RNA–Protein interactions for RNA: ENST00000307297.8

PATJ-201, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 2 BASIC

Gene PATJ, Length 1,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-201ENST00000307297 ARAP3Q8WWN8 1544 aa17.15■□□□□ 0.34
PATJ-201ENST00000307297 PPRC1Q5VV67 1664 aaKnown RBP17.14■□□□□ 0.33
PATJ-201ENST00000307297 PPARGC1BQ86YN6 1023 aaKnown RBP17.14■□□□□ 0.33
PATJ-201ENST00000307297 PLCH2O75038 1416 aa17.13■□□□□ 0.33
PATJ-201ENST00000307297 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
PATJ-201ENST00000307297 FANCAO15360 1455 aa17.11■□□□□ 0.33
PATJ-201ENST00000307297 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
PATJ-201ENST00000307297 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
PATJ-201ENST00000307297 NEO1Q92859 1461 aa17.08■□□□□ 0.32
PATJ-201ENST00000307297 EFCAB2Q5VUJ9 269 aa17.08■□□□□ 0.32
PATJ-201ENST00000307297 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.32
PATJ-201ENST00000307297 MIA2Q96PC5 1412 aa17.06■□□□□ 0.32
PATJ-201ENST00000307297 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
PATJ-201ENST00000307297 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
PATJ-201ENST00000307297 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
PATJ-201ENST00000307297 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
PATJ-201ENST00000307297 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
PATJ-201ENST00000307297 ADGRL1O94910 1474 aa17.03■□□□□ 0.32
PATJ-201ENST00000307297 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
PATJ-201ENST00000307297 CAMSAP2Q08AD1 1489 aa17.03■□□□□ 0.32
PATJ-201ENST00000307297 ABCC1P33527 1531 aa17.02■□□□□ 0.32
PATJ-201ENST00000307297 FOXD1Q16676 465 aa17.02■□□□□ 0.31
PATJ-201ENST00000307297 KDM6BO15054 1643 aa17■□□□□ 0.31
PATJ-201ENST00000307297 SYCP2Q9BX26 1530 aa16.99■□□□□ 0.31
PATJ-201ENST00000307297 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
PATJ-201ENST00000307297 SCAPERQ9BY12 1400 aa16.97■□□□□ 0.31
PATJ-201ENST00000307297 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.31
PATJ-201ENST00000307297 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
PATJ-201ENST00000307297 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
PATJ-201ENST00000307297 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
PATJ-201ENST00000307297 ZNF518AQ6AHZ1 1483 aa16.95■□□□□ 0.3
PATJ-201ENST00000307297 ZNF644Q9H582 1327 aaPredicted RBP16.94■□□□□ 0.3
PATJ-201ENST00000307297 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
PATJ-201ENST00000307297 ARHGEF5Q12774 1597 aa16.94■□□□□ 0.3
PATJ-201ENST00000307297 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
PATJ-201ENST00000307297 CROCC2H7BZ55 1655 aa16.93■□□□□ 0.3
PATJ-201ENST00000307297 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
PATJ-201ENST00000307297 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
PATJ-201ENST00000307297 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
PATJ-201ENST00000307297 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
PATJ-201ENST00000307297 ARHGEF12Q9NZN5 1544 aa16.91■□□□□ 0.3
PATJ-201ENST00000307297 HNRNPMP52272 730 aaKnown RBP eCLIP16.91■□□□□ 0.3
PATJ-201ENST00000307297 FRMPD1Q5SYB0 1578 aa16.91■□□□□ 0.3
PATJ-201ENST00000307297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
PATJ-201ENST00000307297 RSPH4AQ5TD94 716 aa16.9■□□□□ 0.3
PATJ-201ENST00000307297 KDM5CP41229 1560 aa16.89■□□□□ 0.3
PATJ-201ENST00000307297 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
PATJ-201ENST00000307297 TRAPPC8Q9Y2L5 1435 aa16.89■□□□□ 0.29
PATJ-201ENST00000307297 HECW2Q9P2P5 1572 aa16.89■□□□□ 0.29
PATJ-201ENST00000307297 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
PATJ-201ENST00000307297 RAPGEF3O95398 923 aa16.88■□□□□ 0.29
PATJ-201ENST00000307297 COL17A1Q9UMD9 1497 aaPredicted RBP16.87■□□□□ 0.29
PATJ-201ENST00000307297 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
PATJ-201ENST00000307297 DAPK1P53355 1430 aa16.87■□□□□ 0.29
PATJ-201ENST00000307297 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
PATJ-201ENST00000307297 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
PATJ-201ENST00000307297 ADGBQ8N7X0 1667 aa16.86■□□□□ 0.29
PATJ-201ENST00000307297 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
PATJ-201ENST00000307297 AFAP1Q8N556 730 aa16.85■□□□□ 0.29
PATJ-201ENST00000307297 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
PATJ-201ENST00000307297 MAST1Q9Y2H9 1570 aa16.84■□□□□ 0.29
PATJ-201ENST00000307297 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
PATJ-201ENST00000307297 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
PATJ-201ENST00000307297 MAGI2Q86UL8 1455 aa16.84■□□□□ 0.29
PATJ-201ENST00000307297 ZFYVE16Q7Z3T8 1539 aa16.83■□□□□ 0.29
PATJ-201ENST00000307297 ABCC5O15440 1437 aa16.83■□□□□ 0.28
PATJ-201ENST00000307297 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
PATJ-201ENST00000307297 KIDINS220Q9ULH0 1771 aa16.82■□□□□ 0.28
PATJ-201ENST00000307297 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
PATJ-201ENST00000307297 ITGAEP38570 1179 aa16.81■□□□□ 0.28
PATJ-201ENST00000307297 ARHGEF40Q8TER5 1519 aa16.81■□□□□ 0.28
PATJ-201ENST00000307297 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
PATJ-201ENST00000307297 PLXNC1O60486 1568 aa16.8■□□□□ 0.28
PATJ-201ENST00000307297 ABCA6Q8N139 1617 aa16.79■□□□□ 0.28
PATJ-201ENST00000307297 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.28
PATJ-201ENST00000307297 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
PATJ-201ENST00000307297 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.27
PATJ-201ENST00000307297 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
PATJ-201ENST00000307297 YEATS2Q9ULM3 1422 aa16.75■□□□□ 0.27
PATJ-201ENST00000307297 TRIM26Q12899 539 aaPredicted RBP16.74■□□□□ 0.27
PATJ-201ENST00000307297 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
PATJ-201ENST00000307297 PTPRKQ15262 1439 aa16.73■□□□□ 0.27
PATJ-201ENST00000307297 ATP10AO60312 1499 aa16.73■□□□□ 0.27
PATJ-201ENST00000307297 REREQ9P2R6 1566 aa16.72■□□□□ 0.27
PATJ-201ENST00000307297 DUOX2Q9NRD8 1548 aa16.72■□□□□ 0.27
PATJ-201ENST00000307297 KIF15Q9NS87 1388 aa16.72■□□□□ 0.27
PATJ-201ENST00000307297 GCC2Q8IWJ2 1684 aa16.71■□□□□ 0.27
PATJ-201ENST00000307297 NCOA1Q15788 1441 aa16.71■□□□□ 0.27
PATJ-201ENST00000307297 A2MP01023 1474 aa16.7■□□□□ 0.26
PATJ-201ENST00000307297 RRP7BPQ9NSQ0 103 aa16.69■□□□□ 0.26
PATJ-201ENST00000307297 EIF2AK4Q9P2K8 1649 aaKnown RBP16.68■□□□□ 0.26
PATJ-201ENST00000307297 ERBINQ96RT1 1412 aa16.67■□□□□ 0.26
PATJ-201ENST00000307297 DHX29Q7Z478 1369 aaKnown RBP16.66■□□□□ 0.26
PATJ-201ENST00000307297 HFM1A2PYH4 1435 aa16.65■□□□□ 0.26
PATJ-201ENST00000307297 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
PATJ-201ENST00000307297 BCORL1Q5H9F3 1711 aa16.64■□□□□ 0.25
PATJ-201ENST00000307297 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
PATJ-201ENST00000307297 AGLP35573 1532 aa16.64■□□□□ 0.25
PATJ-201ENST00000307297 SIGLEC1Q9BZZ2 1709 aa16.63■□□□□ 0.25
PATJ-201ENST00000307297 NAIPQ13075 1403 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms