RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 DISP1Q96F81 1524 aa22.71■■□□□ 1.23
OTUB1-201ENST00000301453 CCDC184Q52MB2 194 aa22.7■■□□□ 1.22
OTUB1-201ENST00000301453 NBPF8Q3BBV2 869 aa22.7■■□□□ 1.22
OTUB1-201ENST00000301453 ANP32EQ9BTT0 268 aa22.7■■□□□ 1.22
OTUB1-201ENST00000301453 ROCK1Q13464 1354 aa22.69■■□□□ 1.22
OTUB1-201ENST00000301453 NUP153P49790 1475 aaKnown RBP22.68■■□□□ 1.22
OTUB1-201ENST00000301453 CNTLNQ9NXG0 1405 aa22.68■■□□□ 1.22
OTUB1-201ENST00000301453 KIAA0556O60303 1618 aa22.67■■□□□ 1.22
OTUB1-201ENST00000301453 DNMT1P26358 1616 aaKnown RBP22.67■■□□□ 1.22
OTUB1-201ENST00000301453 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
OTUB1-201ENST00000301453 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
OTUB1-201ENST00000301453 KIAA0586Q9BVV6 1533 aa22.65■■□□□ 1.22
OTUB1-201ENST00000301453 TEX14Q8IWB6 1497 aa22.65■■□□□ 1.22
OTUB1-201ENST00000301453 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
OTUB1-201ENST00000301453 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
OTUB1-201ENST00000301453 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
OTUB1-201ENST00000301453 PRKRIP1Q9H875 184 aaPredicted RBP22.6■■□□□ 1.21
OTUB1-201ENST00000301453 RAPGEF6Q8TEU7 1601 aa22.6■■□□□ 1.21
OTUB1-201ENST00000301453 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
OTUB1-201ENST00000301453 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
OTUB1-201ENST00000301453 SPATA31E1Q6ZUB1 1445 aa22.59■■□□□ 1.21
OTUB1-201ENST00000301453 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
OTUB1-201ENST00000301453 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
OTUB1-201ENST00000301453 PZPP20742 1482 aa22.55■■□□□ 1.2
OTUB1-201ENST00000301453 KIF7Q2M1P5 1343 aa22.55■■□□□ 1.2
OTUB1-201ENST00000301453 CDK11AQ9UQ88 783 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-201ENST00000301453 CAMSAP2Q08AD1 1489 aa22.51■■□□□ 1.19
OTUB1-201ENST00000301453 TROQ12816 1431 aaPredicted RBP22.51■■□□□ 1.19
OTUB1-201ENST00000301453 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
OTUB1-201ENST00000301453 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
OTUB1-201ENST00000301453 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
OTUB1-201ENST00000301453 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
OTUB1-201ENST00000301453 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
OTUB1-201ENST00000301453 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
OTUB1-201ENST00000301453 KIF14Q15058 1648 aa22.46■■□□□ 1.19
OTUB1-201ENST00000301453 POLR1AO95602 1720 aaPredicted RBP22.46■■□□□ 1.19
OTUB1-201ENST00000301453 MBD5Q9P267 1494 aa22.44■■□□□ 1.18
OTUB1-201ENST00000301453 ZNF777Q9ULD5 760 aaPredicted RBP22.44■■□□□ 1.18
OTUB1-201ENST00000301453 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
OTUB1-201ENST00000301453 ADGBQ8N7X0 1667 aa22.42■■□□□ 1.18
OTUB1-201ENST00000301453 ADGRL2O95490 1459 aa22.42■■□□□ 1.18
OTUB1-201ENST00000301453 KIAA1107Q9UPP5 1409 aa22.41■■□□□ 1.18
OTUB1-201ENST00000301453 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
OTUB1-201ENST00000301453 ITSN2Q9NZM3 1697 aa22.41■■□□□ 1.18
OTUB1-201ENST00000301453 PKD2Q13563 968 aa22.39■■□□□ 1.18
OTUB1-201ENST00000301453 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.18
OTUB1-201ENST00000301453 DHX29Q7Z478 1369 aaKnown RBP22.39■■□□□ 1.17
OTUB1-201ENST00000301453 BCORL1Q5H9F3 1711 aa22.39■■□□□ 1.17
OTUB1-201ENST00000301453 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.17
OTUB1-201ENST00000301453 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
OTUB1-201ENST00000301453 MSH5O43196 834 aa22.37■■□□□ 1.17
OTUB1-201ENST00000301453 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
OTUB1-201ENST00000301453 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
OTUB1-201ENST00000301453 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
OTUB1-201ENST00000301453 USP47Q96K76 1375 aa22.36■■□□□ 1.17
OTUB1-201ENST00000301453 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
OTUB1-201ENST00000301453 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
OTUB1-201ENST00000301453 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
OTUB1-201ENST00000301453 FBLN2P98095 1184 aa22.34■■□□□ 1.17
OTUB1-201ENST00000301453 JPH4Q96JJ6 628 aa22.33■■□□□ 1.17
OTUB1-201ENST00000301453 ANKRD50Q9ULJ7 1429 aa22.33■■□□□ 1.17
OTUB1-201ENST00000301453 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
OTUB1-201ENST00000301453 KDM5CP41229 1560 aa22.31■■□□□ 1.16
OTUB1-201ENST00000301453 POLR3GLQ9BT43 218 aa22.29■■□□□ 1.16
OTUB1-201ENST00000301453 NUP160Q12769 1436 aa22.29■■□□□ 1.16
OTUB1-201ENST00000301453 CARMIL2Q6F5E8 1435 aa22.29■■□□□ 1.16
OTUB1-201ENST00000301453 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
OTUB1-201ENST00000301453 CDC42BPAQ5VT25 1732 aa22.28■■□□□ 1.16
OTUB1-201ENST00000301453 B4GALNT3Q6L9W6 998 aa22.27■■□□□ 1.16
OTUB1-201ENST00000301453 NUP155O75694 1391 aa22.26■■□□□ 1.15
OTUB1-201ENST00000301453 UHRF1BP1Q6BDS2 1440 aa22.26■■□□□ 1.15
OTUB1-201ENST00000301453 FANCIQ9NVI1 1328 aa22.25■■□□□ 1.15
OTUB1-201ENST00000301453 ATP10BO94823 1461 aa22.25■■□□□ 1.15
OTUB1-201ENST00000301453 PLEKHD1A6NEE1 506 aa22.25■■□□□ 1.15
OTUB1-201ENST00000301453 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
OTUB1-201ENST00000301453 ABCA8O94911 1581 aa22.24■■□□□ 1.15
OTUB1-201ENST00000301453 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
OTUB1-201ENST00000301453 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
OTUB1-201ENST00000301453 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
OTUB1-201ENST00000301453 ARID4BQ4LE39 1312 aaPredicted RBP22.22■■□□□ 1.15
OTUB1-201ENST00000301453 SMG6Q86US8 1419 aaKnown RBP22.21■■□□□ 1.15
OTUB1-201ENST00000301453 CARD11Q9BXL7 1154 aa22.19■■□□□ 1.14
OTUB1-201ENST00000301453 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
OTUB1-201ENST00000301453 HNRNPMP52272 730 aaKnown RBP eCLIP22.18■■□□□ 1.14
OTUB1-201ENST00000301453 KDM5DQ9BY66 1539 aa22.18■■□□□ 1.14
OTUB1-201ENST00000301453 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
OTUB1-201ENST00000301453 BCL11AQ9H165 835 aa22.17■■□□□ 1.14
OTUB1-201ENST00000301453 KDM2AQ9Y2K7 1162 aa22.17■■□□□ 1.14
OTUB1-201ENST00000301453 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
OTUB1-201ENST00000301453 TSPY4P0CV99 314 aa22.16■■□□□ 1.14
OTUB1-201ENST00000301453 TSPY10P0CW01 314 aa22.16■■□□□ 1.14
OTUB1-201ENST00000301453 PTPRGP23470 1445 aa22.15■■□□□ 1.14
OTUB1-201ENST00000301453 ST20-MTHFSA0A0A6YYL1 179 aa22.15■■□□□ 1.14
OTUB1-201ENST00000301453 KIF15Q9NS87 1388 aa22.15■■□□□ 1.14
OTUB1-201ENST00000301453 NUDCQ9Y266 331 aa22.15■■□□□ 1.14
OTUB1-201ENST00000301453 RNF123Q5XPI4 1314 aa22.13■■□□□ 1.13
OTUB1-201ENST00000301453 ROCK2O75116 1388 aaKnown RBP22.13■■□□□ 1.13
OTUB1-201ENST00000301453 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
OTUB1-201ENST00000301453 ARHGEF5Q12774 1597 aa22.09■■□□□ 1.13
OTUB1-201ENST00000301453 TMC1Q8TDI8 760 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms