RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 CCDC18Q5T9S5 1454 aa23.89■■□□□ 1.42
ITGB5-201ENST00000296181 TMF1P82094 1093 aa23.89■■□□□ 1.41
ITGB5-201ENST00000296181 PDE4AP27815 886 aa23.88■■□□□ 1.41
ITGB5-201ENST00000296181 CDCA8Q53HL2 280 aa23.87■■□□□ 1.41
ITGB5-201ENST00000296181 KTN1Q86UP2 1357 aaKnown RBP23.87■■□□□ 1.41
ITGB5-201ENST00000296181 NAP1L5Q96NT1 182 aaPredicted RBP23.87■■□□□ 1.41
ITGB5-201ENST00000296181 RALBP1Q15311 655 aa23.86■■□□□ 1.41
ITGB5-201ENST00000296181 SLKQ9H2G2 1235 aaPredicted RBP23.86■■□□□ 1.41
ITGB5-201ENST00000296181 FTSJ3Q8IY81 847 aaKnown RBP23.85■■□□□ 1.41
ITGB5-201ENST00000296181 RRBP1Q9P2E9 1410 aaKnown RBP23.85■■□□□ 1.41
ITGB5-201ENST00000296181 ST20-MTHFSA0A0A6YYL1 179 aa23.85■■□□□ 1.41
ITGB5-201ENST00000296181 CCDC184Q52MB2 194 aa23.84■■□□□ 1.41
ITGB5-201ENST00000296181 STAG3Q9UJ98 1225 aa23.84■■□□□ 1.41
ITGB5-201ENST00000296181 NCAPD3P42695 1498 aa23.83■■□□□ 1.41
ITGB5-201ENST00000296181 NUP155O75694 1391 aa23.83■■□□□ 1.4
ITGB5-201ENST00000296181 NLRP13Q86W25 1043 aa23.82■■□□□ 1.4
ITGB5-201ENST00000296181 MSH5O43196 834 aa23.81■■□□□ 1.4
ITGB5-201ENST00000296181 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
ITGB5-201ENST00000296181 PAK3O75914 559 aaPredicted RBP23.81■■□□□ 1.4
ITGB5-201ENST00000296181 NCLP19338 710 aaKnown RBP23.79■■□□□ 1.4
ITGB5-201ENST00000296181 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
ITGB5-201ENST00000296181 RRP1P56182 461 aaKnown RBP23.77■■□□□ 1.4
ITGB5-201ENST00000296181 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.4
ITGB5-201ENST00000296181 CFAP53Q96M91 514 aa23.75■■□□□ 1.39
ITGB5-201ENST00000296181 CCDC7Q96M83 1385 aa23.75■■□□□ 1.39
ITGB5-201ENST00000296181 GZF1Q9H116 711 aaPredicted RBP23.75■■□□□ 1.39
ITGB5-201ENST00000296181 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
ITGB5-201ENST00000296181 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
ITGB5-201ENST00000296181 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
ITGB5-201ENST00000296181 HNRNPMP52272 730 aaKnown RBP eCLIP23.73■■□□□ 1.391e-6■■■■□ 22.5
ITGB5-201ENST00000296181 MYH16Q9H6N6 1097 aa23.72■■□□□ 1.39
ITGB5-201ENST00000296181 FGD6Q6ZV73 1430 aa23.71■■□□□ 1.39
ITGB5-201ENST00000296181 ZNF644Q9H582 1327 aaPredicted RBP23.7■■□□□ 1.39
ITGB5-201ENST00000296181 PDE3BQ13370 1112 aa23.7■■□□□ 1.39
ITGB5-201ENST00000296181 CCDC146Q8IYE0 955 aa23.7■■□□□ 1.38
ITGB5-201ENST00000296181 CRBNQ96SW2 442 aa23.7■■□□□ 1.38
ITGB5-201ENST00000296181 UACAQ9BZF9 1416 aa23.69■■□□□ 1.38
ITGB5-201ENST00000296181 MYBBP1AQ9BQG0 1328 aaKnown RBP23.69■■□□□ 1.38
ITGB5-201ENST00000296181 GOLGA6L22H0YM25 854 aa23.69■■□□□ 1.38
ITGB5-201ENST00000296181 USP47Q96K76 1375 aa23.69■■□□□ 1.38
ITGB5-201ENST00000296181 CFTRP13569 1480 aa23.68■■□□□ 1.38
ITGB5-201ENST00000296181 U2SURPO15042 1029 aaKnown RBP23.67■■□□□ 1.38
ITGB5-201ENST00000296181 CUX1P39880 1505 aa23.67■■□□□ 1.38
ITGB5-201ENST00000296181 GOLGA2Q08379 1002 aa23.67■■□□□ 1.38
ITGB5-201ENST00000296181 USP35Q9P2H5 1018 aa23.66■■□□□ 1.38
ITGB5-201ENST00000296181 JPH4Q96JJ6 628 aa23.66■■□□□ 1.38
ITGB5-201ENST00000296181 ARID4BQ4LE39 1312 aaPredicted RBP23.66■■□□□ 1.38
ITGB5-201ENST00000296181 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
ITGB5-201ENST00000296181 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
ITGB5-201ENST00000296181 ESF1Q9H501 851 aaKnown RBP23.64■■□□□ 1.37
ITGB5-201ENST00000296181 TPRNQ4KMQ1 711 aa23.63■■□□□ 1.37
ITGB5-201ENST00000296181 GSE1Q14687 1217 aa23.63■■□□□ 1.37
ITGB5-201ENST00000296181 CLUAP1Q96AJ1 413 aa23.63■■□□□ 1.37
ITGB5-201ENST00000296181 PANK3Q9H999 370 aa23.63■■□□□ 1.37
ITGB5-201ENST00000296181 ANKRD30AQ9BXX3 1397 aa23.62■■□□□ 1.37
ITGB5-201ENST00000296181 HSP90AB1P08238 724 aaKnown RBP23.62■■□□□ 1.37
ITGB5-201ENST00000296181 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
ITGB5-201ENST00000296181 NESP48681 1621 aa23.61■■□□□ 1.37
ITGB5-201ENST00000296181 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
ITGB5-201ENST00000296181 AKNAQ7Z591 1439 aa23.61■■□□□ 1.37
ITGB5-201ENST00000296181 GAPVD1Q14C86 1478 aa23.61■■□□□ 1.37
ITGB5-201ENST00000296181 L1TD1Q5T7N2 865 aaKnown RBP23.6■■□□□ 1.37
ITGB5-201ENST00000296181 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
ITGB5-201ENST00000296181 MAPK8IP3Q9UPT6 1336 aa23.6■■□□□ 1.37
ITGB5-201ENST00000296181 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
ITGB5-201ENST00000296181 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
ITGB5-201ENST00000296181 NBPF8Q3BBV2 869 aa23.58■■□□□ 1.37
ITGB5-201ENST00000296181 HSCBQ8IWL3 235 aa23.57■■□□□ 1.36
ITGB5-201ENST00000296181 CDCA7LQ96GN5 454 aa23.56■■□□□ 1.36
ITGB5-201ENST00000296181 IL27Q8NEV9 243 aa23.56■■□□□ 1.36
ITGB5-201ENST00000296181 FAM161AQ3B820 660 aa23.55■■□□□ 1.36
ITGB5-201ENST00000296181 AQRO60306 1485 aaKnown RBP eCLIP23.54■■□□□ 1.362e-6■■□□□ 11.9
ITGB5-201ENST00000296181 MS4A1P11836 297 aa23.53■■□□□ 1.36
ITGB5-201ENST00000296181 MYOM3Q5VTT5 1437 aa23.53■■□□□ 1.36
ITGB5-201ENST00000296181 SAFB2Q14151 953 aaKnown RBP eCLIP23.53■■□□□ 1.36
ITGB5-201ENST00000296181 CENPQQ7L2Z9 268 aaPredicted RBP23.52■■□□□ 1.36
ITGB5-201ENST00000296181 PTMAP06454 111 aaKnown RBP23.51■■□□□ 1.35
ITGB5-201ENST00000296181 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
ITGB5-201ENST00000296181 MFAP1P55081 439 aaKnown RBP23.5■■□□□ 1.35
ITGB5-201ENST00000296181 ANO8Q9HCE9 1232 aaPredicted RBP23.5■■□□□ 1.35
ITGB5-201ENST00000296181 BCL2L13Q9BXK5 485 aa23.5■■□□□ 1.35
ITGB5-201ENST00000296181 C11orf95C9JLR9 678 aaPredicted RBP23.49■■□□□ 1.35
ITGB5-201ENST00000296181 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
ITGB5-201ENST00000296181 RRP7AQ9Y3A4 280 aaKnown RBP23.48■■□□□ 1.35
ITGB5-201ENST00000296181 U2AF1L5P0DN76 240 aaPredicted RBP23.48■■□□□ 1.35
ITGB5-201ENST00000296181 U2AF1Q01081 240 aaKnown RBP eCLIP23.48■■□□□ 1.35
ITGB5-201ENST00000296181 NFKBIBQ15653 356 aa23.47■■□□□ 1.35
ITGB5-201ENST00000296181 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
ITGB5-201ENST00000296181 DNTTIP2Q5QJE6 756 aaKnown RBP23.46■■□□□ 1.35
ITGB5-201ENST00000296181 RWDD1Q9H446 243 aaPredicted RBP23.46■■□□□ 1.35
ITGB5-201ENST00000296181 COG6Q9Y2V7 657 aa23.45■■□□□ 1.34
ITGB5-201ENST00000296181 NCOA2Q15596 1464 aa23.45■■□□□ 1.34
ITGB5-201ENST00000296181 APAF1O14727 1248 aa23.45■■□□□ 1.34
ITGB5-201ENST00000296181 GGT6Q6P531 493 aa23.45■■□□□ 1.34
ITGB5-201ENST00000296181 CENPJQ9HC77 1338 aaPredicted RBP23.44■■□□□ 1.34
ITGB5-201ENST00000296181 GOLGA6L3A6NEY3 463 aa23.43■■□□□ 1.34
ITGB5-201ENST00000296181 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
ITGB5-201ENST00000296181 BRPF3Q9ULD4 1205 aa23.43■■□□□ 1.34
ITGB5-201ENST00000296181 PNISRQ8TF01 805 aaKnown RBP23.43■■□□□ 1.34
ITGB5-201ENST00000296181 EFCAB2Q5VUJ9 269 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms