RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 NBPF8Q3BBV2 869 aa27.21■■□□□ 1.95
NKX6-1-201ENST00000295886 ABCC5O15440 1437 aa27.21■■□□□ 1.95
NKX6-1-201ENST00000295886 NUP153P49790 1475 aaKnown RBP27.21■■□□□ 1.95
NKX6-1-201ENST00000295886 ANP32EQ9BTT0 268 aa27.2■■□□□ 1.94
NKX6-1-201ENST00000295886 SLC4A1APQ9BWU0 796 aaKnown RBP27.2■■□□□ 1.94
NKX6-1-201ENST00000295886 IRX6P78412 446 aaPredicted RBP27.19■■□□□ 1.94
NKX6-1-201ENST00000295886 KIAA0556O60303 1618 aa27.18■■□□□ 1.94
NKX6-1-201ENST00000295886 KIAA0586Q9BVV6 1533 aa27.17■■□□□ 1.94
NKX6-1-201ENST00000295886 ANKRD30BQ9BXX2 1392 aa27.16■■□□□ 1.94
NKX6-1-201ENST00000295886 IFT140Q96RY7 1462 aa27.15■■□□□ 1.94
NKX6-1-201ENST00000295886 ZNF777Q9ULD5 760 aaPredicted RBP27.15■■□□□ 1.94
NKX6-1-201ENST00000295886 PRG4Q92954 1404 aaPredicted RBP27.14■■□□□ 1.94
NKX6-1-201ENST00000295886 FBLN2P98095 1184 aa27.12■■□□□ 1.93
NKX6-1-201ENST00000295886 CNTLNQ9NXG0 1405 aa27.11■■□□□ 1.93
NKX6-1-201ENST00000295886 ROCK1Q13464 1354 aa27.11■■□□□ 1.93
NKX6-1-201ENST00000295886 CDK11AQ9UQ88 783 aaPredicted RBP27.11■■□□□ 1.93
NKX6-1-201ENST00000295886 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
NKX6-1-201ENST00000295886 CCDC7Q96M83 1385 aa27.1■■□□□ 1.93
NKX6-1-201ENST00000295886 GRIN2AQ12879 1464 aa27.1■■□□□ 1.93
NKX6-1-201ENST00000295886 RPRD2Q5VT52 1461 aaKnown RBP27.1■■□□□ 1.93
NKX6-1-201ENST00000295886 RAPGEF6Q8TEU7 1601 aa27.09■■□□□ 1.93
NKX6-1-201ENST00000295886 CFDP1Q9UEE9 299 aaPredicted RBP27.08■■□□□ 1.93
NKX6-1-201ENST00000295886 FAM9BQ8IZU0 186 aa27.08■■□□□ 1.93
NKX6-1-201ENST00000295886 CNGB1Q14028 1251 aaPredicted RBP27.07■■□□□ 1.92
NKX6-1-201ENST00000295886 NCOA1Q15788 1441 aa27.07■■□□□ 1.92
NKX6-1-201ENST00000295886 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
NKX6-1-201ENST00000295886 PLB1Q6P1J6 1458 aa27.06■■□□□ 1.92
NKX6-1-201ENST00000295886 PRKRIP1Q9H875 184 aaPredicted RBP27.05■■□□□ 1.92
NKX6-1-201ENST00000295886 CHMP7Q8WUX9 453 aaPredicted RBP27.05■■□□□ 1.92
NKX6-1-201ENST00000295886 ZNF326Q5BKZ1 582 aaKnown RBP27.04■■□□□ 1.92
NKX6-1-201ENST00000295886 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
NKX6-1-201ENST00000295886 MRS2Q9HD23 443 aa27.02■■□□□ 1.92
NKX6-1-201ENST00000295886 RBM19Q9Y4C8 960 aaKnown RBP27.02■■□□□ 1.92
NKX6-1-201ENST00000295886 KIF7Q2M1P5 1343 aa27.01■■□□□ 1.92
NKX6-1-201ENST00000295886 CAMSAP2Q08AD1 1489 aa27.01■■□□□ 1.91
NKX6-1-201ENST00000295886 TROQ12816 1431 aaPredicted RBP27■■□□□ 1.91
NKX6-1-201ENST00000295886 POLR3GLQ9BT43 218 aa26.99■■□□□ 1.91
NKX6-1-201ENST00000295886 PZPP20742 1482 aa26.98■■□□□ 1.91
NKX6-1-201ENST00000295886 KIF14Q15058 1648 aa26.96■■□□□ 1.91
NKX6-1-201ENST00000295886 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.91
NKX6-1-201ENST00000295886 SPATA31E1Q6ZUB1 1445 aa26.94■■□□□ 1.9
NKX6-1-201ENST00000295886 PKD2Q13563 968 aa26.93■■□□□ 1.9
NKX6-1-201ENST00000295886 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
NKX6-1-201ENST00000295886 ERCC6Q03468 1493 aa26.91■■□□□ 1.9
NKX6-1-201ENST00000295886 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
NKX6-1-201ENST00000295886 SENP3-EIF4A1A0A087X0R7 540 aa26.85■■□□□ 1.89
NKX6-1-201ENST00000295886 KIAA1107Q9UPP5 1409 aa26.84■■□□□ 1.89
NKX6-1-201ENST00000295886 SYNJ2O15056 1496 aa26.84■■□□□ 1.89
NKX6-1-201ENST00000295886 MAGI1Q96QZ7 1491 aaPredicted RBP26.83■■□□□ 1.89
NKX6-1-201ENST00000295886 USP47Q96K76 1375 aa26.82■■□□□ 1.88
NKX6-1-201ENST00000295886 ANKRD30AQ9BXX3 1397 aa26.82■■□□□ 1.88
NKX6-1-201ENST00000295886 ITSN2Q9NZM3 1697 aa26.82■■□□□ 1.88
NKX6-1-201ENST00000295886 ANKRD50Q9ULJ7 1429 aa26.81■■□□□ 1.88
NKX6-1-201ENST00000295886 PLEKHD1A6NEE1 506 aa26.8■■□□□ 1.88
NKX6-1-201ENST00000295886 BCL11AQ9H165 835 aa26.8■■□□□ 1.88
NKX6-1-201ENST00000295886 CARMIL2Q6F5E8 1435 aa26.8■■□□□ 1.88
NKX6-1-201ENST00000295886 ADGBQ8N7X0 1667 aa26.79■■□□□ 1.88
NKX6-1-201ENST00000295886 ZBED9Q6R2W3 1325 aa26.78■■□□□ 1.88
NKX6-1-201ENST00000295886 NUP155O75694 1391 aa26.78■■□□□ 1.88
NKX6-1-201ENST00000295886 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
NKX6-1-201ENST00000295886 ADGRL2O95490 1459 aa26.77■■□□□ 1.88
NKX6-1-201ENST00000295886 KDM2AQ9Y2K7 1162 aa26.76■■□□□ 1.87
NKX6-1-201ENST00000295886 BCORL1Q5H9F3 1711 aa26.75■■□□□ 1.87
NKX6-1-201ENST00000295886 DHX29Q7Z478 1369 aaKnown RBP26.74■■□□□ 1.87
NKX6-1-201ENST00000295886 CROCC2H7BZ55 1655 aa26.74■■□□□ 1.87
NKX6-1-201ENST00000295886 HNRNPMP52272 730 aaKnown RBP eCLIP26.74■■□□□ 1.87
NKX6-1-201ENST00000295886 ADCY10Q96PN6 1610 aa26.73■■□□□ 1.87
NKX6-1-201ENST00000295886 B4GALNT3Q6L9W6 998 aa26.72■■□□□ 1.87
NKX6-1-201ENST00000295886 C9orf84Q5VXU9 1444 aa26.71■■□□□ 1.87
NKX6-1-201ENST00000295886 ATP10BO94823 1461 aa26.71■■□□□ 1.87
NKX6-1-201ENST00000295886 POLR1AO95602 1720 aaPredicted RBP26.71■■□□□ 1.87
NKX6-1-201ENST00000295886 NUP160Q12769 1436 aa26.71■■□□□ 1.87
NKX6-1-201ENST00000295886 PPP4R2Q9NY27 417 aa26.7■■□□□ 1.86
NKX6-1-201ENST00000295886 TSPY4P0CV99 314 aa26.69■■□□□ 1.86
NKX6-1-201ENST00000295886 TSPY10P0CW01 314 aa26.69■■□□□ 1.86
NKX6-1-201ENST00000295886 CARD11Q9BXL7 1154 aa26.69■■□□□ 1.86
NKX6-1-201ENST00000295886 CDC42BPAQ5VT25 1732 aa26.68■■□□□ 1.86
NKX6-1-201ENST00000295886 MSH5O43196 834 aa26.67■■□□□ 1.86
NKX6-1-201ENST00000295886 ABCC10Q5T3U5 1492 aa26.66■■□□□ 1.86
NKX6-1-201ENST00000295886 DCAF11Q8TEB1 546 aa26.64■■□□□ 1.86
NKX6-1-201ENST00000295886 KDM5CP41229 1560 aa26.64■■□□□ 1.86
NKX6-1-201ENST00000295886 ABCA8O94911 1581 aa26.63■■□□□ 1.85
NKX6-1-201ENST00000295886 KIF15Q9NS87 1388 aa26.63■■□□□ 1.85
NKX6-1-201ENST00000295886 ST20-MTHFSA0A0A6YYL1 179 aa26.62■■□□□ 1.85
NKX6-1-201ENST00000295886 ERICH6BQ5W0A0 696 aa26.6■■□□□ 1.85
NKX6-1-201ENST00000295886 RALGAPBQ86X10 1494 aa26.56■■□□□ 1.84
NKX6-1-201ENST00000295886 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
NKX6-1-201ENST00000295886 UHRF1BP1Q6BDS2 1440 aa26.55■■□□□ 1.84
NKX6-1-201ENST00000295886 TMC1Q8TDI8 760 aa26.55■■□□□ 1.84
NKX6-1-201ENST00000295886 RGL3Q3MIN7 710 aa26.53■■□□□ 1.84
NKX6-1-201ENST00000295886 PNISRQ8TF01 805 aaKnown RBP26.52■■□□□ 1.84
NKX6-1-201ENST00000295886 PTPRGP23470 1445 aa26.51■■□□□ 1.84
NKX6-1-201ENST00000295886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.51■■□□□ 1.83
NKX6-1-201ENST00000295886 ARID4BQ4LE39 1312 aaPredicted RBP26.5■■□□□ 1.83
NKX6-1-201ENST00000295886 NUDCQ9Y266 331 aa26.5■■□□□ 1.83
NKX6-1-201ENST00000295886 SMG6Q86US8 1419 aaKnown RBP26.49■■□□□ 1.83
NKX6-1-201ENST00000295886 ROCK2O75116 1388 aaKnown RBP26.48■■□□□ 1.83
NKX6-1-201ENST00000295886 FANCIQ9NVI1 1328 aa26.46■■□□□ 1.83
NKX6-1-201ENST00000295886 ARHGEF12Q9NZN5 1544 aa26.46■■□□□ 1.83
NKX6-1-201ENST00000295886 KDM5DQ9BY66 1539 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms