RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 ILDR1Q86SU0 546 aaPredicted RBP24.93■■□□□ 1.58
PDE6D-201ENST00000287600 RIMS1Q86UR5 1692 aaKnown RBP24.91■■□□□ 1.58
PDE6D-201ENST00000287600 PLCH2O75038 1416 aa24.91■■□□□ 1.58
PDE6D-201ENST00000287600 KIF14Q15058 1648 aa24.9■■□□□ 1.58
PDE6D-201ENST00000287600 CDK11AQ9UQ88 783 aaPredicted RBP24.88■■□□□ 1.57
PDE6D-201ENST00000287600 POGZQ7Z3K3 1410 aa24.87■■□□□ 1.57
PDE6D-201ENST00000287600 YEATS2Q9ULM3 1422 aa24.87■■□□□ 1.57
PDE6D-201ENST00000287600 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
PDE6D-201ENST00000287600 MAGI2Q86UL8 1455 aa24.87■■□□□ 1.57
PDE6D-201ENST00000287600 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
PDE6D-201ENST00000287600 SIGLEC1Q9BZZ2 1709 aa24.85■■□□□ 1.57
PDE6D-201ENST00000287600 CLIP1P30622 1438 aa24.84■■□□□ 1.57
PDE6D-201ENST00000287600 TROQ12816 1431 aaPredicted RBP24.84■■□□□ 1.57
PDE6D-201ENST00000287600 PCF11O94913 1555 aaKnown RBP24.83■■□□□ 1.57
PDE6D-201ENST00000287600 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
PDE6D-201ENST00000287600 EFCAB2Q5VUJ9 269 aa24.79■■□□□ 1.56
PDE6D-201ENST00000287600 FER1L4A9Z1Z3 1794 aa24.78■■□□□ 1.56
PDE6D-201ENST00000287600 PIAS4Q8N2W9 510 aaPredicted RBP24.78■■□□□ 1.56
PDE6D-201ENST00000287600 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
PDE6D-201ENST00000287600 CCDC18Q5T9S5 1454 aa24.75■■□□□ 1.55
PDE6D-201ENST00000287600 ZNF518AQ6AHZ1 1483 aa24.75■■□□□ 1.55
PDE6D-201ENST00000287600 MLECQ14165 292 aa24.74■■□□□ 1.55
PDE6D-201ENST00000287600 C9orf84Q5VXU9 1444 aa24.74■■□□□ 1.55
PDE6D-201ENST00000287600 ATP10AO60312 1499 aa24.73■■□□□ 1.55
PDE6D-201ENST00000287600 CASKIN1Q8WXD9 1431 aa24.73■■□□□ 1.55
PDE6D-201ENST00000287600 CDC42BPBQ9Y5S2 1711 aa24.72■■□□□ 1.55
PDE6D-201ENST00000287600 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
PDE6D-201ENST00000287600 KDM5CP41229 1560 aa24.71■■□□□ 1.55
PDE6D-201ENST00000287600 ARHGEF12Q9NZN5 1544 aa24.67■■□□□ 1.54
PDE6D-201ENST00000287600 FYCO1Q9BQS8 1478 aa24.66■■□□□ 1.54
PDE6D-201ENST00000287600 MYT1LQ9UL68 1186 aa24.65■■□□□ 1.54
PDE6D-201ENST00000287600 DIP2CQ9Y2E4 1556 aa24.64■■□□□ 1.54
PDE6D-201ENST00000287600 AFAP1Q8N556 730 aa24.64■■□□□ 1.54
PDE6D-201ENST00000287600 ABCC1P33527 1531 aa24.64■■□□□ 1.53
PDE6D-201ENST00000287600 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
PDE6D-201ENST00000287600 CDC42BPAQ5VT25 1732 aa24.62■■□□□ 1.53
PDE6D-201ENST00000287600 ABCA6Q8N139 1617 aa24.61■■□□□ 1.53
PDE6D-201ENST00000287600 HSPA2P54652 639 aa24.6■■□□□ 1.53
PDE6D-201ENST00000287600 REREQ9P2R6 1566 aa24.59■■□□□ 1.53
PDE6D-201ENST00000287600 MLH3Q9UHC1 1453 aa24.58■■□□□ 1.52
PDE6D-201ENST00000287600 PREX1Q8TCU6 1659 aa24.57■■□□□ 1.52
PDE6D-201ENST00000287600 TRAPPC8Q9Y2L5 1435 aa24.56■■□□□ 1.52
PDE6D-201ENST00000287600 FBXO41Q8TF61 875 aa24.55■■□□□ 1.52
PDE6D-201ENST00000287600 KIDINS220Q9ULH0 1771 aa24.51■■□□□ 1.51
PDE6D-201ENST00000287600 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
PDE6D-201ENST00000287600 CEBPAP49715 358 aaPredicted RBP24.49■■□□□ 1.51
PDE6D-201ENST00000287600 AGLP35573 1532 aa24.49■■□□□ 1.51
PDE6D-201ENST00000287600 SYCP2Q9BX26 1530 aa24.49■■□□□ 1.51
PDE6D-201ENST00000287600 ZNF777Q9ULD5 760 aaPredicted RBP24.48■■□□□ 1.51
PDE6D-201ENST00000287600 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
PDE6D-201ENST00000287600 GPATCH8Q9UKJ3 1502 aaKnown RBP24.46■■□□□ 1.51
PDE6D-201ENST00000287600 C3P01024 1663 aa24.46■■□□□ 1.51
PDE6D-201ENST00000287600 UHRF1BP1Q6BDS2 1440 aa24.44■■□□□ 1.5
PDE6D-201ENST00000287600 ESF1Q9H501 851 aaKnown RBP24.42■■□□□ 1.5
PDE6D-201ENST00000287600 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
PDE6D-201ENST00000287600 CCNB3Q8WWL7 1395 aa24.41■■□□□ 1.5
PDE6D-201ENST00000287600 PLEKHH2Q8IVE3 1493 aa24.39■■□□□ 1.5
PDE6D-201ENST00000287600 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
PDE6D-201ENST00000287600 SETD1BQ9UPS6 1966 aaKnown RBP24.38■■□□□ 1.49
PDE6D-201ENST00000287600 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
PDE6D-201ENST00000287600 EHBP1L1Q8N3D4 1523 aa24.37■■□□□ 1.49
PDE6D-201ENST00000287600 CFDP1Q9UEE9 299 aaPredicted RBP24.37■■□□□ 1.49
PDE6D-201ENST00000287600 SUPT6HQ7KZ85 1726 aaKnown RBP24.37■■□□□ 1.49
PDE6D-201ENST00000287600 INO80Q9ULG1 1556 aaPredicted RBP24.37■■□□□ 1.49
PDE6D-201ENST00000287600 CNTLNQ9NXG0 1405 aa24.36■■□□□ 1.49
PDE6D-201ENST00000287600 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.49
PDE6D-201ENST00000287600 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
PDE6D-201ENST00000287600 STRCQ7RTU9 1775 aa24.35■■□□□ 1.49
PDE6D-201ENST00000287600 MSH5O43196 834 aa24.35■■□□□ 1.49
PDE6D-201ENST00000287600 TIAM1Q13009 1591 aa24.34■■□□□ 1.49
PDE6D-201ENST00000287600 CEP162Q5TB80 1403 aa24.33■■□□□ 1.49
PDE6D-201ENST00000287600 MROH2AA6NES4 1674 aa24.33■■□□□ 1.49
PDE6D-201ENST00000287600 PLXNC1O60486 1568 aa24.31■■□□□ 1.48
PDE6D-201ENST00000287600 CERKQ8TCT0 537 aa24.3■■□□□ 1.48
PDE6D-201ENST00000287600 A2MP01023 1474 aa24.29■■□□□ 1.48
PDE6D-201ENST00000287600 DMRT2Q9Y5R5 561 aa24.28■■□□□ 1.48
PDE6D-201ENST00000287600 CLTCQ00610 1675 aaKnown RBP24.27■■□□□ 1.48
PDE6D-201ENST00000287600 ADGBQ8N7X0 1667 aa24.27■■□□□ 1.48
PDE6D-201ENST00000287600 NPATQ14207 1427 aa24.23■■□□□ 1.47
PDE6D-201ENST00000287600 ZNF644Q9H582 1327 aaPredicted RBP24.22■■□□□ 1.47
PDE6D-201ENST00000287600 ZMYM3Q14202 1370 aa24.21■■□□□ 1.47
PDE6D-201ENST00000287600 MBD5Q9P267 1494 aa24.19■■□□□ 1.46
PDE6D-201ENST00000287600 PTPRTO14522 1441 aa24.19■■□□□ 1.46
PDE6D-201ENST00000287600 MYO3AQ8NEV4 1616 aa24.18■■□□□ 1.46
PDE6D-201ENST00000287600 NCOA2Q15596 1464 aa24.18■■□□□ 1.46
PDE6D-201ENST00000287600 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
PDE6D-201ENST00000287600 GGT6Q6P531 493 aa24.17■■□□□ 1.46
PDE6D-201ENST00000287600 CAMSAP1Q5T5Y3 1602 aa24.17■■□□□ 1.46
PDE6D-201ENST00000287600 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
PDE6D-201ENST00000287600 ZNF142P52746 1687 aaPredicted RBP24.15■■□□□ 1.46
PDE6D-201ENST00000287600 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
PDE6D-201ENST00000287600 CCDC141Q6ZP82 1450 aa24.14■■□□□ 1.46
PDE6D-201ENST00000287600 PTPRKQ15262 1439 aa24.11■■□□□ 1.45
PDE6D-201ENST00000287600 CEP170BQ9Y4F5 1589 aaPredicted RBP24.11■■□□□ 1.45
PDE6D-201ENST00000287600 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.45
PDE6D-201ENST00000287600 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.44
PDE6D-201ENST00000287600 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
PDE6D-201ENST00000287600 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
PDE6D-201ENST00000287600 PLA2R1Q13018 1463 aa24.05■■□□□ 1.44
PDE6D-201ENST00000287600 LRRC9Q6ZRR7 1453 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms