG4C-201ENST00000317868 USP47Q96K76 1375 aa19.18■□□□□ 0.66
ATG4C-201ENST00000317868 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
ATG4C-201ENST00000317868 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
ATG4C-201ENST00000317868 ABCC1P33527 1531 aa19.16■□□□□ 0.66
ATG4C-201ENST00000317868 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.66
ATG4C-201ENST00000317868 ARAP3Q8WWN8 1544 aa19.14■□□□□ 0.65
ATG4C-201ENST00000317868 ATP10AO60312 1499 aa19.12■□□□□ 0.65
ATG4C-201ENST00000317868 PLA2R1Q13018 1463 aa19.11■□□□□ 0.65
ATG4C-201ENST00000317868 CCDC184Q52MB2 194 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms