RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-201ENST00000281142 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
SCLT1-201ENST00000281142 MTUS2Q5JR59 1369 aa16.02■□□□□ 0.16
SCLT1-201ENST00000281142 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.15
SCLT1-201ENST00000281142 NEFLP07196 543 aa16.01■□□□□ 0.15
SCLT1-201ENST00000281142 ASXL2Q76L83 1435 aa16.01■□□□□ 0.15
SCLT1-201ENST00000281142 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
SCLT1-201ENST00000281142 KIF14Q15058 1648 aa16■□□□□ 0.15
SCLT1-201ENST00000281142 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
SCLT1-201ENST00000281142 SETD5Q9C0A6 1442 aa16■□□□□ 0.15
SCLT1-201ENST00000281142 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
SCLT1-201ENST00000281142 FAM50AQ14320 339 aaKnown RBP15.99■□□□□ 0.15
SCLT1-201ENST00000281142 MSH5O43196 834 aa15.99■□□□□ 0.15
SCLT1-201ENST00000281142 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
SCLT1-201ENST00000281142 SUPT6HQ7KZ85 1726 aaKnown RBP15.98■□□□□ 0.15
SCLT1-201ENST00000281142 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
SCLT1-201ENST00000281142 NCOA2Q15596 1464 aa15.95■□□□□ 0.14
SCLT1-201ENST00000281142 IRX6P78412 446 aaPredicted RBP15.94■□□□□ 0.14
SCLT1-201ENST00000281142 ANP32CO43423 234 aa15.93■□□□□ 0.14
SCLT1-201ENST00000281142 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
SCLT1-201ENST00000281142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.92■□□□□ 0.147e-7■■□□□ 14.3
SCLT1-201ENST00000281142 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
SCLT1-201ENST00000281142 CCER2I3L3R5 266 aa15.9■□□□□ 0.14
SCLT1-201ENST00000281142 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
SCLT1-201ENST00000281142 DIP2BQ9P265 1576 aa15.88■□□□□ 0.13
SCLT1-201ENST00000281142 ABCA9Q8IUA7 1624 aa15.88■□□□□ 0.13
SCLT1-201ENST00000281142 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
SCLT1-201ENST00000281142 MYO5CQ9NQX4 1742 aa15.86■□□□□ 0.13
SCLT1-201ENST00000281142 CDC42BPBQ9Y5S2 1711 aa15.85■□□□□ 0.13
SCLT1-201ENST00000281142 GPATCH8Q9UKJ3 1502 aaKnown RBP15.85■□□□□ 0.13
SCLT1-201ENST00000281142 ITSN2Q9NZM3 1697 aa15.84■□□□□ 0.13
SCLT1-201ENST00000281142 MYOM3Q5VTT5 1437 aa15.84■□□□□ 0.13
SCLT1-201ENST00000281142 PREX2Q70Z35 1606 aa15.84■□□□□ 0.13
SCLT1-201ENST00000281142 GLI2P10070 1586 aa15.83■□□□□ 0.13
SCLT1-201ENST00000281142 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.12
SCLT1-201ENST00000281142 HNRNPUQ00839 825 aaKnown RBP eCLIP15.82■□□□□ 0.12
SCLT1-201ENST00000281142 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
SCLT1-201ENST00000281142 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
SCLT1-201ENST00000281142 PLCH2O75038 1416 aa15.79■□□□□ 0.12
SCLT1-201ENST00000281142 TSPOAP1O95153 1857 aa15.79■□□□□ 0.12
SCLT1-201ENST00000281142 CD109Q6YHK3 1445 aa15.79■□□□□ 0.12
SCLT1-201ENST00000281142 PTPN23Q9H3S7 1636 aa15.78■□□□□ 0.12
SCLT1-201ENST00000281142 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
SCLT1-201ENST00000281142 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
SCLT1-201ENST00000281142 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
SCLT1-201ENST00000281142 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-201ENST00000281142 MIA2Q96PC5 1412 aa15.77■□□□□ 0.11
SCLT1-201ENST00000281142 PPRC1Q5VV67 1664 aaKnown RBP15.77■□□□□ 0.11
SCLT1-201ENST00000281142 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-201ENST00000281142 ARAP3Q8WWN8 1544 aa15.76■□□□□ 0.11
SCLT1-201ENST00000281142 SAMD9LQ8IVG5 1584 aa15.76■□□□□ 0.11
SCLT1-201ENST00000281142 ZNF777Q9ULD5 760 aaPredicted RBP15.74■□□□□ 0.11
SCLT1-201ENST00000281142 CAMSAP2Q08AD1 1489 aa15.74■□□□□ 0.11
SCLT1-201ENST00000281142 FANCIQ9NVI1 1328 aa15.74■□□□□ 0.11
SCLT1-201ENST00000281142 TCOF1Q13428 1488 aaKnown RBP15.73■□□□□ 0.11
SCLT1-201ENST00000281142 FANCAO15360 1455 aa15.73■□□□□ 0.11
SCLT1-201ENST00000281142 CCDC184Q52MB2 194 aa15.72■□□□□ 0.11
SCLT1-201ENST00000281142 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-201ENST00000281142 ERICH6Q7L0X2 663 aa15.72■□□□□ 0.11
SCLT1-201ENST00000281142 EFCAB2Q5VUJ9 269 aa15.7■□□□□ 0.1
SCLT1-201ENST00000281142 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
SCLT1-201ENST00000281142 CFAP74Q9C0B2 1584 aa15.69■□□□□ 0.1
SCLT1-201ENST00000281142 ABCC1P33527 1531 aa15.69■□□□□ 0.1
SCLT1-201ENST00000281142 SYCP2Q9BX26 1530 aa15.69■□□□□ 0.1
SCLT1-201ENST00000281142 ARHGEF12Q9NZN5 1544 aa15.68■□□□□ 0.1
SCLT1-201ENST00000281142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCLT1-201ENST00000281142 AKNAQ7Z591 1439 aa15.67■□□□□ 0.1
SCLT1-201ENST00000281142 WASHC2AQ641Q2 1341 aa15.67■□□□□ 0.1
SCLT1-201ENST00000281142 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■■■■■ 29.5
SCLT1-201ENST00000281142 NEO1Q92859 1461 aa15.66■□□□□ 0.1
SCLT1-201ENST00000281142 DNMT1P26358 1616 aaKnown RBP15.66■□□□□ 0.1
SCLT1-201ENST00000281142 B4GALNT3Q6L9W6 998 aa15.66■□□□□ 0.1
SCLT1-201ENST00000281142 ADGRL1O94910 1474 aa15.66■□□□□ 0.1
SCLT1-201ENST00000281142 MBD5Q9P267 1494 aa15.66■□□□□ 0.1
SCLT1-201ENST00000281142 TEX14Q8IWB6 1497 aa15.64■□□□□ 0.1
SCLT1-201ENST00000281142 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
SCLT1-201ENST00000281142 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
SCLT1-201ENST00000281142 KIAA1107Q9UPP5 1409 aa15.64■□□□□ 0.09
SCLT1-201ENST00000281142 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
SCLT1-201ENST00000281142 ARHGEF5Q12774 1597 aa15.63■□□□□ 0.09
SCLT1-201ENST00000281142 DAPK1P53355 1430 aa15.63■□□□□ 0.09
SCLT1-201ENST00000281142 SCAPERQ9BY12 1400 aa15.63■□□□□ 0.09
SCLT1-201ENST00000281142 ABCC5O15440 1437 aa15.62■□□□□ 0.09
SCLT1-201ENST00000281142 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
SCLT1-201ENST00000281142 FAM9BQ8IZU0 186 aa15.61■□□□□ 0.09
SCLT1-201ENST00000281142 PPP4R2Q9NY27 417 aa15.61■□□□□ 0.09
SCLT1-201ENST00000281142 CCDC141Q6ZP82 1450 aa15.6■□□□□ 0.09
SCLT1-201ENST00000281142 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
SCLT1-201ENST00000281142 RICTORQ6R327 1708 aa15.59■□□□□ 0.09
SCLT1-201ENST00000281142 HFM1A2PYH4 1435 aa15.59■□□□□ 0.09
SCLT1-201ENST00000281142 AFAP1Q8N556 730 aa15.59■□□□□ 0.09
SCLT1-201ENST00000281142 C11orf95C9JLR9 678 aaPredicted RBP15.58■□□□□ 0.08
SCLT1-201ENST00000281142 NAIPQ13075 1403 aa15.58■□□□□ 0.08
SCLT1-201ENST00000281142 FRMPD1Q5SYB0 1578 aa15.57■□□□□ 0.08
SCLT1-201ENST00000281142 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
SCLT1-201ENST00000281142 COL17A1Q9UMD9 1497 aaPredicted RBP15.57■□□□□ 0.08
SCLT1-201ENST00000281142 CHIC2Q9UKJ5 165 aa15.57■□□□□ 0.08
SCLT1-201ENST00000281142 RAPGEF3O95398 923 aa15.57■□□□□ 0.08
SCLT1-201ENST00000281142 DENND4BO75064 1496 aaPredicted RBP15.56■□□□□ 0.08
SCLT1-201ENST00000281142 ANO8Q9HCE9 1232 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms