RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 OSCARQ8IYS5 282 aa21■□□□□ 0.95
C9orf3-202ENST00000297979 DAPK1P53355 1430 aa21■□□□□ 0.95
C9orf3-202ENST00000297979 ZNF644Q9H582 1327 aaPredicted RBP20.99■□□□□ 0.95
C9orf3-202ENST00000297979 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
C9orf3-202ENST00000297979 MAPKBP1O60336 1514 aa20.97■□□□□ 0.95
C9orf3-202ENST00000297979 ABCC5O15440 1437 aa20.97■□□□□ 0.95
C9orf3-202ENST00000297979 KDM5BQ9UGL1 1544 aa20.97■□□□□ 0.95
C9orf3-202ENST00000297979 CHIC2Q9UKJ5 165 aa20.95■□□□□ 0.94
C9orf3-202ENST00000297979 ERICH6Q7L0X2 663 aa20.94■□□□□ 0.94
C9orf3-202ENST00000297979 ROCK1Q13464 1354 aa20.93■□□□□ 0.94
C9orf3-202ENST00000297979 RRP7BPQ9NSQ0 103 aa20.92■□□□□ 0.94
C9orf3-202ENST00000297979 PREX2Q70Z35 1606 aa20.92■□□□□ 0.94
C9orf3-202ENST00000297979 CROCC2H7BZ55 1655 aa20.91■□□□□ 0.94
C9orf3-202ENST00000297979 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
C9orf3-202ENST00000297979 TTC37Q6PGP7 1564 aa20.9■□□□□ 0.94
C9orf3-202ENST00000297979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.89■□□□□ 0.94
C9orf3-202ENST00000297979 CDC42BPBQ9Y5S2 1711 aa20.89■□□□□ 0.93
C9orf3-202ENST00000297979 ADGBQ8N7X0 1667 aa20.88■□□□□ 0.93
C9orf3-202ENST00000297979 KDM6BO15054 1643 aa20.85■□□□□ 0.93
C9orf3-202ENST00000297979 MYO5CQ9NQX4 1742 aa20.85■□□□□ 0.93
C9orf3-202ENST00000297979 ADGRL2O95490 1459 aa20.83■□□□□ 0.93
C9orf3-202ENST00000297979 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.93
C9orf3-202ENST00000297979 SHANK2Q9UPX8 1470 aa20.83■□□□□ 0.92
C9orf3-202ENST00000297979 ARHGEF5Q12774 1597 aa20.82■□□□□ 0.92
C9orf3-202ENST00000297979 ARHGAP5Q13017 1502 aa20.81■□□□□ 0.92
C9orf3-202ENST00000297979 KCNH8Q96L42 1107 aa20.8■□□□□ 0.92
C9orf3-202ENST00000297979 NCOA1Q15788 1441 aa20.8■□□□□ 0.92
C9orf3-202ENST00000297979 ACIN1Q9UKV3 1341 aaKnown RBP20.79■□□□□ 0.92
C9orf3-202ENST00000297979 MBD5Q9P267 1494 aa20.77■□□□□ 0.92
C9orf3-202ENST00000297979 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.92
C9orf3-202ENST00000297979 ANKRD30AQ9BXX3 1397 aa20.77■□□□□ 0.92
C9orf3-202ENST00000297979 C9orf84Q5VXU9 1444 aa20.76■□□□□ 0.91
C9orf3-202ENST00000297979 DAXXQ9UER7 740 aaPredicted RBP20.75■□□□□ 0.91
C9orf3-202ENST00000297979 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
C9orf3-202ENST00000297979 PLCH2O75038 1416 aa20.74■□□□□ 0.91
C9orf3-202ENST00000297979 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
C9orf3-202ENST00000297979 PLEKHH2Q8IVE3 1493 aa20.74■□□□□ 0.91
C9orf3-202ENST00000297979 SYCP2Q9BX26 1530 aa20.73■□□□□ 0.91
C9orf3-202ENST00000297979 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.916e-7■■■□□ 18.3
C9orf3-202ENST00000297979 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
C9orf3-202ENST00000297979 TSPY4P0CV99 314 aa20.72■□□□□ 0.91
C9orf3-202ENST00000297979 TSPY10P0CW01 314 aa20.72■□□□□ 0.91
C9orf3-202ENST00000297979 RSPH4AQ5TD94 716 aa20.72■□□□□ 0.91
C9orf3-202ENST00000297979 KIAA1107Q9UPP5 1409 aa20.71■□□□□ 0.91
C9orf3-202ENST00000297979 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-202ENST00000297979 ARAP3Q8WWN8 1544 aa20.7■□□□□ 0.9
C9orf3-202ENST00000297979 NEUROD1Q13562 356 aa20.7■□□□□ 0.9
C9orf3-202ENST00000297979 DENND4BO75064 1496 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-202ENST00000297979 ASXL2Q76L83 1435 aa20.69■□□□□ 0.9
C9orf3-202ENST00000297979 TIMELESSQ9UNS1 1208 aa20.69■□□□□ 0.9
C9orf3-202ENST00000297979 ABCA9Q8IUA7 1624 aa20.68■□□□□ 0.9
C9orf3-202ENST00000297979 MAST1Q9Y2H9 1570 aa20.68■□□□□ 0.9
C9orf3-202ENST00000297979 ANKRD50Q9ULJ7 1429 aa20.67■□□□□ 0.9
C9orf3-202ENST00000297979 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
C9orf3-202ENST00000297979 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
C9orf3-202ENST00000297979 NPM1P06748 294 aaKnown RBP eCLIP20.66■□□□□ 0.9
C9orf3-202ENST00000297979 ABCC1P33527 1531 aa20.65■□□□□ 0.9
C9orf3-202ENST00000297979 KIF15Q9NS87 1388 aa20.64■□□□□ 0.89
C9orf3-202ENST00000297979 ARHGEF12Q9NZN5 1544 aa20.63■□□□□ 0.89
C9orf3-202ENST00000297979 PZPP20742 1482 aa20.6■□□□□ 0.89
C9orf3-202ENST00000297979 PLXNC1O60486 1568 aa20.6■□□□□ 0.89
C9orf3-202ENST00000297979 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
C9orf3-202ENST00000297979 SLC4A1APQ9BWU0 796 aaKnown RBP20.58■□□□□ 0.88
C9orf3-202ENST00000297979 FANCAO15360 1455 aa20.57■□□□□ 0.88
C9orf3-202ENST00000297979 KDM5DQ9BY66 1539 aa20.55■□□□□ 0.88
C9orf3-202ENST00000297979 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
C9orf3-202ENST00000297979 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
C9orf3-202ENST00000297979 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
C9orf3-202ENST00000297979 DIEXFQ68CQ4 756 aaKnown RBP20.55■□□□□ 0.88
C9orf3-202ENST00000297979 TRAPPC8Q9Y2L5 1435 aa20.54■□□□□ 0.88
C9orf3-202ENST00000297979 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
C9orf3-202ENST00000297979 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
C9orf3-202ENST00000297979 FOXD1Q16676 465 aa20.53■□□□□ 0.88
C9orf3-202ENST00000297979 DUOX2Q9NRD8 1548 aa20.5■□□□□ 0.87
C9orf3-202ENST00000297979 NUP155O75694 1391 aa20.5■□□□□ 0.87
C9orf3-202ENST00000297979 ADGRL1O94910 1474 aa20.49■□□□□ 0.87
C9orf3-202ENST00000297979 RTEL1-TNFRSF6BF6WH68 1400 aa20.48■□□□□ 0.87
C9orf3-202ENST00000297979 UNC13BO14795 1591 aa20.47■□□□□ 0.87
C9orf3-202ENST00000297979 ZFYVE16Q7Z3T8 1539 aa20.47■□□□□ 0.87
C9orf3-202ENST00000297979 RPRD2Q5VT52 1461 aaKnown RBP20.47■□□□□ 0.87
C9orf3-202ENST00000297979 CFAP74Q9C0B2 1584 aa20.47■□□□□ 0.87
C9orf3-202ENST00000297979 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
C9orf3-202ENST00000297979 ERBINQ96RT1 1412 aa20.46■□□□□ 0.87
C9orf3-202ENST00000297979 SPAG9O60271 1321 aaKnown RBP20.46■□□□□ 0.87
C9orf3-202ENST00000297979 CD109Q6YHK3 1445 aa20.46■□□□□ 0.87
C9orf3-202ENST00000297979 PKD2Q13563 968 aa20.45■□□□□ 0.86
C9orf3-202ENST00000297979 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
C9orf3-202ENST00000297979 INO80Q9ULG1 1556 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-202ENST00000297979 AFAP1Q8N556 730 aa20.44■□□□□ 0.86
C9orf3-202ENST00000297979 FAM135AQ9P2D6 1515 aa20.43■□□□□ 0.86
C9orf3-202ENST00000297979 ATP7AQ04656 1500 aa20.42■□□□□ 0.86
C9orf3-202ENST00000297979 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.85
C9orf3-202ENST00000297979 IQGAP3Q86VI3 1631 aa20.39■□□□□ 0.85
C9orf3-202ENST00000297979 TEX14Q8IWB6 1497 aa20.38■□□□□ 0.85
C9orf3-202ENST00000297979 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
C9orf3-202ENST00000297979 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
C9orf3-202ENST00000297979 MAP3K4Q9Y6R4 1608 aa20.35■□□□□ 0.85
C9orf3-202ENST00000297979 GLI2P10070 1586 aa20.34■□□□□ 0.85
C9orf3-202ENST00000297979 NEO1Q92859 1461 aa20.34■□□□□ 0.85
C9orf3-202ENST00000297979 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms