RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 RTF1Q92541 710 aaKnown RBP24.17■■□□□ 1.46
NR1D2-201ENST00000312521 SETD5Q9C0A6 1442 aa24.17■■□□□ 1.46
NR1D2-201ENST00000312521 PKD2Q13563 968 aa24.16■■□□□ 1.46
NR1D2-201ENST00000312521 IPO8O15397 1037 aaKnown RBP24.15■■□□□ 1.46
NR1D2-201ENST00000312521 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
NR1D2-201ENST00000312521 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.46
NR1D2-201ENST00000312521 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.45
NR1D2-201ENST00000312521 KTN1Q86UP2 1357 aaKnown RBP24.13■■□□□ 1.45
NR1D2-201ENST00000312521 GGT6Q6P531 493 aa24.13■■□□□ 1.45
NR1D2-201ENST00000312521 STK26Q9P289 416 aa24.08■■□□□ 1.45
NR1D2-201ENST00000312521 ARHGAP35Q9NRY4 1499 aa24.08■■□□□ 1.45
NR1D2-201ENST00000312521 CALD1Q05682 793 aaKnown RBP24.07■■□□□ 1.44
NR1D2-201ENST00000312521 RTN4Q9NQC3 1192 aaKnown RBP24.07■■□□□ 1.44
NR1D2-201ENST00000312521 SOGA1O94964 1423 aa24.07■■□□□ 1.44
NR1D2-201ENST00000312521 L1TD1Q5T7N2 865 aaKnown RBP24.06■■□□□ 1.44
NR1D2-201ENST00000312521 CHAF1AQ13111 956 aaPredicted RBP24.05■■□□□ 1.44
NR1D2-201ENST00000312521 U2AF1L5P0DN76 240 aaPredicted RBP24.04■■□□□ 1.44
NR1D2-201ENST00000312521 U2AF1Q01081 240 aaKnown RBP eCLIP24.04■■□□□ 1.44
NR1D2-201ENST00000312521 VPS8Q8N3P4 1428 aa24.04■■□□□ 1.44
NR1D2-201ENST00000312521 TRHP20396 242 aaPredicted RBP24.04■■□□□ 1.44
NR1D2-201ENST00000312521 RALBP1Q15311 655 aa24.04■■□□□ 1.44
NR1D2-201ENST00000312521 KIAA1211Q6ZU35 1233 aa24.03■■□□□ 1.44
NR1D2-201ENST00000312521 RCAN3Q9UKA8 241 aa24.01■■□□□ 1.43
NR1D2-201ENST00000312521 RWDD1Q9H446 243 aaPredicted RBP24.01■■□□□ 1.43
NR1D2-201ENST00000312521 FOXD1Q16676 465 aa24■■□□□ 1.43
NR1D2-201ENST00000312521 SPRYD3Q8NCJ5 442 aa24■■□□□ 1.43
NR1D2-201ENST00000312521 CARMIL2Q6F5E8 1435 aa24■■□□□ 1.43
NR1D2-201ENST00000312521 APBB1O00213 710 aa24■■□□□ 1.43
NR1D2-201ENST00000312521 MSNP26038 577 aaKnown RBP23.99■■□□□ 1.43
NR1D2-201ENST00000312521 CHMP4AQ9BY43 222 aa23.99■■□□□ 1.43
NR1D2-201ENST00000312521 EFCAB2Q5VUJ9 269 aa23.99■■□□□ 1.43
NR1D2-201ENST00000312521 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
NR1D2-201ENST00000312521 ROCK2O75116 1388 aaKnown RBP23.98■■□□□ 1.43
NR1D2-201ENST00000312521 NUP155O75694 1391 aa23.97■■□□□ 1.43
NR1D2-201ENST00000312521 KANK4Q5T7N3 995 aaPredicted RBP23.97■■□□□ 1.43
NR1D2-201ENST00000312521 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
NR1D2-201ENST00000312521 DRC7Q8IY82 874 aa23.95■■□□□ 1.43
NR1D2-201ENST00000312521 RBM19Q9Y4C8 960 aaKnown RBP23.95■■□□□ 1.42
NR1D2-201ENST00000312521 GNL2Q13823 731 aaKnown RBP23.95■■□□□ 1.42
NR1D2-201ENST00000312521 ITPRIPQ8IWB1 547 aa23.94■■□□□ 1.42
NR1D2-201ENST00000312521 PAK3O75914 559 aaPredicted RBP23.94■■□□□ 1.42
NR1D2-201ENST00000312521 GBP4Q96PP9 640 aa23.93■■□□□ 1.42
NR1D2-201ENST00000312521 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
NR1D2-201ENST00000312521 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
NR1D2-201ENST00000312521 ISY1Q9ULR0 285 aaKnown RBP23.92■■□□□ 1.42
NR1D2-201ENST00000312521 PTMSP20962 102 aa23.91■■□□□ 1.42
NR1D2-201ENST00000312521 CSB-PGBD3P0DP91 1061 aa23.9■■□□□ 1.42
NR1D2-201ENST00000312521 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.42
NR1D2-201ENST00000312521 FMN1Q68DA7 1419 aa23.89■■□□□ 1.42
NR1D2-201ENST00000312521 STK31Q9BXU1 1019 aa23.89■■□□□ 1.41
NR1D2-201ENST00000312521 EIF3AQ14152 1382 aaKnown RBP23.88■■□□□ 1.41
NR1D2-201ENST00000312521 PMFBP1Q8TBY8 1022 aa23.87■■□□□ 1.41
NR1D2-201ENST00000312521 HDAC5Q9UQL6 1122 aa23.87■■□□□ 1.41
NR1D2-201ENST00000312521 DEKP35659 375 aaKnown RBP23.86■■□□□ 1.41
NR1D2-201ENST00000312521 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
NR1D2-201ENST00000312521 TERF2IPQ9NYB0 399 aa23.86■■□□□ 1.41
NR1D2-201ENST00000312521 HTATSF1O43719 755 aaKnown RBP23.85■■□□□ 1.41
NR1D2-201ENST00000312521 ZNF330Q9Y3S2 320 aaPredicted RBP23.84■■□□□ 1.41
NR1D2-201ENST00000312521 CLSTN1O94985 981 aa23.84■■□□□ 1.41
NR1D2-201ENST00000312521 KIF3BO15066 747 aa23.83■■□□□ 1.4
NR1D2-201ENST00000312521 SMC4Q9NTJ3 1288 aa23.83■■□□□ 1.4
NR1D2-201ENST00000312521 HMMRO75330 724 aa23.82■■□□□ 1.4
NR1D2-201ENST00000312521 SLKQ9H2G2 1235 aaPredicted RBP23.81■■□□□ 1.4
NR1D2-201ENST00000312521 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
NR1D2-201ENST00000312521 KIAA2012Q0VF49 1180 aa23.79■■□□□ 1.4
NR1D2-201ENST00000312521 GORABQ5T7V8 394 aa23.79■■□□□ 1.4
NR1D2-201ENST00000312521 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
NR1D2-201ENST00000312521 SYAP1Q96A49 352 aaPredicted RBP23.79■■□□□ 1.4
NR1D2-201ENST00000312521 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
NR1D2-201ENST00000312521 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
NR1D2-201ENST00000312521 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
NR1D2-201ENST00000312521 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
NR1D2-201ENST00000312521 GPATCH3Q96I76 525 aa23.77■■□□□ 1.4
NR1D2-201ENST00000312521 LMOD3Q0VAK6 560 aa23.75■■□□□ 1.39
NR1D2-201ENST00000312521 MFAP1P55081 439 aaKnown RBP23.75■■□□□ 1.39
NR1D2-201ENST00000312521 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
NR1D2-201ENST00000312521 GZF1Q9H116 711 aaPredicted RBP23.74■■□□□ 1.39
NR1D2-201ENST00000312521 CENPJQ9HC77 1338 aaPredicted RBP23.72■■□□□ 1.39
NR1D2-201ENST00000312521 TRIM6-TRIM34B2RNG4 842 aa23.72■■□□□ 1.39
NR1D2-201ENST00000312521 CCDC34Q96HJ3 373 aa23.72■■□□□ 1.39
NR1D2-201ENST00000312521 TAF7LQ5H9L4 462 aa23.72■■□□□ 1.39
NR1D2-201ENST00000312521 CLUAP1Q96AJ1 413 aa23.72■■□□□ 1.39
NR1D2-201ENST00000312521 HNRNPMP52272 730 aaKnown RBP eCLIP23.72■■□□□ 1.39
NR1D2-201ENST00000312521 CHMP3Q9Y3E7 222 aa23.72■■□□□ 1.39
NR1D2-201ENST00000312521 EID1Q9Y6B2 187 aa23.72■■□□□ 1.39
NR1D2-201ENST00000312521 NGDNQ8NEJ9 315 aaKnown RBP23.71■■□□□ 1.39
NR1D2-201ENST00000312521 SLC4A10Q6U841 1118 aa23.7■■□□□ 1.38
NR1D2-201ENST00000312521 TMX4Q9H1E5 349 aaPredicted RBP23.7■■□□□ 1.38
NR1D2-201ENST00000312521 WASHC2CQ9Y4E1 1318 aa23.69■■□□□ 1.38
NR1D2-201ENST00000312521 CCDC146Q8IYE0 955 aa23.68■■□□□ 1.38
NR1D2-201ENST00000312521 TPM4P67936 248 aa23.68■■□□□ 1.38
NR1D2-201ENST00000312521 AMPHP49418 695 aa23.67■■□□□ 1.38
NR1D2-201ENST00000312521 PHLDB1Q86UU1 1377 aa23.67■■□□□ 1.38
NR1D2-201ENST00000312521 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
NR1D2-201ENST00000312521 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.38
NR1D2-201ENST00000312521 CSPP1Q1MSJ5 1256 aa23.64■■□□□ 1.38
NR1D2-201ENST00000312521 IPO9Q96P70 1041 aaKnown RBP23.64■■□□□ 1.37
NR1D2-201ENST00000312521 GOLGA6L3A6NEY3 463 aa23.62■■□□□ 1.37
NR1D2-201ENST00000312521 NCBP3Q53F19 620 aaKnown RBP23.61■■□□□ 1.37
NR1D2-201ENST00000312521 NUTM2DQ5VT03 806 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms