RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
CTTN-201ENST00000301843 KDM5BQ9UGL1 1544 aa18.75■□□□□ 0.59
CTTN-201ENST00000301843 KDM6BO15054 1643 aa18.74■□□□□ 0.59
CTTN-201ENST00000301843 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
CTTN-201ENST00000301843 CDK13Q14004 1512 aaKnown RBP18.73■□□□□ 0.59
CTTN-201ENST00000301843 ZNF644Q9H582 1327 aaPredicted RBP18.72■□□□□ 0.59
CTTN-201ENST00000301843 NBPF8Q3BBV2 869 aa18.72■□□□□ 0.59
CTTN-201ENST00000301843 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
CTTN-201ENST00000301843 DENND4BO75064 1496 aaPredicted RBP18.71■□□□□ 0.59
CTTN-201ENST00000301843 GCC2Q8IWJ2 1684 aa18.7■□□□□ 0.58
CTTN-201ENST00000301843 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
CTTN-201ENST00000301843 MIA2Q96PC5 1412 aa18.7■□□□□ 0.58
CTTN-201ENST00000301843 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
CTTN-201ENST00000301843 AKNAQ7Z591 1439 aa18.68■□□□□ 0.58
CTTN-201ENST00000301843 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
CTTN-201ENST00000301843 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
CTTN-201ENST00000301843 DISP1Q96F81 1524 aa18.66■□□□□ 0.58
CTTN-201ENST00000301843 ERICH6Q7L0X2 663 aa18.64■□□□□ 0.57
CTTN-201ENST00000301843 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
CTTN-201ENST00000301843 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.57
CTTN-201ENST00000301843 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
CTTN-201ENST00000301843 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
CTTN-201ENST00000301843 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
CTTN-201ENST00000301843 CNTLNQ9NXG0 1405 aa18.61■□□□□ 0.57
CTTN-201ENST00000301843 NUP153P49790 1475 aaKnown RBP18.6■□□□□ 0.57
CTTN-201ENST00000301843 KIF7Q2M1P5 1343 aa18.59■□□□□ 0.57
CTTN-201ENST00000301843 RAPGEF6Q8TEU7 1601 aa18.59■□□□□ 0.57
CTTN-201ENST00000301843 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
CTTN-201ENST00000301843 DAPK1P53355 1430 aa18.55■□□□□ 0.56
CTTN-201ENST00000301843 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
CTTN-201ENST00000301843 DNMT1P26358 1616 aaKnown RBP18.54■□□□□ 0.56
CTTN-201ENST00000301843 ROCK1Q13464 1354 aa18.54■□□□□ 0.56
CTTN-201ENST00000301843 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
CTTN-201ENST00000301843 ABCC5O15440 1437 aa18.52■□□□□ 0.56
CTTN-201ENST00000301843 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
CTTN-201ENST00000301843 NCOA1Q15788 1441 aa18.51■□□□□ 0.55
CTTN-201ENST00000301843 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
CTTN-201ENST00000301843 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
CTTN-201ENST00000301843 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
CTTN-201ENST00000301843 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
CTTN-201ENST00000301843 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
CTTN-201ENST00000301843 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
CTTN-201ENST00000301843 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
CTTN-201ENST00000301843 NBR1Q14596 966 aa18.47■□□□□ 0.55
CTTN-201ENST00000301843 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
CTTN-201ENST00000301843 PRG4Q92954 1404 aaPredicted RBP18.46■□□□□ 0.55
CTTN-201ENST00000301843 PLB1Q6P1J6 1458 aa18.45■□□□□ 0.54
CTTN-201ENST00000301843 FBLN2P98095 1184 aa18.45■□□□□ 0.54
CTTN-201ENST00000301843 PKD2Q13563 968 aa18.43■□□□□ 0.54
CTTN-201ENST00000301843 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
CTTN-201ENST00000301843 ITSN2Q9NZM3 1697 aa18.42■□□□□ 0.54
CTTN-201ENST00000301843 NUP160Q12769 1436 aa18.42■□□□□ 0.54
CTTN-201ENST00000301843 ADCY10Q96PN6 1610 aa18.42■□□□□ 0.54
CTTN-201ENST00000301843 CFDP1Q9UEE9 299 aaPredicted RBP18.42■□□□□ 0.54
CTTN-201ENST00000301843 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
CTTN-201ENST00000301843 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
CTTN-201ENST00000301843 TEX14Q8IWB6 1497 aa18.41■□□□□ 0.54
CTTN-201ENST00000301843 CARMIL2Q6F5E8 1435 aa18.41■□□□□ 0.54
CTTN-201ENST00000301843 GPATCH8Q9UKJ3 1502 aaKnown RBP18.4■□□□□ 0.54
CTTN-201ENST00000301843 KIF14Q15058 1648 aa18.4■□□□□ 0.54
CTTN-201ENST00000301843 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.53
CTTN-201ENST00000301843 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
CTTN-201ENST00000301843 USP47Q96K76 1375 aa18.38■□□□□ 0.53
CTTN-201ENST00000301843 SPATA31E1Q6ZUB1 1445 aa18.37■□□□□ 0.53
CTTN-201ENST00000301843 ADGBQ8N7X0 1667 aa18.37■□□□□ 0.53
CTTN-201ENST00000301843 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
CTTN-201ENST00000301843 CROCC2H7BZ55 1655 aa18.35■□□□□ 0.53
CTTN-201ENST00000301843 ADGRL2O95490 1459 aa18.34■□□□□ 0.53
CTTN-201ENST00000301843 PZPP20742 1482 aa18.34■□□□□ 0.53
CTTN-201ENST00000301843 DHX29Q7Z478 1369 aaKnown RBP18.34■□□□□ 0.53
CTTN-201ENST00000301843 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
CTTN-201ENST00000301843 ABCA8O94911 1581 aa18.33■□□□□ 0.52
CTTN-201ENST00000301843 NUDCQ9Y266 331 aa18.33■□□□□ 0.52
CTTN-201ENST00000301843 NPM2Q86SE8 214 aaKnown RBP18.32■□□□□ 0.52
CTTN-201ENST00000301843 ST20-MTHFSA0A0A6YYL1 179 aa18.31■□□□□ 0.52
CTTN-201ENST00000301843 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
CTTN-201ENST00000301843 BCORL1Q5H9F3 1711 aa18.31■□□□□ 0.52
CTTN-201ENST00000301843 DCAF11Q8TEB1 546 aa18.29■□□□□ 0.52
CTTN-201ENST00000301843 DEKP35659 375 aaKnown RBP18.29■□□□□ 0.52
CTTN-201ENST00000301843 NOP58Q9Y2X3 529 aaKnown RBP18.29■□□□□ 0.52
CTTN-201ENST00000301843 RGL3Q3MIN7 710 aa18.28■□□□□ 0.52
CTTN-201ENST00000301843 CDC42BPAQ5VT25 1732 aa18.28■□□□□ 0.52
CTTN-201ENST00000301843 ATP10BO94823 1461 aa18.28■□□□□ 0.52
CTTN-201ENST00000301843 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
CTTN-201ENST00000301843 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
CTTN-201ENST00000301843 ABCC10Q5T3U5 1492 aa18.28■□□□□ 0.52
CTTN-201ENST00000301843 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.52
CTTN-201ENST00000301843 SKAP1Q86WV1 359 aa18.27■□□□□ 0.52
CTTN-201ENST00000301843 NUP155O75694 1391 aa18.26■□□□□ 0.51
CTTN-201ENST00000301843 KIAA1107Q9UPP5 1409 aa18.26■□□□□ 0.51
CTTN-201ENST00000301843 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
CTTN-201ENST00000301843 HNRNPMP52272 730 aaKnown RBP eCLIP18.24■□□□□ 0.515e-8■■■■■ 27.1
CTTN-201ENST00000301843 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
CTTN-201ENST00000301843 SHANK2Q9UPX8 1470 aa18.23■□□□□ 0.51
CTTN-201ENST00000301843 ANKRD50Q9ULJ7 1429 aa18.23■□□□□ 0.51
CTTN-201ENST00000301843 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
CTTN-201ENST00000301843 POLR1AO95602 1720 aaPredicted RBP18.22■□□□□ 0.51
CTTN-201ENST00000301843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■■■□□ 15.3
CTTN-201ENST00000301843 PLIN1O60240 522 aa18.2■□□□□ 0.5
CTTN-201ENST00000301843 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms