RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
PCDHA13-201ENST00000289272 HSCBQ8IWL3 235 aa22.46■■□□□ 1.19
PCDHA13-201ENST00000289272 CHAF1AQ13111 956 aaPredicted RBP22.45■■□□□ 1.18
PCDHA13-201ENST00000289272 PKD2Q13563 968 aa22.43■■□□□ 1.18
PCDHA13-201ENST00000289272 TMF1P82094 1093 aa22.42■■□□□ 1.18
PCDHA13-201ENST00000289272 FOXD1Q16676 465 aa22.42■■□□□ 1.18
PCDHA13-201ENST00000289272 HSP90AB1P08238 724 aaKnown RBP22.41■■□□□ 1.18
PCDHA13-201ENST00000289272 CC2D1BQ5T0F9 858 aaKnown RBP22.4■■□□□ 1.18
PCDHA13-201ENST00000289272 FTSJ3Q8IY81 847 aaKnown RBP22.4■■□□□ 1.18
PCDHA13-201ENST00000289272 GOLGA6L6A8MZA4 724 aa22.39■■□□□ 1.18
PCDHA13-201ENST00000289272 POGKQ9P215 609 aa22.39■■□□□ 1.17
PCDHA13-201ENST00000289272 NUDCQ9Y266 331 aa22.38■■□□□ 1.17
PCDHA13-201ENST00000289272 GBP4Q96PP9 640 aa22.38■■□□□ 1.17
PCDHA13-201ENST00000289272 RGS3P49796 1198 aa22.37■■□□□ 1.17
PCDHA13-201ENST00000289272 PDE3BQ13370 1112 aa22.36■■□□□ 1.17
PCDHA13-201ENST00000289272 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
PCDHA13-201ENST00000289272 NRDCO43847 1150 aa22.34■■□□□ 1.17
PCDHA13-201ENST00000289272 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
PCDHA13-201ENST00000289272 RALBP1Q15311 655 aa22.33■■□□□ 1.17
PCDHA13-201ENST00000289272 GOLGA6L3A6NEY3 463 aa22.32■■□□□ 1.16
PCDHA13-201ENST00000289272 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
PCDHA13-201ENST00000289272 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
PCDHA13-201ENST00000289272 ZRSR1Q15695 479 aaKnown RBP22.31■■□□□ 1.16
PCDHA13-201ENST00000289272 CCDC18Q5T9S5 1454 aa22.3■■□□□ 1.16
PCDHA13-201ENST00000289272 NUP155O75694 1391 aa22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 RCAN3Q9UKA8 241 aa22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 HAP1P54257 671 aaPredicted RBP22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 MAPK8IP3Q9UPT6 1336 aa22.28■■□□□ 1.16
PCDHA13-201ENST00000289272 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 KTN1Q86UP2 1357 aaKnown RBP22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 NEUROD2Q15784 382 aa22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 ROCK2O75116 1388 aaKnown RBP22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 KIF21BO75037 1637 aa22.26■■□□□ 1.15
PCDHA13-201ENST00000289272 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
PCDHA13-201ENST00000289272 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
PCDHA13-201ENST00000289272 IGF1RP08069 1367 aa22.24■■□□□ 1.15
PCDHA13-201ENST00000289272 GSE1Q14687 1217 aa22.24■■□□□ 1.15
PCDHA13-201ENST00000289272 HSP90AA2PQ14568 343 aaPredicted RBP22.22■■□□□ 1.15
PCDHA13-201ENST00000289272 KIAA2012Q0VF49 1180 aa22.2■■□□□ 1.14
PCDHA13-201ENST00000289272 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
PCDHA13-201ENST00000289272 FRAT1Q92837 279 aaPredicted RBP22.18■■□□□ 1.14
PCDHA13-201ENST00000289272 PMFBP1Q8TBY8 1022 aa22.17■■□□□ 1.14
PCDHA13-201ENST00000289272 ZBED9Q6R2W3 1325 aa22.17■■□□□ 1.14
PCDHA13-201ENST00000289272 SYAP1Q96A49 352 aaPredicted RBP22.17■■□□□ 1.14
PCDHA13-201ENST00000289272 TRHP20396 242 aaPredicted RBP22.16■■□□□ 1.14
PCDHA13-201ENST00000289272 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 DDX11L8A8MPP1 907 aa22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 RWDD1Q9H446 243 aaPredicted RBP22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 MCCP23508 829 aa22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
PCDHA13-201ENST00000289272 A0A0G2JS52 829 aa22.14■■□□□ 1.13
PCDHA13-201ENST00000289272 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
PCDHA13-201ENST00000289272 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
PCDHA13-201ENST00000289272 SKOR2Q2VWA4 1001 aaPredicted RBP22.1■■□□□ 1.13
PCDHA13-201ENST00000289272 GGT6Q6P531 493 aa22.1■■□□□ 1.13
PCDHA13-201ENST00000289272 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
PCDHA13-201ENST00000289272 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
PCDHA13-201ENST00000289272 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
PCDHA13-201ENST00000289272 HNRNPMP52272 730 aaKnown RBP eCLIP22.08■■□□□ 1.13
PCDHA13-201ENST00000289272 CENPQQ7L2Z9 268 aaPredicted RBP22.08■■□□□ 1.12
PCDHA13-201ENST00000289272 EIF3AQ14152 1382 aaKnown RBP22.08■■□□□ 1.12
PCDHA13-201ENST00000289272 LRRC9Q6ZRR7 1453 aa22.07■■□□□ 1.12
PCDHA13-201ENST00000289272 FGD6Q6ZV73 1430 aa22.06■■□□□ 1.12
PCDHA13-201ENST00000289272 IPO8O15397 1037 aaKnown RBP22.06■■□□□ 1.12
PCDHA13-201ENST00000289272 PDE4AP27815 886 aa22.06■■□□□ 1.12
PCDHA13-201ENST00000289272 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
PCDHA13-201ENST00000289272 FAM161AQ3B820 660 aa22.05■■□□□ 1.12
PCDHA13-201ENST00000289272 SRPK2P78362 688 aaKnown RBP22.05■■□□□ 1.12
PCDHA13-201ENST00000289272 MLECQ14165 292 aa22.04■■□□□ 1.12
PCDHA13-201ENST00000289272 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
PCDHA13-201ENST00000289272 SPAG9O60271 1321 aaKnown RBP22.04■■□□□ 1.12
PCDHA13-201ENST00000289272 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
PCDHA13-201ENST00000289272 PRKRIP1Q9H875 184 aaPredicted RBP22.02■■□□□ 1.12
PCDHA13-201ENST00000289272 CUX1P39880 1505 aa22.02■■□□□ 1.12
PCDHA13-201ENST00000289272 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
PCDHA13-201ENST00000289272 LMOD2Q6P5Q4 547 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 MYOM3Q5VTT5 1437 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 PLCB2Q00722 1185 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 PLEKHG5O94827 1062 aa22■■□□□ 1.11
PCDHA13-201ENST00000289272 GOLGA6L4A6NEF3 574 aa22■■□□□ 1.11
PCDHA13-201ENST00000289272 UACAQ9BZF9 1416 aa21.99■■□□□ 1.11
PCDHA13-201ENST00000289272 PHF14O94880 888 aa21.99■■□□□ 1.11
PCDHA13-201ENST00000289272 PTPRGP23470 1445 aa21.97■■□□□ 1.11
PCDHA13-201ENST00000289272 CASKIN1Q8WXD9 1431 aa21.97■■□□□ 1.11
PCDHA13-201ENST00000289272 SLKQ9H2G2 1235 aaPredicted RBP21.97■■□□□ 1.11
PCDHA13-201ENST00000289272 CSPP1Q1MSJ5 1256 aa21.96■■□□□ 1.11
PCDHA13-201ENST00000289272 CALD1Q05682 793 aaKnown RBP21.96■■□□□ 1.11
PCDHA13-201ENST00000289272 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
PCDHA13-201ENST00000289272 ST20-MTHFSA0A0A6YYL1 179 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 KIF3BO15066 747 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 MAP7D2Q96T17 732 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 MTERF4Q7Z6M4 381 aaKnown RBP21.94■■□□□ 1.1
PCDHA13-201ENST00000289272 CFTRP13569 1480 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms