RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
GGA2-201ENST00000309859 HSP90AB1P08238 724 aaKnown RBP13.96□□□□□ -0.18
GGA2-201ENST00000309859 BACH2Q9BYV9 841 aa13.95□□□□□ -0.18
GGA2-201ENST00000309859 GOLGA6L22H0YM25 854 aa13.94□□□□□ -0.18
GGA2-201ENST00000309859 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
GGA2-201ENST00000309859 WASHC2AQ641Q2 1341 aa13.92□□□□□ -0.18
GGA2-201ENST00000309859 MFAP1P55081 439 aaKnown RBP13.92□□□□□ -0.18
GGA2-201ENST00000309859 RRP9O43818 475 aaKnown RBP13.91□□□□□ -0.18
GGA2-201ENST00000309859 ABCC9O60706 1549 aa13.91□□□□□ -0.18
GGA2-201ENST00000309859 WDR97A6NE52 1622 aa13.91□□□□□ -0.18
GGA2-201ENST00000309859 R3HCC1Q9Y3T6 440 aaKnown RBP13.91□□□□□ -0.18
GGA2-201ENST00000309859 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
GGA2-201ENST00000309859 ZHX1Q9UKY1 873 aaPredicted RBP13.9□□□□□ -0.18
GGA2-201ENST00000309859 CARD11Q9BXL7 1154 aa13.89□□□□□ -0.19
GGA2-201ENST00000309859 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
GGA2-201ENST00000309859 BCL11BQ9C0K0 894 aaPredicted RBP13.87□□□□□ -0.19
GGA2-201ENST00000309859 MS4A1P11836 297 aa13.87□□□□□ -0.19
GGA2-201ENST00000309859 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
GGA2-201ENST00000309859 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
GGA2-201ENST00000309859 RRAGDQ9NQL2 400 aaPredicted RBP13.86□□□□□ -0.19
GGA2-201ENST00000309859 RGL3Q3MIN7 710 aa13.86□□□□□ -0.19
GGA2-201ENST00000309859 DCAF11Q8TEB1 546 aa13.85□□□□□ -0.19
GGA2-201ENST00000309859 RAPGEF2Q9Y4G8 1499 aa13.83□□□□□ -0.19
GGA2-201ENST00000309859 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.2
GGA2-201ENST00000309859 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
GGA2-201ENST00000309859 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
GGA2-201ENST00000309859 PANK2Q9BZ23 570 aa13.82□□□□□ -0.2
GGA2-201ENST00000309859 PDE4CQ08493 712 aa13.82□□□□□ -0.2
GGA2-201ENST00000309859 MROH2BQ7Z745 1585 aa13.82□□□□□ -0.2
GGA2-201ENST00000309859 CLUAP1Q96AJ1 413 aa13.8□□□□□ -0.2
GGA2-201ENST00000309859 CCDC146Q8IYE0 955 aa13.8□□□□□ -0.2
GGA2-201ENST00000309859 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
GGA2-201ENST00000309859 MPNDQ8N594 471 aa13.79□□□□□ -0.2
GGA2-201ENST00000309859 CENPQQ7L2Z9 268 aaPredicted RBP13.78□□□□□ -0.2
GGA2-201ENST00000309859 TRAK2O60296 914 aa13.78□□□□□ -0.2
GGA2-201ENST00000309859 FTSJ3Q8IY81 847 aaKnown RBP13.78□□□□□ -0.2
GGA2-201ENST00000309859 WASHC2CQ9Y4E1 1318 aa13.78□□□□□ -0.2
GGA2-201ENST00000309859 ESPNB1AK53 854 aa13.77□□□□□ -0.2
GGA2-201ENST00000309859 GBP4Q96PP9 640 aa13.77□□□□□ -0.2
GGA2-201ENST00000309859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.213e-7■■■■□ 19.8
GGA2-201ENST00000309859 ZNF771Q7L3S4 317 aaPredicted RBP13.77□□□□□ -0.21
GGA2-201ENST00000309859 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
GGA2-201ENST00000309859 WIZO95785 1651 aa13.76□□□□□ -0.21
GGA2-201ENST00000309859 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
GGA2-201ENST00000309859 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
GGA2-201ENST00000309859 NACADO15069 1562 aa13.74□□□□□ -0.21
GGA2-201ENST00000309859 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
GGA2-201ENST00000309859 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
GGA2-201ENST00000309859 MRE11P49959 708 aa13.74□□□□□ -0.21
GGA2-201ENST00000309859 TPM2P07951 284 aa13.74□□□□□ -0.21
GGA2-201ENST00000309859 KIF7Q2M1P5 1343 aa13.73□□□□□ -0.21
GGA2-201ENST00000309859 KTN1Q86UP2 1357 aaKnown RBP13.72□□□□□ -0.21
GGA2-201ENST00000309859 CNTLNQ9NXG0 1405 aa13.72□□□□□ -0.21
GGA2-201ENST00000309859 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
GGA2-201ENST00000309859 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
GGA2-201ENST00000309859 BBXQ8WY36 941 aaPredicted RBP13.72□□□□□ -0.21
GGA2-201ENST00000309859 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
GGA2-201ENST00000309859 DDX11L8A8MPP1 907 aa13.71□□□□□ -0.22
GGA2-201ENST00000309859 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.22
GGA2-201ENST00000309859 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.22
GGA2-201ENST00000309859 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.71□□□□□ -0.22
GGA2-201ENST00000309859 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
GGA2-201ENST00000309859 UQCRHP07919 91 aa13.7□□□□□ -0.22
GGA2-201ENST00000309859 TNNT3P45378 269 aaPredicted RBP13.7□□□□□ -0.22
GGA2-201ENST00000309859 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
GGA2-201ENST00000309859 KNSTRNQ9Y448 316 aa13.7□□□□□ -0.22
GGA2-201ENST00000309859 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.228e-7■■□□□ 11.8
GGA2-201ENST00000309859 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
GGA2-201ENST00000309859 CALD1Q05682 793 aaKnown RBP13.69□□□□□ -0.22
GGA2-201ENST00000309859 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
GGA2-201ENST00000309859 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
GGA2-201ENST00000309859 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
GGA2-201ENST00000309859 CBX1P83916 185 aa13.67□□□□□ -0.22
GGA2-201ENST00000309859 NOL8Q76FK4 1167 aaKnown RBP13.67□□□□□ -0.22
GGA2-201ENST00000309859 RNF214Q8ND24 703 aa13.67□□□□□ -0.22
GGA2-201ENST00000309859 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
GGA2-201ENST00000309859 CHMP5Q9NZZ3 219 aa13.66□□□□□ -0.22
GGA2-201ENST00000309859 APBB1O00213 710 aa13.65□□□□□ -0.22
GGA2-201ENST00000309859 XPCQ01831 940 aaPredicted RBP13.65□□□□□ -0.22
GGA2-201ENST00000309859 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
GGA2-201ENST00000309859 KIF21BO75037 1637 aa13.64□□□□□ -0.23
GGA2-201ENST00000309859 MCM4P33991 863 aa13.63□□□□□ -0.23
GGA2-201ENST00000309859 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
GGA2-201ENST00000309859 MYBBP1AQ9BQG0 1328 aaKnown RBP13.63□□□□□ -0.23
GGA2-201ENST00000309859 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
GGA2-201ENST00000309859 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
GGA2-201ENST00000309859 RALBP1Q15311 655 aa13.62□□□□□ -0.23
GGA2-201ENST00000309859 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
GGA2-201ENST00000309859 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
GGA2-201ENST00000309859 IGSF3O75054 1194 aa13.62□□□□□ -0.23
GGA2-201ENST00000309859 CLCN1P35523 988 aa13.62□□□□□ -0.23
GGA2-201ENST00000309859 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
GGA2-201ENST00000309859 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
GGA2-201ENST00000309859 VGLL3A8MV65 326 aa13.61□□□□□ -0.23
GGA2-201ENST00000309859 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
GGA2-201ENST00000309859 E9PSI1 815 aa13.61□□□□□ -0.23
GGA2-201ENST00000309859 CHMP4AQ9BY43 222 aa13.61□□□□□ -0.23
GGA2-201ENST00000309859 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
GGA2-201ENST00000309859 PHLDB1Q86UU1 1377 aa13.6□□□□□ -0.23
GGA2-201ENST00000309859 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms