RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 SUPT16HQ9Y5B9 1047 aaKnown RBP8.57□□□□□ -1.04
SCAPER-201ENST00000303521 IGF1RP08069 1367 aa8.57□□□□□ -1.04
SCAPER-201ENST00000303521 ANKRD30AQ9BXX3 1397 aa8.57□□□□□ -1.04
SCAPER-201ENST00000303521 CHIC2Q9UKJ5 165 aa8.56□□□□□ -1.04
SCAPER-201ENST00000303521 CUL7Q14999 1698 aa8.54□□□□□ -1.04
SCAPER-201ENST00000303521 LRRIQ1Q96JM4 1722 aa8.54□□□□□ -1.04
SCAPER-201ENST00000303521 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
SCAPER-201ENST00000303521 SENP3Q9H4L4 574 aaPredicted RBP8.53□□□□□ -1.04
SCAPER-201ENST00000303521 ZNF608Q9ULD9 1512 aaPredicted RBP8.52□□□□□ -1.05
SCAPER-201ENST00000303521 DENND4BO75064 1496 aaPredicted RBP8.52□□□□□ -1.05
SCAPER-201ENST00000303521 ZBTB47Q9UFB7 747 aaPredicted RBP8.52□□□□□ -1.05
SCAPER-201ENST00000303521 KIF21AQ7Z4S6 1674 aa8.52□□□□□ -1.05
SCAPER-201ENST00000303521 TOP2BQ02880 1626 aa8.51□□□□□ -1.05
SCAPER-201ENST00000303521 FANCAO15360 1455 aa8.51□□□□□ -1.05
SCAPER-201ENST00000303521 ZBTB7CA1YPR0 619 aa8.51□□□□□ -1.05
SCAPER-201ENST00000303521 ARAP1Q96P48 1450 aa8.5□□□□□ -1.05
SCAPER-201ENST00000303521 IQGAP2Q13576 1575 aa8.49□□□□□ -1.05
SCAPER-201ENST00000303521 ARHGAP5Q13017 1502 aa8.49□□□□□ -1.05
SCAPER-201ENST00000303521 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
SCAPER-201ENST00000303521 EIF5BO60841 1220 aaKnown RBP8.49□□□□□ -1.05
SCAPER-201ENST00000303521 PRDM2Q13029 1718 aa8.49□□□□□ -1.05
SCAPER-201ENST00000303521 ARHGEF11O15085 1522 aa8.48□□□□□ -1.05
SCAPER-201ENST00000303521 CUX1P39880 1505 aa8.48□□□□□ -1.05
SCAPER-201ENST00000303521 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
SCAPER-201ENST00000303521 DDX10Q13206 875 aaKnown RBP8.47□□□□□ -1.05
SCAPER-201ENST00000303521 EIF4G3O43432 1585 aaKnown RBP8.47□□□□□ -1.05
SCAPER-201ENST00000303521 ARHGAP35Q9NRY4 1499 aa8.47□□□□□ -1.05
SCAPER-201ENST00000303521 TONSLQ96HA7 1378 aa8.47□□□□□ -1.05
SCAPER-201ENST00000303521 UBAP1LF5GYI3 381 aa8.47□□□□□ -1.05
SCAPER-201ENST00000303521 NBR1Q14596 966 aa8.47□□□□□ -1.05
SCAPER-201ENST00000303521 EFCAB5A4FU69 1503 aa8.47□□□□□ -1.05
SCAPER-201ENST00000303521 RRP7BPQ9NSQ0 103 aa8.47□□□□□ -1.05
SCAPER-201ENST00000303521 FHOD3Q2V2M9 1422 aa8.47□□□□□ -1.05
SCAPER-201ENST00000303521 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCAPER-201ENST00000303521 CNTLNQ9NXG0 1405 aa8.46□□□□□ -1.06
SCAPER-201ENST00000303521 VGFO15240 615 aaPredicted RBP8.46□□□□□ -1.06
SCAPER-201ENST00000303521 HNRNPMP52272 730 aaKnown RBP eCLIP8.46□□□□□ -1.06
SCAPER-201ENST00000303521 PKD2Q13563 968 aa8.46□□□□□ -1.06
SCAPER-201ENST00000303521 ASXL2Q76L83 1435 aa8.46□□□□□ -1.06
SCAPER-201ENST00000303521 MAPKBP1O60336 1514 aa8.46□□□□□ -1.06
SCAPER-201ENST00000303521 SCAPERQ9BY12 1400 aa8.45□□□□□ -1.06
SCAPER-201ENST00000303521 PIP4K2BP78356 416 aa8.45□□□□□ -1.06
SCAPER-201ENST00000303521 PRXQ9BXM0 1461 aa8.45□□□□□ -1.06
SCAPER-201ENST00000303521 PSME1Q06323 249 aa8.45□□□□□ -1.06
SCAPER-201ENST00000303521 TSHZ2Q9NRE2 1034 aa8.44□□□□□ -1.06
SCAPER-201ENST00000303521 KDM5BQ9UGL1 1544 aa8.44□□□□□ -1.06
SCAPER-201ENST00000303521 NPHP1O15259 732 aa8.44□□□□□ -1.06
SCAPER-201ENST00000303521 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
SCAPER-201ENST00000303521 THOC2Q8NI27 1593 aaKnown RBP8.44□□□□□ -1.06
SCAPER-201ENST00000303521 TMX4Q9H1E5 349 aaPredicted RBP8.43□□□□□ -1.06
SCAPER-201ENST00000303521 CCDC136Q96JN2 1154 aa8.43□□□□□ -1.06
SCAPER-201ENST00000303521 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
SCAPER-201ENST00000303521 TXNDC2Q86VQ3 553 aa8.43□□□□□ -1.06
SCAPER-201ENST00000303521 WDR7Q9Y4E6 1490 aa8.42□□□□□ -1.06
SCAPER-201ENST00000303521 UHRF1BP1Q6BDS2 1440 aa8.42□□□□□ -1.06
SCAPER-201ENST00000303521 NOP58Q9Y2X3 529 aaKnown RBP8.42□□□□□ -1.06
SCAPER-201ENST00000303521 RBM19Q9Y4C8 960 aaKnown RBP8.42□□□□□ -1.06
SCAPER-201ENST00000303521 ERICH6BQ5W0A0 696 aa8.41□□□□□ -1.06
SCAPER-201ENST00000303521 PPP4R2Q9NY27 417 aa8.41□□□□□ -1.06
SCAPER-201ENST00000303521 EVA1CP58658 441 aa8.41□□□□□ -1.06
SCAPER-201ENST00000303521 ABCC2Q92887 1545 aa8.41□□□□□ -1.06
SCAPER-201ENST00000303521 PPM1GO15355 546 aaPredicted RBP8.4□□□□□ -1.06
SCAPER-201ENST00000303521 SLC52A1Q9NWF4 448 aa8.4□□□□□ -1.06
SCAPER-201ENST00000303521 ADGRL1O94910 1474 aa8.4□□□□□ -1.06
SCAPER-201ENST00000303521 WASHC2AQ641Q2 1341 aa8.4□□□□□ -1.06
SCAPER-201ENST00000303521 NUP160Q12769 1436 aa8.4□□□□□ -1.06
SCAPER-201ENST00000303521 PLEKHG5O94827 1062 aa8.4□□□□□ -1.06
SCAPER-201ENST00000303521 RAPGEF3O95398 923 aa8.4□□□□□ -1.06
SCAPER-201ENST00000303521 CNGB1Q14028 1251 aaPredicted RBP8.4□□□□□ -1.06
SCAPER-201ENST00000303521 STAC3Q96MF2 364 aa8.4□□□□□ -1.07
SCAPER-201ENST00000303521 CCER2I3L3R5 266 aa8.4□□□□□ -1.07
SCAPER-201ENST00000303521 HECW1Q76N89 1606 aa8.39□□□□□ -1.07
SCAPER-201ENST00000303521 DEKP35659 375 aaKnown RBP8.39□□□□□ -1.07
SCAPER-201ENST00000303521 TROQ12816 1431 aaPredicted RBP8.39□□□□□ -1.07
SCAPER-201ENST00000303521 NGDNQ8NEJ9 315 aaKnown RBP8.39□□□□□ -1.07
SCAPER-201ENST00000303521 EIF3AQ14152 1382 aaKnown RBP8.38□□□□□ -1.07
SCAPER-201ENST00000303521 MYOM3Q5VTT5 1437 aa8.38□□□□□ -1.07
SCAPER-201ENST00000303521 PAK3O75914 559 aaPredicted RBP8.38□□□□□ -1.07
SCAPER-201ENST00000303521 HDGFL2Q7Z4V5 671 aaPredicted RBP8.38□□□□□ -1.07
SCAPER-201ENST00000303521 ADAMTS12P58397 1594 aa8.37□□□□□ -1.07
SCAPER-201ENST00000303521 VPS8Q8N3P4 1428 aa8.37□□□□□ -1.07
SCAPER-201ENST00000303521 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
SCAPER-201ENST00000303521 RGL3Q3MIN7 710 aa8.36□□□□□ -1.07
SCAPER-201ENST00000303521 KDM2AQ9Y2K7 1162 aa8.36□□□□□ -1.07
SCAPER-201ENST00000303521 ANP32BQ92688 251 aaKnown RBP8.36□□□□□ -1.07
SCAPER-201ENST00000303521 LRPPRCP42704 1394 aaKnown RBP8.36□□□□□ -1.07
SCAPER-201ENST00000303521 LMTK3Q96Q04 1460 aa8.36□□□□□ -1.07
SCAPER-201ENST00000303521 NUP155O75694 1391 aa8.36□□□□□ -1.07
SCAPER-201ENST00000303521 DHX57Q6P158 1386 aaKnown RBP8.36□□□□□ -1.07
SCAPER-201ENST00000303521 FAM135AQ9P2D6 1515 aa8.35□□□□□ -1.07
SCAPER-201ENST00000303521 FAM9BQ8IZU0 186 aa8.35□□□□□ -1.07
SCAPER-201ENST00000303521 TIMELESSQ9UNS1 1208 aa8.35□□□□□ -1.07
SCAPER-201ENST00000303521 NEO1Q92859 1461 aa8.34□□□□□ -1.07
SCAPER-201ENST00000303521 TMC1Q8TDI8 760 aa8.34□□□□□ -1.07
SCAPER-201ENST00000303521 GPRASP1Q5JY77 1395 aa8.34□□□□□ -1.07
SCAPER-201ENST00000303521 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
SCAPER-201ENST00000303521 MSH6P52701 1360 aa8.34□□□□□ -1.07
SCAPER-201ENST00000303521 UPF2Q9HAU5 1272 aaKnown RBP8.34□□□□□ -1.07
SCAPER-201ENST00000303521 MRS2Q9HD23 443 aa8.34□□□□□ -1.07
SCAPER-201ENST00000303521 CHMP4AQ9BY43 222 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms