RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 CALRP27797 417 aaKnown RBP20.33■□□□□ 0.85
CRAMP1-201ENST00000293925 SOX12O15370 315 aa20.31■□□□□ 0.84
CRAMP1-201ENST00000293925 PATL2C9JE40 543 aaKnown RBP20.31■□□□□ 0.84
CRAMP1-201ENST00000293925 ANO8Q9HCE9 1232 aaPredicted RBP20.3■□□□□ 0.84
CRAMP1-201ENST00000293925 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
CRAMP1-201ENST00000293925 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
CRAMP1-201ENST00000293925 CEP89Q96ST8 783 aa20.27■□□□□ 0.84
CRAMP1-201ENST00000293925 TPM3P06753 285 aa20.27■□□□□ 0.83
CRAMP1-201ENST00000293925 CCDC34Q96HJ3 373 aa20.26■□□□□ 0.83
CRAMP1-201ENST00000293925 CLIP1P30622 1438 aa20.26■□□□□ 0.83
CRAMP1-201ENST00000293925 MFAP1P55081 439 aaKnown RBP20.25■□□□□ 0.83
CRAMP1-201ENST00000293925 RASSF8Q8NHQ8 419 aa20.25■□□□□ 0.83
CRAMP1-201ENST00000293925 FOXD4L1Q9NU39 408 aa20.25■□□□□ 0.83
CRAMP1-201ENST00000293925 RTF1Q92541 710 aaKnown RBP20.24■□□□□ 0.83
CRAMP1-201ENST00000293925 CSPP1Q1MSJ5 1256 aa20.23■□□□□ 0.83
CRAMP1-201ENST00000293925 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
CRAMP1-201ENST00000293925 CCAR2Q8N163 923 aaKnown RBP20.23■□□□□ 0.83
CRAMP1-201ENST00000293925 SIN3AQ96ST3 1273 aa20.22■□□□□ 0.83
CRAMP1-201ENST00000293925 IPO8O15397 1037 aaKnown RBP20.22■□□□□ 0.83
CRAMP1-201ENST00000293925 ZNF771Q7L3S4 317 aaPredicted RBP20.22■□□□□ 0.83
CRAMP1-201ENST00000293925 ITPRIPQ8IWB1 547 aa20.22■□□□□ 0.83
CRAMP1-201ENST00000293925 PHF14O94880 888 aa20.21■□□□□ 0.83
CRAMP1-201ENST00000293925 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
CRAMP1-201ENST00000293925 FBXO3Q9UK99 471 aa20.21■□□□□ 0.83
CRAMP1-201ENST00000293925 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
CRAMP1-201ENST00000293925 TRIM6-TRIM34B2RNG4 842 aa20.2■□□□□ 0.82
CRAMP1-201ENST00000293925 PES1O00541 588 aaKnown RBP20.19■□□□□ 0.82
CRAMP1-201ENST00000293925 TMF1P82094 1093 aa20.19■□□□□ 0.82
CRAMP1-201ENST00000293925 RSPH6AQ9H0K4 717 aa20.19■□□□□ 0.82
CRAMP1-201ENST00000293925 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
CRAMP1-201ENST00000293925 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
CRAMP1-201ENST00000293925 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
CRAMP1-201ENST00000293925 PLEKHD1A6NEE1 506 aa20.18■□□□□ 0.82
CRAMP1-201ENST00000293925 FOXD4L5Q5VV16 416 aaPredicted RBP20.17■□□□□ 0.82
CRAMP1-201ENST00000293925 FOXD4L4Q8WXT5 416 aaPredicted RBP20.17■□□□□ 0.82
CRAMP1-201ENST00000293925 MORC1Q86VD1 984 aa20.17■□□□□ 0.82
CRAMP1-201ENST00000293925 IPO9Q96P70 1041 aaKnown RBP20.17■□□□□ 0.82
CRAMP1-201ENST00000293925 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
CRAMP1-201ENST00000293925 RCAN3Q9UKA8 241 aa20.15■□□□□ 0.82
CRAMP1-201ENST00000293925 SRPK2P78362 688 aaKnown RBP20.14■□□□□ 0.82
CRAMP1-201ENST00000293925 ZNF330Q9Y3S2 320 aaPredicted RBP20.14■□□□□ 0.82
CRAMP1-201ENST00000293925 GORABQ5T7V8 394 aa20.14■□□□□ 0.81
CRAMP1-201ENST00000293925 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
CRAMP1-201ENST00000293925 GPATCH3Q96I76 525 aa20.13■□□□□ 0.81
CRAMP1-201ENST00000293925 GPS2Q13227 327 aa20.12■□□□□ 0.81
CRAMP1-201ENST00000293925 TPD52L1Q16890 204 aaPredicted RBP20.12■□□□□ 0.81
CRAMP1-201ENST00000293925 TSR1Q2NL82 804 aaKnown RBP20.12■□□□□ 0.81
CRAMP1-201ENST00000293925 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
CRAMP1-201ENST00000293925 SF3A1Q15459 793 aaKnown RBP20.11■□□□□ 0.81
CRAMP1-201ENST00000293925 DCAF11Q8TEB1 546 aa20.1■□□□□ 0.81
CRAMP1-201ENST00000293925 PMFBP1Q8TBY8 1022 aa20.1■□□□□ 0.81
CRAMP1-201ENST00000293925 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
CRAMP1-201ENST00000293925 SAFB2Q14151 953 aaKnown RBP eCLIP20.09■□□□□ 0.81
CRAMP1-201ENST00000293925 ZNF592Q92610 1267 aa20.09■□□□□ 0.81
CRAMP1-201ENST00000293925 GOLGA6L19H0YKK7 550 aa20.08■□□□□ 0.8
CRAMP1-201ENST00000293925 CCDC70Q6NSX1 233 aa20.07■□□□□ 0.8
CRAMP1-201ENST00000293925 VPS53Q5VIR6 699 aa20.07■□□□□ 0.8
CRAMP1-201ENST00000293925 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
CRAMP1-201ENST00000293925 RRP12Q5JTH9 1297 aaKnown RBP20.06■□□□□ 0.8
CRAMP1-201ENST00000293925 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
CRAMP1-201ENST00000293925 ST18O60284 1047 aa20.05■□□□□ 0.8
CRAMP1-201ENST00000293925 MARCH6O60337 910 aa20.05■□□□□ 0.8
CRAMP1-201ENST00000293925 TAF7LQ5H9L4 462 aa20.05■□□□□ 0.8
CRAMP1-201ENST00000293925 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
CRAMP1-201ENST00000293925 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
CRAMP1-201ENST00000293925 FOXD4L6Q3SYB3 417 aaPredicted RBP20.04■□□□□ 0.8
CRAMP1-201ENST00000293925 FOXD4L3Q6VB84 417 aaPredicted RBP20.04■□□□□ 0.8
CRAMP1-201ENST00000293925 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
CRAMP1-201ENST00000293925 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
CRAMP1-201ENST00000293925 TEX35Q5T0J7 233 aa20.02■□□□□ 0.8
CRAMP1-201ENST00000293925 H3BQV1 296 aa20.02■□□□□ 0.8
CRAMP1-201ENST00000293925 IFFO2Q5TF58 517 aa20.02■□□□□ 0.8
CRAMP1-201ENST00000293925 KTN1Q86UP2 1357 aaKnown RBP20.01■□□□□ 0.79
CRAMP1-201ENST00000293925 BECN2A8MW95 431 aa20.01■□□□□ 0.79
CRAMP1-201ENST00000293925 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
CRAMP1-201ENST00000293925 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
CRAMP1-201ENST00000293925 TPM1P09493 284 aa20.01■□□□□ 0.79
CRAMP1-201ENST00000293925 TOMM22Q9NS69 142 aa20.01■□□□□ 0.79
CRAMP1-201ENST00000293925 TMX4Q9H1E5 349 aaPredicted RBP20■□□□□ 0.79
CRAMP1-201ENST00000293925 FAM13BQ9NYF5 915 aa20■□□□□ 0.79
CRAMP1-201ENST00000293925 DDX49Q9Y6V7 483 aaKnown RBP20■□□□□ 0.79
CRAMP1-201ENST00000293925 SMC4Q9NTJ3 1288 aa20■□□□□ 0.79
CRAMP1-201ENST00000293925 CEP162Q5TB80 1403 aa20■□□□□ 0.79
CRAMP1-201ENST00000293925 KIF3AQ9Y496 699 aa19.98■□□□□ 0.79
CRAMP1-201ENST00000293925 SLC4A10Q6U841 1118 aa19.98■□□□□ 0.79
CRAMP1-201ENST00000293925 TPM2P07951 284 aa19.97■□□□□ 0.79
CRAMP1-201ENST00000293925 HMMRO75330 724 aa19.97■□□□□ 0.79
CRAMP1-201ENST00000293925 STK31Q9BXU1 1019 aa19.96■□□□□ 0.79
CRAMP1-201ENST00000293925 GSE1Q14687 1217 aa19.96■□□□□ 0.79
CRAMP1-201ENST00000293925 PAK3O75914 559 aaPredicted RBP19.95■□□□□ 0.78
CRAMP1-201ENST00000293925 CLUAP1Q96AJ1 413 aa19.95■□□□□ 0.78
CRAMP1-201ENST00000293925 FAM184AQ8NB25 1140 aa19.94■□□□□ 0.78
CRAMP1-201ENST00000293925 STK26Q9P289 416 aa19.94■□□□□ 0.78
CRAMP1-201ENST00000293925 GOLGA3Q08378 1498 aa19.94■□□□□ 0.78
CRAMP1-201ENST00000293925 G3V3G9 751 aa19.93■□□□□ 0.78
CRAMP1-201ENST00000293925 DCAF8Q5TAQ9 597 aa19.93■□□□□ 0.78
CRAMP1-201ENST00000293925 PCMTD1Q96MG8 357 aaPredicted RBP19.93■□□□□ 0.78
CRAMP1-201ENST00000293925 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
CRAMP1-201ENST00000293925 HOMER1Q86YM7 354 aa19.92■□□□□ 0.78
CRAMP1-201ENST00000293925 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms