RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 PCF11O94913 1555 aaKnown RBP18.99■□□□□ 0.63
CSNK1D-202ENST00000314028 NCOA2Q15596 1464 aa18.99■□□□□ 0.63
CSNK1D-202ENST00000314028 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
CSNK1D-202ENST00000314028 MYOM3Q5VTT5 1437 aa18.98■□□□□ 0.63
CSNK1D-202ENST00000314028 ST20-MTHFSA0A0A6YYL1 179 aa18.98■□□□□ 0.63
CSNK1D-202ENST00000314028 RCAN3Q9UKA8 241 aa18.98■□□□□ 0.63
CSNK1D-202ENST00000314028 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-202ENST00000314028 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
CSNK1D-202ENST00000314028 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
CSNK1D-202ENST00000314028 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-202ENST00000314028 PTPRKQ15262 1439 aa18.96■□□□□ 0.63
CSNK1D-202ENST00000314028 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
CSNK1D-202ENST00000314028 NAIPQ13075 1403 aa18.96■□□□□ 0.63
CSNK1D-202ENST00000314028 WDR43Q15061 677 aaKnown RBP eCLIP18.94■□□□□ 0.62
CSNK1D-202ENST00000314028 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.94■□□□□ 0.62
CSNK1D-202ENST00000314028 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
CSNK1D-202ENST00000314028 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
CSNK1D-202ENST00000314028 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.621e-7■■■■■ 36.9
CSNK1D-202ENST00000314028 USP47Q96K76 1375 aa18.91■□□□□ 0.62
CSNK1D-202ENST00000314028 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
CSNK1D-202ENST00000314028 PLEKHD1A6NEE1 506 aa18.9■□□□□ 0.62
CSNK1D-202ENST00000314028 NESP48681 1621 aa18.89■□□□□ 0.61
CSNK1D-202ENST00000314028 FYCO1Q9BQS8 1478 aa18.89■□□□□ 0.61
CSNK1D-202ENST00000314028 NUP155O75694 1391 aa18.89■□□□□ 0.61
CSNK1D-202ENST00000314028 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
CSNK1D-202ENST00000314028 CDCA7LQ96GN5 454 aa18.87■□□□□ 0.61
CSNK1D-202ENST00000314028 PDE4AP27815 886 aa18.86■□□□□ 0.61
CSNK1D-202ENST00000314028 RRP1P56182 461 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-202ENST00000314028 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.61
CSNK1D-202ENST00000314028 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■■■■■ 31.3
CSNK1D-202ENST00000314028 IL27Q8NEV9 243 aa18.82■□□□□ 0.6
CSNK1D-202ENST00000314028 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
CSNK1D-202ENST00000314028 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
CSNK1D-202ENST00000314028 KNSTRNQ9Y448 316 aa18.79■□□□□ 0.6
CSNK1D-202ENST00000314028 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-202ENST00000314028 TCERG1O14776 1098 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-202ENST00000314028 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-202ENST00000314028 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
CSNK1D-202ENST00000314028 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
CSNK1D-202ENST00000314028 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
CSNK1D-202ENST00000314028 PNISRQ8TF01 805 aaKnown RBP18.77■□□□□ 0.59
CSNK1D-202ENST00000314028 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.59
CSNK1D-202ENST00000314028 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-202ENST00000314028 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
CSNK1D-202ENST00000314028 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
CSNK1D-202ENST00000314028 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
CSNK1D-202ENST00000314028 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
CSNK1D-202ENST00000314028 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
CSNK1D-202ENST00000314028 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-202ENST00000314028 RALBP1Q15311 655 aa18.74■□□□□ 0.59
CSNK1D-202ENST00000314028 MAP3K1Q13233 1512 aa18.74■□□□□ 0.59
CSNK1D-202ENST00000314028 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
CSNK1D-202ENST00000314028 SPRYD3Q8NCJ5 442 aa18.73■□□□□ 0.59
CSNK1D-202ENST00000314028 PANK3Q9H999 370 aa18.73■□□□□ 0.59
CSNK1D-202ENST00000314028 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
CSNK1D-202ENST00000314028 CDK13Q14004 1512 aaKnown RBP18.72■□□□□ 0.59
CSNK1D-202ENST00000314028 KIF15Q9NS87 1388 aa18.71■□□□□ 0.59
CSNK1D-202ENST00000314028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.71■□□□□ 0.592e-11■■■■■ 30.8
CSNK1D-202ENST00000314028 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
CSNK1D-202ENST00000314028 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-202ENST00000314028 ANKRD30AQ9BXX3 1397 aa18.69■□□□□ 0.58
CSNK1D-202ENST00000314028 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
CSNK1D-202ENST00000314028 TMF1P82094 1093 aa18.68■□□□□ 0.58
CSNK1D-202ENST00000314028 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
CSNK1D-202ENST00000314028 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
CSNK1D-202ENST00000314028 ANKRD30BQ9BXX2 1392 aa18.65■□□□□ 0.58
CSNK1D-202ENST00000314028 SMG6Q86US8 1419 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-202ENST00000314028 UPF2Q9HAU5 1272 aaKnown RBP18.64■□□□□ 0.57
CSNK1D-202ENST00000314028 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
CSNK1D-202ENST00000314028 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
CSNK1D-202ENST00000314028 SUPT6HQ7KZ85 1726 aaKnown RBP18.59■□□□□ 0.57
CSNK1D-202ENST00000314028 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
CSNK1D-202ENST00000314028 ADAMTS8Q9UP79 889 aa18.59■□□□□ 0.57
CSNK1D-202ENST00000314028 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
CSNK1D-202ENST00000314028 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
CSNK1D-202ENST00000314028 PRG4Q92954 1404 aaPredicted RBP18.58■□□□□ 0.57
CSNK1D-202ENST00000314028 BACH2Q9BYV9 841 aa18.58■□□□□ 0.57
CSNK1D-202ENST00000314028 BCL2L13Q9BXK5 485 aa18.58■□□□□ 0.56
CSNK1D-202ENST00000314028 ABCA10Q8WWZ4 1543 aa18.57■□□□□ 0.56
CSNK1D-202ENST00000314028 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
CSNK1D-202ENST00000314028 DAPK1P53355 1430 aa18.57■□□□□ 0.56
CSNK1D-202ENST00000314028 GOLGA2Q08379 1002 aa18.57■□□□□ 0.56
CSNK1D-202ENST00000314028 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
CSNK1D-202ENST00000314028 GZF1Q9H116 711 aaPredicted RBP18.56■□□□□ 0.56
CSNK1D-202ENST00000314028 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
CSNK1D-202ENST00000314028 JPH4Q96JJ6 628 aa18.56■□□□□ 0.56
CSNK1D-202ENST00000314028 NFKBIBQ15653 356 aa18.55■□□□□ 0.56
CSNK1D-202ENST00000314028 EPRSP07814 1512 aaKnown RBP18.55■□□□□ 0.56
CSNK1D-202ENST00000314028 APAF1O14727 1248 aa18.54■□□□□ 0.56
CSNK1D-202ENST00000314028 HSP90AA1P07900 732 aaKnown RBP18.54■□□□□ 0.56
CSNK1D-202ENST00000314028 GSE1Q14687 1217 aa18.54■□□□□ 0.56
CSNK1D-202ENST00000314028 ABCC5O15440 1437 aa18.52■□□□□ 0.55
CSNK1D-202ENST00000314028 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.55
CSNK1D-202ENST00000314028 BECN1Q14457 450 aa18.51■□□□□ 0.55
CSNK1D-202ENST00000314028 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
CSNK1D-202ENST00000314028 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
CSNK1D-202ENST00000314028 SNAPC4Q5SXM2 1469 aa18.5■□□□□ 0.55
CSNK1D-202ENST00000314028 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
CSNK1D-202ENST00000314028 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
CSNK1D-202ENST00000314028 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms