RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 GRIN2AQ12879 1464 aa19.11■□□□□ 0.65
BCCIP-202ENST00000299130 RAPGEF6Q8TEU7 1601 aa19.1■□□□□ 0.65
BCCIP-202ENST00000299130 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
BCCIP-202ENST00000299130 DNMT1P26358 1616 aaKnown RBP19.09■□□□□ 0.65
BCCIP-202ENST00000299130 ROCK1Q13464 1354 aa19.07■□□□□ 0.64
BCCIP-202ENST00000299130 PRG4Q92954 1404 aaPredicted RBP19.07■□□□□ 0.64
BCCIP-202ENST00000299130 ANKRD30BQ9BXX2 1392 aa19.06■□□□□ 0.64
BCCIP-202ENST00000299130 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
BCCIP-202ENST00000299130 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
BCCIP-202ENST00000299130 NBPF8Q3BBV2 869 aa19.06■□□□□ 0.64
BCCIP-202ENST00000299130 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
BCCIP-202ENST00000299130 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
BCCIP-202ENST00000299130 RPRD2Q5VT52 1461 aaKnown RBP19.02■□□□□ 0.64
BCCIP-202ENST00000299130 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
BCCIP-202ENST00000299130 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
BCCIP-202ENST00000299130 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
BCCIP-202ENST00000299130 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
BCCIP-202ENST00000299130 CCDC184Q52MB2 194 aa19■□□□□ 0.63
BCCIP-202ENST00000299130 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
BCCIP-202ENST00000299130 FBLN2P98095 1184 aa18.99■□□□□ 0.63
BCCIP-202ENST00000299130 CAMSAP2Q08AD1 1489 aa18.99■□□□□ 0.63
BCCIP-202ENST00000299130 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
BCCIP-202ENST00000299130 NEFLP07196 543 aa18.98■□□□□ 0.63
BCCIP-202ENST00000299130 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
BCCIP-202ENST00000299130 KIF14Q15058 1648 aa18.98■□□□□ 0.63
BCCIP-202ENST00000299130 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
BCCIP-202ENST00000299130 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
BCCIP-202ENST00000299130 NCOA1Q15788 1441 aa18.97■□□□□ 0.63
BCCIP-202ENST00000299130 PZPP20742 1482 aa18.97■□□□□ 0.63
BCCIP-202ENST00000299130 GPATCH8Q9UKJ3 1502 aaKnown RBP18.96■□□□□ 0.63
BCCIP-202ENST00000299130 CCDC7Q96M83 1385 aa18.96■□□□□ 0.63
BCCIP-202ENST00000299130 ERCC6Q03468 1493 aa18.96■□□□□ 0.63
BCCIP-202ENST00000299130 MAGI1Q96QZ7 1491 aaPredicted RBP18.96■□□□□ 0.63
BCCIP-202ENST00000299130 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
BCCIP-202ENST00000299130 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
BCCIP-202ENST00000299130 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
BCCIP-202ENST00000299130 ITSN2Q9NZM3 1697 aa18.91■□□□□ 0.62
BCCIP-202ENST00000299130 ADCY10Q96PN6 1610 aa18.9■□□□□ 0.62
BCCIP-202ENST00000299130 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
BCCIP-202ENST00000299130 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
BCCIP-202ENST00000299130 KIF7Q2M1P5 1343 aa18.89■□□□□ 0.61
BCCIP-202ENST00000299130 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
BCCIP-202ENST00000299130 NUP160Q12769 1436 aa18.88■□□□□ 0.61
BCCIP-202ENST00000299130 ADGRL2O95490 1459 aa18.87■□□□□ 0.61
BCCIP-202ENST00000299130 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
BCCIP-202ENST00000299130 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
BCCIP-202ENST00000299130 PKD2Q13563 968 aa18.85■□□□□ 0.61
BCCIP-202ENST00000299130 KIAA1107Q9UPP5 1409 aa18.85■□□□□ 0.61
BCCIP-202ENST00000299130 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
BCCIP-202ENST00000299130 MBD5Q9P267 1494 aa18.83■□□□□ 0.61
BCCIP-202ENST00000299130 ZNF326Q5BKZ1 582 aaKnown RBP18.83■□□□□ 0.6
BCCIP-202ENST00000299130 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
BCCIP-202ENST00000299130 CDC42BPAQ5VT25 1732 aa18.82■□□□□ 0.6
BCCIP-202ENST00000299130 ATP10BO94823 1461 aa18.82■□□□□ 0.6
BCCIP-202ENST00000299130 MRS2Q9HD23 443 aa18.82■□□□□ 0.6
BCCIP-202ENST00000299130 ABCA8O94911 1581 aa18.81■□□□□ 0.6
BCCIP-202ENST00000299130 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
BCCIP-202ENST00000299130 PLEKHD1A6NEE1 506 aa18.81■□□□□ 0.6
BCCIP-202ENST00000299130 ANKRD50Q9ULJ7 1429 aa18.81■□□□□ 0.6
BCCIP-202ENST00000299130 ABCC10Q5T3U5 1492 aa18.8■□□□□ 0.6
BCCIP-202ENST00000299130 BCORL1Q5H9F3 1711 aa18.79■□□□□ 0.6
BCCIP-202ENST00000299130 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.59
BCCIP-202ENST00000299130 RBM19Q9Y4C8 960 aaKnown RBP18.77■□□□□ 0.59
BCCIP-202ENST00000299130 C9orf84Q5VXU9 1444 aa18.76■□□□□ 0.59
BCCIP-202ENST00000299130 USP47Q96K76 1375 aa18.76■□□□□ 0.59
BCCIP-202ENST00000299130 NUP155O75694 1391 aa18.75■□□□□ 0.59
BCCIP-202ENST00000299130 POLR3GLQ9BT43 218 aa18.75■□□□□ 0.59
BCCIP-202ENST00000299130 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.59
BCCIP-202ENST00000299130 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
BCCIP-202ENST00000299130 KDM5CP41229 1560 aa18.72■□□□□ 0.59
BCCIP-202ENST00000299130 SHANK2Q9UPX8 1470 aa18.71■□□□□ 0.59
BCCIP-202ENST00000299130 ZBED9Q6R2W3 1325 aa18.7■□□□□ 0.58
BCCIP-202ENST00000299130 TSPY4P0CV99 314 aa18.69■□□□□ 0.58
BCCIP-202ENST00000299130 TSPY10P0CW01 314 aa18.69■□□□□ 0.58
BCCIP-202ENST00000299130 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
BCCIP-202ENST00000299130 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
BCCIP-202ENST00000299130 UHRF1BP1Q6BDS2 1440 aa18.67■□□□□ 0.58
BCCIP-202ENST00000299130 ANP32EQ9BTT0 268 aa18.66■□□□□ 0.58
BCCIP-202ENST00000299130 KDM5DQ9BY66 1539 aa18.66■□□□□ 0.58
BCCIP-202ENST00000299130 PTPRGP23470 1445 aa18.66■□□□□ 0.58
BCCIP-202ENST00000299130 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
BCCIP-202ENST00000299130 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
BCCIP-202ENST00000299130 SAMD9LQ8IVG5 1584 aa18.64■□□□□ 0.57
BCCIP-202ENST00000299130 CDC42BPBQ9Y5S2 1711 aa18.63■□□□□ 0.57
BCCIP-202ENST00000299130 ARHGEF5Q12774 1597 aa18.63■□□□□ 0.57
BCCIP-202ENST00000299130 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
BCCIP-202ENST00000299130 DCAF11Q8TEB1 546 aa18.62■□□□□ 0.57
BCCIP-202ENST00000299130 ARHGEF12Q9NZN5 1544 aa18.61■□□□□ 0.57
BCCIP-202ENST00000299130 ST20-MTHFSA0A0A6YYL1 179 aa18.61■□□□□ 0.57
BCCIP-202ENST00000299130 PPP4R2Q9NY27 417 aa18.6■□□□□ 0.57
BCCIP-202ENST00000299130 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
BCCIP-202ENST00000299130 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
BCCIP-202ENST00000299130 PREX2Q70Z35 1606 aa18.58■□□□□ 0.57
BCCIP-202ENST00000299130 ERICH6BQ5W0A0 696 aa18.58■□□□□ 0.56
BCCIP-202ENST00000299130 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
BCCIP-202ENST00000299130 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
BCCIP-202ENST00000299130 SYCP2Q9BX26 1530 aa18.55■□□□□ 0.56
BCCIP-202ENST00000299130 TTC37Q6PGP7 1564 aa18.54■□□□□ 0.56
BCCIP-202ENST00000299130 PNISRQ8TF01 805 aaKnown RBP18.54■□□□□ 0.56
BCCIP-202ENST00000299130 CHD1O14646 1710 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms