RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
CD164-201ENST00000275080 LRRIQ1Q96JM4 1722 aa12.51□□□□□ -0.41
CD164-201ENST00000275080 UACAQ9BZF9 1416 aa12.5□□□□□ -0.41
CD164-201ENST00000275080 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
CD164-201ENST00000275080 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
CD164-201ENST00000275080 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
CD164-201ENST00000275080 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
CD164-201ENST00000275080 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
CD164-201ENST00000275080 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
CD164-201ENST00000275080 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
CD164-201ENST00000275080 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
CD164-201ENST00000275080 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.42
CD164-201ENST00000275080 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
CD164-201ENST00000275080 CCDC136Q96JN2 1154 aa12.45□□□□□ -0.42
CD164-201ENST00000275080 RGL3Q3MIN7 710 aa12.44□□□□□ -0.42
CD164-201ENST00000275080 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
CD164-201ENST00000275080 TMC1Q8TDI8 760 aa12.43□□□□□ -0.42
CD164-201ENST00000275080 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
CD164-201ENST00000275080 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
CD164-201ENST00000275080 PKD2Q13563 968 aa12.41□□□□□ -0.42
CD164-201ENST00000275080 CCDC7Q96M83 1385 aa12.41□□□□□ -0.42
CD164-201ENST00000275080 TCOF1Q13428 1488 aaKnown RBP12.41□□□□□ -0.42
CD164-201ENST00000275080 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
CD164-201ENST00000275080 CFDP1Q9UEE9 299 aaPredicted RBP12.41□□□□□ -0.42
CD164-201ENST00000275080 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
CD164-201ENST00000275080 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
CD164-201ENST00000275080 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.42
CD164-201ENST00000275080 MAGI3Q5TCQ9 1506 aa12.4□□□□□ -0.42
CD164-201ENST00000275080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.39□□□□□ -0.435e-8■□□□□ 8.7
CD164-201ENST00000275080 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
CD164-201ENST00000275080 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
CD164-201ENST00000275080 KIAA0586Q9BVV6 1533 aa12.38□□□□□ -0.43
CD164-201ENST00000275080 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
CD164-201ENST00000275080 KDM6BO15054 1643 aa12.37□□□□□ -0.43
CD164-201ENST00000275080 DCAF11Q8TEB1 546 aa12.36□□□□□ -0.43
CD164-201ENST00000275080 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
CD164-201ENST00000275080 GCC2Q8IWJ2 1684 aa12.36□□□□□ -0.43
CD164-201ENST00000275080 CNTLNQ9NXG0 1405 aa12.36□□□□□ -0.43
CD164-201ENST00000275080 KIAA0556O60303 1618 aa12.35□□□□□ -0.43
CD164-201ENST00000275080 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
CD164-201ENST00000275080 PLIN1O60240 522 aa12.34□□□□□ -0.43
CD164-201ENST00000275080 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
CD164-201ENST00000275080 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
CD164-201ENST00000275080 GRIN2AQ12879 1464 aa12.34□□□□□ -0.43
CD164-201ENST00000275080 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.43
CD164-201ENST00000275080 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
CD164-201ENST00000275080 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
CD164-201ENST00000275080 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
CD164-201ENST00000275080 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
CD164-201ENST00000275080 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
CD164-201ENST00000275080 NOP58Q9Y2X3 529 aaKnown RBP12.31□□□□□ -0.44
CD164-201ENST00000275080 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.444e-8■■■□□ 18.4
CD164-201ENST00000275080 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
CD164-201ENST00000275080 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
CD164-201ENST00000275080 EXOC6Q8TAG9 804 aa12.3□□□□□ -0.44
CD164-201ENST00000275080 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
CD164-201ENST00000275080 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
CD164-201ENST00000275080 SYNJ2O15056 1496 aa12.3□□□□□ -0.44
CD164-201ENST00000275080 USP47Q96K76 1375 aa12.29□□□□□ -0.44
CD164-201ENST00000275080 ANKRD30BQ9BXX2 1392 aa12.29□□□□□ -0.44
CD164-201ENST00000275080 ANP32AP39687 249 aaKnown RBP12.29□□□□□ -0.44
CD164-201ENST00000275080 KDM5BQ9UGL1 1544 aa12.29□□□□□ -0.44
CD164-201ENST00000275080 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
CD164-201ENST00000275080 NUP153P49790 1475 aaKnown RBP12.28□□□□□ -0.44
CD164-201ENST00000275080 PRG4Q92954 1404 aaPredicted RBP12.27□□□□□ -0.44
CD164-201ENST00000275080 SENP3Q9H4L4 574 aaPredicted RBP12.27□□□□□ -0.44
CD164-201ENST00000275080 CEP170Q5SW79 1584 aa12.27□□□□□ -0.45
CD164-201ENST00000275080 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
CD164-201ENST00000275080 NUP155O75694 1391 aa12.27□□□□□ -0.45
CD164-201ENST00000275080 ROCK1Q13464 1354 aa12.27□□□□□ -0.45
CD164-201ENST00000275080 NUP160Q12769 1436 aa12.27□□□□□ -0.45
CD164-201ENST00000275080 NCOA1Q15788 1441 aa12.27□□□□□ -0.45
CD164-201ENST00000275080 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
CD164-201ENST00000275080 DNMT1P26358 1616 aaKnown RBP12.25□□□□□ -0.45
CD164-201ENST00000275080 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
CD164-201ENST00000275080 DAPK1P53355 1430 aa12.24□□□□□ -0.45
CD164-201ENST00000275080 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
CD164-201ENST00000275080 ABCC5O15440 1437 aa12.24□□□□□ -0.45
CD164-201ENST00000275080 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
CD164-201ENST00000275080 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
CD164-201ENST00000275080 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
CD164-201ENST00000275080 CARMIL2Q6F5E8 1435 aa12.22□□□□□ -0.45
CD164-201ENST00000275080 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
CD164-201ENST00000275080 TROQ12816 1431 aaPredicted RBP12.22□□□□□ -0.45
CD164-201ENST00000275080 PLEKHD1A6NEE1 506 aa12.21□□□□□ -0.46
CD164-201ENST00000275080 ADCY10Q96PN6 1610 aa12.2□□□□□ -0.46
CD164-201ENST00000275080 RCAN3Q9UKA8 241 aa12.2□□□□□ -0.46
CD164-201ENST00000275080 RPRD2Q5VT52 1461 aaKnown RBP12.19□□□□□ -0.46
CD164-201ENST00000275080 IPO9Q96P70 1041 aaKnown RBP12.18□□□□□ -0.46
CD164-201ENST00000275080 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
CD164-201ENST00000275080 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
CD164-201ENST00000275080 ERICH6BQ5W0A0 696 aa12.17□□□□□ -0.46
CD164-201ENST00000275080 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
CD164-201ENST00000275080 ROCK2O75116 1388 aaKnown RBP12.17□□□□□ -0.46
CD164-201ENST00000275080 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
CD164-201ENST00000275080 CAMSAP2Q08AD1 1489 aa12.16□□□□□ -0.46
CD164-201ENST00000275080 ADGBQ8N7X0 1667 aa12.16□□□□□ -0.46
CD164-201ENST00000275080 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
CD164-201ENST00000275080 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
CD164-201ENST00000275080 NEFMP07197 916 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms