RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 MYO5CQ9NQX4 1742 aa22.42■■□□□ 1.18
TMEM41B-201ENST00000299596 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
TMEM41B-201ENST00000299596 ADAMTSL3P82987 1691 aa22.39■■□□□ 1.17
TMEM41B-201ENST00000299596 ARHGAP5Q13017 1502 aa22.38■■□□□ 1.17
TMEM41B-201ENST00000299596 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
TMEM41B-201ENST00000299596 YEATS2Q9ULM3 1422 aa22.38■■□□□ 1.17
TMEM41B-201ENST00000299596 PTPRMP28827 1452 aa22.37■■□□□ 1.17
TMEM41B-201ENST00000299596 BCORL1Q5H9F3 1711 aa22.36■■□□□ 1.17
TMEM41B-201ENST00000299596 HECW2Q9P2P5 1572 aa22.35■■□□□ 1.17
TMEM41B-201ENST00000299596 ZNF518AQ6AHZ1 1483 aa22.34■■□□□ 1.17
TMEM41B-201ENST00000299596 AFAP1Q8N556 730 aa22.33■■□□□ 1.17
TMEM41B-201ENST00000299596 ATP10AO60312 1499 aa22.31■■□□□ 1.16
TMEM41B-201ENST00000299596 MADDQ8WXG6 1647 aa22.29■■□□□ 1.16
TMEM41B-201ENST00000299596 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
TMEM41B-201ENST00000299596 CDC42BPBQ9Y5S2 1711 aa22.27■■□□□ 1.16
TMEM41B-201ENST00000299596 PREX2Q70Z35 1606 aa22.27■■□□□ 1.16
TMEM41B-201ENST00000299596 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
TMEM41B-201ENST00000299596 C9orf84Q5VXU9 1444 aa22.26■■□□□ 1.15
TMEM41B-201ENST00000299596 MLECQ14165 292 aa22.26■■□□□ 1.15
TMEM41B-201ENST00000299596 KDM5CP41229 1560 aa22.25■■□□□ 1.15
TMEM41B-201ENST00000299596 MTUS2Q5JR59 1369 aa22.24■■□□□ 1.15
TMEM41B-201ENST00000299596 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
TMEM41B-201ENST00000299596 ABCC1P33527 1531 aa22.22■■□□□ 1.15
TMEM41B-201ENST00000299596 GPATCH8Q9UKJ3 1502 aaKnown RBP22.22■■□□□ 1.15
TMEM41B-201ENST00000299596 ZNF777Q9ULD5 760 aaPredicted RBP22.22■■□□□ 1.15
TMEM41B-201ENST00000299596 TRAPPC8Q9Y2L5 1435 aa22.22■■□□□ 1.15
TMEM41B-201ENST00000299596 ARHGEF12Q9NZN5 1544 aa22.21■■□□□ 1.15
TMEM41B-201ENST00000299596 SIGLEC1Q9BZZ2 1709 aa22.21■■□□□ 1.15
TMEM41B-201ENST00000299596 RIMS1Q86UR5 1692 aaKnown RBP22.2■■□□□ 1.14
TMEM41B-201ENST00000299596 CDC42BPAQ5VT25 1732 aa22.19■■□□□ 1.14
TMEM41B-201ENST00000299596 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
TMEM41B-201ENST00000299596 CCNB3Q8WWL7 1395 aa22.19■■□□□ 1.14
TMEM41B-201ENST00000299596 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
TMEM41B-201ENST00000299596 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
TMEM41B-201ENST00000299596 DIP2CQ9Y2E4 1556 aa22.14■■□□□ 1.14
TMEM41B-201ENST00000299596 ITSN2Q9NZM3 1697 aa22.14■■□□□ 1.14
TMEM41B-201ENST00000299596 HNRNPMP52272 730 aaKnown RBP eCLIP22.14■■□□□ 1.13
TMEM41B-201ENST00000299596 KIAA1107Q9UPP5 1409 aa22.14■■□□□ 1.13
TMEM41B-201ENST00000299596 REREQ9P2R6 1566 aa22.13■■□□□ 1.13
TMEM41B-201ENST00000299596 PLEKHH2Q8IVE3 1493 aa22.13■■□□□ 1.13
TMEM41B-201ENST00000299596 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
TMEM41B-201ENST00000299596 LMTK3Q96Q04 1460 aa22.11■■□□□ 1.13
TMEM41B-201ENST00000299596 SPAG9O60271 1321 aaKnown RBP22.11■■□□□ 1.13
TMEM41B-201ENST00000299596 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
TMEM41B-201ENST00000299596 FER1L4A9Z1Z3 1794 aa22.1■■□□□ 1.13
TMEM41B-201ENST00000299596 ABCA6Q8N139 1617 aa22.1■■□□□ 1.13
TMEM41B-201ENST00000299596 SYCP2Q9BX26 1530 aa22.09■■□□□ 1.13
TMEM41B-201ENST00000299596 AGLP35573 1532 aa22.08■■□□□ 1.13
TMEM41B-201ENST00000299596 KIDINS220Q9ULH0 1771 aa22.06■■□□□ 1.12
TMEM41B-201ENST00000299596 CEBPAP49715 358 aaPredicted RBP22.06■■□□□ 1.12
TMEM41B-201ENST00000299596 ESF1Q9H501 851 aaKnown RBP22.06■■□□□ 1.12
TMEM41B-201ENST00000299596 TIAM1Q13009 1591 aa22.03■■□□□ 1.12
TMEM41B-201ENST00000299596 ZNF644Q9H582 1327 aaPredicted RBP22.03■■□□□ 1.12
TMEM41B-201ENST00000299596 VPS8Q8N3P4 1428 aa22.03■■□□□ 1.12
TMEM41B-201ENST00000299596 HSPA2P54652 639 aa22.03■■□□□ 1.12
TMEM41B-201ENST00000299596 ILDR1Q86SU0 546 aaPredicted RBP22.03■■□□□ 1.12
TMEM41B-201ENST00000299596 ATP7AQ04656 1500 aa21.99■■□□□ 1.11
TMEM41B-201ENST00000299596 NCOA2Q15596 1464 aa21.99■■□□□ 1.11
TMEM41B-201ENST00000299596 MBD5Q9P267 1494 aa21.97■■□□□ 1.11
TMEM41B-201ENST00000299596 CNTLNQ9NXG0 1405 aa21.97■■□□□ 1.11
TMEM41B-201ENST00000299596 RSPH4AQ5TD94 716 aa21.97■■□□□ 1.11
TMEM41B-201ENST00000299596 SUPT6HQ7KZ85 1726 aaKnown RBP21.96■■□□□ 1.11
TMEM41B-201ENST00000299596 A2MP01023 1474 aa21.95■■□□□ 1.1
TMEM41B-201ENST00000299596 INO80Q9ULG1 1556 aaPredicted RBP21.95■■□□□ 1.1
TMEM41B-201ENST00000299596 RTEL1-TNFRSF6BF6WH68 1400 aa21.94■■□□□ 1.1
TMEM41B-201ENST00000299596 LRRC9Q6ZRR7 1453 aa21.93■■□□□ 1.1
TMEM41B-201ENST00000299596 UHRF1BP1Q6BDS2 1440 aa21.92■■□□□ 1.1
TMEM41B-201ENST00000299596 MAP3K1Q13233 1512 aa21.92■■□□□ 1.1
TMEM41B-201ENST00000299596 PREX1Q8TCU6 1659 aa21.91■■□□□ 1.1
TMEM41B-201ENST00000299596 PLXNC1O60486 1568 aa21.9■■□□□ 1.1
TMEM41B-201ENST00000299596 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.1
TMEM41B-201ENST00000299596 SETD1BQ9UPS6 1966 aaKnown RBP21.89■■□□□ 1.1
TMEM41B-201ENST00000299596 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
TMEM41B-201ENST00000299596 GGT6Q6P531 493 aa21.89■■□□□ 1.09
TMEM41B-201ENST00000299596 CAMSAP2Q08AD1 1489 aa21.88■■□□□ 1.09
TMEM41B-201ENST00000299596 CCDC141Q6ZP82 1450 aa21.88■■□□□ 1.09
TMEM41B-201ENST00000299596 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
TMEM41B-201ENST00000299596 C3P01024 1663 aa21.88■■□□□ 1.09
TMEM41B-201ENST00000299596 DHX29Q7Z478 1369 aaKnown RBP21.87■■□□□ 1.09
TMEM41B-201ENST00000299596 TSPY4P0CV99 314 aa21.86■■□□□ 1.09
TMEM41B-201ENST00000299596 TSPY10P0CW01 314 aa21.86■■□□□ 1.09
TMEM41B-201ENST00000299596 APLP2Q06481 763 aa21.85■■□□□ 1.09
TMEM41B-201ENST00000299596 DMRT2Q9Y5R5 561 aa21.85■■□□□ 1.09
TMEM41B-201ENST00000299596 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
TMEM41B-201ENST00000299596 FBXO41Q8TF61 875 aa21.84■■□□□ 1.09
TMEM41B-201ENST00000299596 NPATQ14207 1427 aa21.83■■□□□ 1.09
TMEM41B-201ENST00000299596 MROH2AA6NES4 1674 aa21.81■■□□□ 1.08
TMEM41B-201ENST00000299596 ARHGEF5Q12774 1597 aa21.8■■□□□ 1.08
TMEM41B-201ENST00000299596 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
TMEM41B-201ENST00000299596 KIF3BO15066 747 aa21.79■■□□□ 1.08
TMEM41B-201ENST00000299596 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
TMEM41B-201ENST00000299596 CLTCQ00610 1675 aaKnown RBP21.75■■□□□ 1.07
TMEM41B-201ENST00000299596 PTPRKQ15262 1439 aa21.74■■□□□ 1.07
TMEM41B-201ENST00000299596 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
TMEM41B-201ENST00000299596 CERKQ8TCT0 537 aa21.72■■□□□ 1.07
TMEM41B-201ENST00000299596 WASHC2CQ9Y4E1 1318 aa21.71■■□□□ 1.07
TMEM41B-201ENST00000299596 PTPRTO14522 1441 aa21.7■■□□□ 1.06
TMEM41B-201ENST00000299596 FAM135AQ9P2D6 1515 aa21.69■■□□□ 1.06
TMEM41B-201ENST00000299596 MAST1Q9Y2H9 1570 aa21.69■■□□□ 1.06
TMEM41B-201ENST00000299596 NCOA1Q15788 1441 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms