RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 DCAF11Q8TEB1 546 aa19.32■□□□□ 0.68
CDT1-201ENST00000301019 EXOC6Q8TAG9 804 aa19.32■□□□□ 0.68
CDT1-201ENST00000301019 ADAMTS12P58397 1594 aa19.29■□□□□ 0.68
CDT1-201ENST00000301019 PRKRIP1Q9H875 184 aaPredicted RBP19.28■□□□□ 0.68
CDT1-201ENST00000301019 WASHC2CQ9Y4E1 1318 aa19.28■□□□□ 0.68
CDT1-201ENST00000301019 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
CDT1-201ENST00000301019 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
CDT1-201ENST00000301019 FRAT2O75474 233 aaPredicted RBP19.27■□□□□ 0.68
CDT1-201ENST00000301019 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
CDT1-201ENST00000301019 NAP1L5Q96NT1 182 aaPredicted RBP19.25■□□□□ 0.67
CDT1-201ENST00000301019 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
CDT1-201ENST00000301019 ARHGAP35Q9NRY4 1499 aa19.24■□□□□ 0.67
CDT1-201ENST00000301019 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
CDT1-201ENST00000301019 FOXD1Q16676 465 aa19.24■□□□□ 0.67
CDT1-201ENST00000301019 PLIN1O60240 522 aa19.23■□□□□ 0.67
CDT1-201ENST00000301019 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
CDT1-201ENST00000301019 USP35Q9P2H5 1018 aa19.21■□□□□ 0.67
CDT1-201ENST00000301019 CTTNBP2Q8WZ74 1663 aa19.2■□□□□ 0.66
CDT1-201ENST00000301019 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
CDT1-201ENST00000301019 A0A0U1RQG5 324 aaPredicted RBP19.2■□□□□ 0.66
CDT1-201ENST00000301019 PODXL2Q9NZ53 605 aa19.2■□□□□ 0.66
CDT1-201ENST00000301019 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
CDT1-201ENST00000301019 CHIC2Q9UKJ5 165 aa19.18■□□□□ 0.66
CDT1-201ENST00000301019 NUDCQ9Y266 331 aa19.18■□□□□ 0.66
CDT1-201ENST00000301019 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.66
CDT1-201ENST00000301019 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
CDT1-201ENST00000301019 BACH2Q9BYV9 841 aa19.16■□□□□ 0.66
CDT1-201ENST00000301019 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
CDT1-201ENST00000301019 SYNJ2O15056 1496 aa19.15■□□□□ 0.66
CDT1-201ENST00000301019 GLIPR1L2Q4G1C9 344 aa19.15■□□□□ 0.66
CDT1-201ENST00000301019 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
CDT1-201ENST00000301019 FBLN2P98095 1184 aa19.15■□□□□ 0.66
CDT1-201ENST00000301019 RRAGDQ9NQL2 400 aaPredicted RBP19.15■□□□□ 0.66
CDT1-201ENST00000301019 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
CDT1-201ENST00000301019 POGKQ9P215 609 aa19.11■□□□□ 0.65
CDT1-201ENST00000301019 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
CDT1-201ENST00000301019 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
CDT1-201ENST00000301019 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.65
CDT1-201ENST00000301019 RGS3P49796 1198 aa19.08■□□□□ 0.65
CDT1-201ENST00000301019 HSP90AA2PQ14568 343 aaPredicted RBP19.08■□□□□ 0.65
CDT1-201ENST00000301019 IQGAP2Q13576 1575 aa19.08■□□□□ 0.64
CDT1-201ENST00000301019 TCERG1O14776 1098 aaKnown RBP19.08■□□□□ 0.64
CDT1-201ENST00000301019 ARID3AQ99856 593 aa19.08■□□□□ 0.64
CDT1-201ENST00000301019 SLKQ9H2G2 1235 aaPredicted RBP19.08■□□□□ 0.64
CDT1-201ENST00000301019 KIAA0586Q9BVV6 1533 aa19.06■□□□□ 0.64
CDT1-201ENST00000301019 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
CDT1-201ENST00000301019 FAM43AQ8N2R8 423 aa19.04■□□□□ 0.64
CDT1-201ENST00000301019 SPRYD3Q8NCJ5 442 aa19.04■□□□□ 0.64
CDT1-201ENST00000301019 SAMD9Q5K651 1589 aa19.04■□□□□ 0.64
CDT1-201ENST00000301019 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
CDT1-201ENST00000301019 NUP160Q12769 1436 aa19.01■□□□□ 0.63
CDT1-201ENST00000301019 RRP1P56182 461 aaKnown RBP19.01■□□□□ 0.63
CDT1-201ENST00000301019 CDCA7LQ96GN5 454 aa19■□□□□ 0.63
CDT1-201ENST00000301019 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
CDT1-201ENST00000301019 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
CDT1-201ENST00000301019 UGGT2Q9NYU1 1516 aa18.98■□□□□ 0.63
CDT1-201ENST00000301019 RCAN3Q9UKA8 241 aa18.98■□□□□ 0.63
CDT1-201ENST00000301019 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
CDT1-201ENST00000301019 HSP90AA1P07900 732 aaKnown RBP18.97■□□□□ 0.63
CDT1-201ENST00000301019 FMN1Q68DA7 1419 aa18.97■□□□□ 0.63
CDT1-201ENST00000301019 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
CDT1-201ENST00000301019 KIF7Q2M1P5 1343 aa18.95■□□□□ 0.62
CDT1-201ENST00000301019 CRBNQ96SW2 442 aa18.95■□□□□ 0.62
CDT1-201ENST00000301019 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
CDT1-201ENST00000301019 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
CDT1-201ENST00000301019 PANK2Q9BZ23 570 aa18.95■□□□□ 0.62
CDT1-201ENST00000301019 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
CDT1-201ENST00000301019 CCDC7Q96M83 1385 aa18.93■□□□□ 0.62
CDT1-201ENST00000301019 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
CDT1-201ENST00000301019 CASKIN1Q8WXD9 1431 aa18.92■□□□□ 0.62
CDT1-201ENST00000301019 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
CDT1-201ENST00000301019 CHD1O14646 1710 aa18.92■□□□□ 0.62
CDT1-201ENST00000301019 DISP1Q96F81 1524 aa18.91■□□□□ 0.62
CDT1-201ENST00000301019 NBPF8Q3BBV2 869 aa18.91■□□□□ 0.62
CDT1-201ENST00000301019 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
CDT1-201ENST00000301019 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
CDT1-201ENST00000301019 MAP3K1Q13233 1512 aa18.87■□□□□ 0.61
CDT1-201ENST00000301019 TIAM1Q13009 1591 aa18.87■□□□□ 0.61
CDT1-201ENST00000301019 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
CDT1-201ENST00000301019 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
CDT1-201ENST00000301019 CARMIL2Q6F5E8 1435 aa18.83■□□□□ 0.61
CDT1-201ENST00000301019 PNISRQ8TF01 805 aaKnown RBP18.82■□□□□ 0.6
CDT1-201ENST00000301019 CCDC18Q5T9S5 1454 aa18.82■□□□□ 0.6
CDT1-201ENST00000301019 MS4A1P11836 297 aa18.81■□□□□ 0.6
CDT1-201ENST00000301019 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
CDT1-201ENST00000301019 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
CDT1-201ENST00000301019 RBM10P98175 930 aaKnown RBP18.79■□□□□ 0.6
CDT1-201ENST00000301019 PRG4Q92954 1404 aaPredicted RBP18.78■□□□□ 0.6
CDT1-201ENST00000301019 XRCC6P12956 609 aaKnown RBP eCLIP18.77■□□□□ 0.59
CDT1-201ENST00000301019 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
CDT1-201ENST00000301019 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
CDT1-201ENST00000301019 HECW1Q76N89 1606 aa18.74■□□□□ 0.59
CDT1-201ENST00000301019 C8orf34Q49A92 452 aa18.73■□□□□ 0.59
CDT1-201ENST00000301019 LRRIQ1Q96JM4 1722 aa18.73■□□□□ 0.59
CDT1-201ENST00000301019 SEC24BO95487 1268 aa18.73■□□□□ 0.59
CDT1-201ENST00000301019 FAM161AQ3B820 660 aa18.73■□□□□ 0.59
CDT1-201ENST00000301019 RRP9O43818 475 aaKnown RBP18.72■□□□□ 0.59
CDT1-201ENST00000301019 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
CDT1-201ENST00000301019 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
CDT1-201ENST00000301019 SHROOM2Q13796 1616 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms