RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 ANP32CO43423 234 aa21.23■□□□□ 0.99
PPP4R4-201ENST00000304338 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.98
PPP4R4-201ENST00000304338 MAPKBP1O60336 1514 aa21.2■□□□□ 0.98
PPP4R4-201ENST00000304338 TROQ12816 1431 aaPredicted RBP21.19■□□□□ 0.98
PPP4R4-201ENST00000304338 KDM2AQ9Y2K7 1162 aa21.19■□□□□ 0.98
PPP4R4-201ENST00000304338 KIAA0556O60303 1618 aa21.19■□□□□ 0.98
PPP4R4-201ENST00000304338 L3MBTL2Q969R5 705 aa21.18■□□□□ 0.98
PPP4R4-201ENST00000304338 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
PPP4R4-201ENST00000304338 PKD2Q13563 968 aa21.17■□□□□ 0.98
PPP4R4-201ENST00000304338 CEP170Q5SW79 1584 aa21.15■□□□□ 0.98
PPP4R4-201ENST00000304338 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.97
PPP4R4-201ENST00000304338 ANKRD30AQ9BXX3 1397 aa21.12■□□□□ 0.97
PPP4R4-201ENST00000304338 NUP160Q12769 1436 aa21.11■□□□□ 0.97
PPP4R4-201ENST00000304338 DAPK1P53355 1430 aa21.11■□□□□ 0.97
PPP4R4-201ENST00000304338 RAPGEF6Q8TEU7 1601 aa21.1■□□□□ 0.97
PPP4R4-201ENST00000304338 NUP155O75694 1391 aa21.09■□□□□ 0.97
PPP4R4-201ENST00000304338 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
PPP4R4-201ENST00000304338 ABCC5O15440 1437 aa21.08■□□□□ 0.97
PPP4R4-201ENST00000304338 HSPA5P11021 654 aaKnown RBP21.08■□□□□ 0.96
PPP4R4-201ENST00000304338 NPM1P06748 294 aaKnown RBP eCLIP21.07■□□□□ 0.96
PPP4R4-201ENST00000304338 ARHGEF11O15085 1522 aa21.05■□□□□ 0.96
PPP4R4-201ENST00000304338 ATP10BO94823 1461 aa21.04■□□□□ 0.96
PPP4R4-201ENST00000304338 LRRIQ1Q96JM4 1722 aa21.02■□□□□ 0.96
PPP4R4-201ENST00000304338 GPATCH8Q9UKJ3 1502 aaKnown RBP21.01■□□□□ 0.95
PPP4R4-201ENST00000304338 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
PPP4R4-201ENST00000304338 EFCAB2Q5VUJ9 269 aa20.98■□□□□ 0.95
PPP4R4-201ENST00000304338 TCOF1Q13428 1488 aaKnown RBP20.97■□□□□ 0.95
PPP4R4-201ENST00000304338 ANKRD50Q9ULJ7 1429 aa20.97■□□□□ 0.95
PPP4R4-201ENST00000304338 DCAF11Q8TEB1 546 aa20.96■□□□□ 0.95
PPP4R4-201ENST00000304338 KIF15Q9NS87 1388 aa20.95■□□□□ 0.94
PPP4R4-201ENST00000304338 ROCK1Q13464 1354 aa20.93■□□□□ 0.94
PPP4R4-201ENST00000304338 NCOA1Q15788 1441 aa20.92■□□□□ 0.94
PPP4R4-201ENST00000304338 AKNAQ7Z591 1439 aa20.92■□□□□ 0.94
PPP4R4-201ENST00000304338 C9orf84Q5VXU9 1444 aa20.91■□□□□ 0.94
PPP4R4-201ENST00000304338 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
PPP4R4-201ENST00000304338 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
PPP4R4-201ENST00000304338 OSCARQ8IYS5 282 aa20.89■□□□□ 0.94
PPP4R4-201ENST00000304338 BCANQ96GW7 911 aa20.89■□□□□ 0.94
PPP4R4-201ENST00000304338 KIF14Q15058 1648 aa20.89■□□□□ 0.93
PPP4R4-201ENST00000304338 RSPH4AQ5TD94 716 aa20.88■□□□□ 0.93
PPP4R4-201ENST00000304338 AFAP1Q8N556 730 aa20.87■□□□□ 0.93
PPP4R4-201ENST00000304338 NEFLP07196 543 aa20.86■□□□□ 0.93
PPP4R4-201ENST00000304338 ARHGAP5Q13017 1502 aa20.86■□□□□ 0.93
PPP4R4-201ENST00000304338 FAM9BQ8IZU0 186 aa20.86■□□□□ 0.93
PPP4R4-201ENST00000304338 HNRNPUQ00839 825 aaKnown RBP eCLIP20.85■□□□□ 0.93
PPP4R4-201ENST00000304338 KDM6BO15054 1643 aa20.85■□□□□ 0.93
PPP4R4-201ENST00000304338 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
PPP4R4-201ENST00000304338 SPAG9O60271 1321 aaKnown RBP20.83■□□□□ 0.92
PPP4R4-201ENST00000304338 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
PPP4R4-201ENST00000304338 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
PPP4R4-201ENST00000304338 WASHC2AQ641Q2 1341 aa20.8■□□□□ 0.92
PPP4R4-201ENST00000304338 MRS2Q9HD23 443 aa20.79■□□□□ 0.92
PPP4R4-201ENST00000304338 ERCC6L2Q5T890 1561 aa20.77■□□□□ 0.92
PPP4R4-201ENST00000304338 ABCA8O94911 1581 aa20.77■□□□□ 0.91
PPP4R4-201ENST00000304338 KIF3BO15066 747 aa20.76■□□□□ 0.91
PPP4R4-201ENST00000304338 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
PPP4R4-201ENST00000304338 KIAA1107Q9UPP5 1409 aa20.76■□□□□ 0.91
PPP4R4-201ENST00000304338 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
PPP4R4-201ENST00000304338 CHD1O14646 1710 aa20.76■□□□□ 0.91
PPP4R4-201ENST00000304338 DNMT1P26358 1616 aaKnown RBP20.75■□□□□ 0.91
PPP4R4-201ENST00000304338 C11orf95C9JLR9 678 aaPredicted RBP20.74■□□□□ 0.91
PPP4R4-201ENST00000304338 CYB5RLQ6IPT4 315 aa20.72■□□□□ 0.91
PPP4R4-201ENST00000304338 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
PPP4R4-201ENST00000304338 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
PPP4R4-201ENST00000304338 FKBP8Q14318 412 aa20.71■□□□□ 0.91
PPP4R4-201ENST00000304338 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
PPP4R4-201ENST00000304338 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
PPP4R4-201ENST00000304338 GGT6Q6P531 493 aa20.69■□□□□ 0.9
PPP4R4-201ENST00000304338 ABCC10Q5T3U5 1492 aa20.69■□□□□ 0.9
PPP4R4-201ENST00000304338 RPRD2Q5VT52 1461 aaKnown RBP20.68■□□□□ 0.9
PPP4R4-201ENST00000304338 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
PPP4R4-201ENST00000304338 USP47Q96K76 1375 aa20.67■□□□□ 0.9
PPP4R4-201ENST00000304338 ROCK2O75116 1388 aaKnown RBP20.66■□□□□ 0.9
PPP4R4-201ENST00000304338 KIF7Q2M1P5 1343 aa20.66■□□□□ 0.9
PPP4R4-201ENST00000304338 DENND4BO75064 1496 aaPredicted RBP20.65■□□□□ 0.9
PPP4R4-201ENST00000304338 PZPP20742 1482 aa20.65■□□□□ 0.9
PPP4R4-201ENST00000304338 SYCP2Q9BX26 1530 aa20.64■□□□□ 0.9
PPP4R4-201ENST00000304338 GCC2Q8IWJ2 1684 aa20.64■□□□□ 0.89
PPP4R4-201ENST00000304338 CCDC7Q96M83 1385 aa20.63■□□□□ 0.89
PPP4R4-201ENST00000304338 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
PPP4R4-201ENST00000304338 PLEKHH2Q8IVE3 1493 aa20.61■□□□□ 0.89
PPP4R4-201ENST00000304338 TMC1Q8TDI8 760 aa20.61■□□□□ 0.89
PPP4R4-201ENST00000304338 IRX6P78412 446 aaPredicted RBP20.6■□□□□ 0.89
PPP4R4-201ENST00000304338 NBPF1Q3BBV0 1214 aa20.6■□□□□ 0.89
PPP4R4-201ENST00000304338 SCAPERQ9BY12 1400 aa20.6■□□□□ 0.89
PPP4R4-201ENST00000304338 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
PPP4R4-201ENST00000304338 PRKRIP1Q9H875 184 aaPredicted RBP20.58■□□□□ 0.89
PPP4R4-201ENST00000304338 MBD5Q9P267 1494 aa20.57■□□□□ 0.88
PPP4R4-201ENST00000304338 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
PPP4R4-201ENST00000304338 KANK1Q14678 1352 aa20.57■□□□□ 0.88
PPP4R4-201ENST00000304338 PLCH2O75038 1416 aa20.57■□□□□ 0.88
PPP4R4-201ENST00000304338 CCDC184Q52MB2 194 aa20.57■□□□□ 0.88
PPP4R4-201ENST00000304338 ADGRL2O95490 1459 aa20.57■□□□□ 0.88
PPP4R4-201ENST00000304338 TRAPPC8Q9Y2L5 1435 aa20.56■□□□□ 0.88
PPP4R4-201ENST00000304338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88
PPP4R4-201ENST00000304338 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
PPP4R4-201ENST00000304338 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
PPP4R4-201ENST00000304338 RAPGEF3O95398 923 aa20.51■□□□□ 0.87
PPP4R4-201ENST00000304338 SHANK2Q9UPX8 1470 aa20.5■□□□□ 0.87
PPP4R4-201ENST00000304338 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms