RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 CDC42BPAQ5VT25 1732 aa29.23■■■□□ 2.27
UBE2F-201ENST00000272930 ZNF644Q9H582 1327 aaPredicted RBP29.22■■■□□ 2.27
UBE2F-201ENST00000272930 ABCC10Q5T3U5 1492 aa29.2■■■□□ 2.26
UBE2F-201ENST00000272930 PLEKHD1A6NEE1 506 aa29.2■■■□□ 2.26
UBE2F-201ENST00000272930 CROCC2H7BZ55 1655 aa29.18■■■□□ 2.26
UBE2F-201ENST00000272930 CFDP1Q9UEE9 299 aaPredicted RBP29.18■■■□□ 2.26
UBE2F-201ENST00000272930 ADGBQ8N7X0 1667 aa29.17■■■□□ 2.26
UBE2F-201ENST00000272930 DENND4BO75064 1496 aaPredicted RBP29.17■■■□□ 2.26
UBE2F-201ENST00000272930 ACIN1Q9UKV3 1341 aaKnown RBP29.16■■■□□ 2.26
UBE2F-201ENST00000272930 MIER1Q8N108 512 aa29.15■■■□□ 2.26
UBE2F-201ENST00000272930 PPP1R15AO75807 674 aaPredicted RBP29.13■■■□□ 2.25
UBE2F-201ENST00000272930 CLASP1Q7Z460 1538 aa29.13■■■□□ 2.25
UBE2F-201ENST00000272930 ERCC6L2Q5T890 1561 aa29.1■■■□□ 2.25
UBE2F-201ENST00000272930 ADGRL2O95490 1459 aa29.1■■■□□ 2.25
UBE2F-201ENST00000272930 TONSLQ96HA7 1378 aa29.09■■■□□ 2.25
UBE2F-201ENST00000272930 TRIM52Q96A61 297 aa29.06■■■□□ 2.24
UBE2F-201ENST00000272930 NCOA1Q15788 1441 aa29.05■■■□□ 2.24
UBE2F-201ENST00000272930 ABCC2Q92887 1545 aa29.04■■■□□ 2.24
UBE2F-201ENST00000272930 MPHOSPH9Q99550 1183 aa29.03■■■□□ 2.24
UBE2F-201ENST00000272930 KDM5BQ9UGL1 1544 aa29.02■■■□□ 2.24
UBE2F-201ENST00000272930 ZNF777Q9ULD5 760 aaPredicted RBP29.01■■■□□ 2.23
UBE2F-201ENST00000272930 SHANK2Q9UPX8 1470 aa29■■■□□ 2.23
UBE2F-201ENST00000272930 PREX2Q70Z35 1606 aa29■■■□□ 2.23
UBE2F-201ENST00000272930 CDC42BPBQ9Y5S2 1711 aa28.99■■■□□ 2.23
UBE2F-201ENST00000272930 CENPBP07199 599 aaPredicted RBP28.96■■■□□ 2.23
UBE2F-201ENST00000272930 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
UBE2F-201ENST00000272930 ANKRD30AQ9BXX3 1397 aa28.94■■■□□ 2.22
UBE2F-201ENST00000272930 SAMD9LQ8IVG5 1584 aa28.91■■■□□ 2.22
UBE2F-201ENST00000272930 UHRF1BP1LA0JNW5 1464 aa28.89■■■□□ 2.22
UBE2F-201ENST00000272930 C9orf84Q5VXU9 1444 aa28.89■■■□□ 2.22
UBE2F-201ENST00000272930 ANKRD30BQ9BXX2 1392 aa28.89■■■□□ 2.22
UBE2F-201ENST00000272930 TTC37Q6PGP7 1564 aa28.88■■■□□ 2.21
UBE2F-201ENST00000272930 PZPP20742 1482 aa28.88■■■□□ 2.21
UBE2F-201ENST00000272930 MBD5Q9P267 1494 aa28.88■■■□□ 2.21
UBE2F-201ENST00000272930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.87■■■□□ 2.212e-6■■■□□ 16.6
UBE2F-201ENST00000272930 ZCCHC11Q5TAX3 1644 aaKnown RBP28.86■■■□□ 2.21
UBE2F-201ENST00000272930 MYO5CQ9NQX4 1742 aa28.84■■■□□ 2.21
UBE2F-201ENST00000272930 ANKRD50Q9ULJ7 1429 aa28.84■■■□□ 2.21
UBE2F-201ENST00000272930 RPRD2Q5VT52 1461 aaKnown RBP28.83■■■□□ 2.21
UBE2F-201ENST00000272930 SCAF1Q9H7N4 1312 aaKnown RBP28.83■■■□□ 2.21
UBE2F-201ENST00000272930 SLC4A1APQ9BWU0 796 aaKnown RBP28.82■■■□□ 2.2
UBE2F-201ENST00000272930 CCDC141Q6ZP82 1450 aa28.81■■■□□ 2.2
UBE2F-201ENST00000272930 FOXD1Q16676 465 aa28.81■■■□□ 2.2
UBE2F-201ENST00000272930 TSPY4P0CV99 314 aa28.78■■■□□ 2.2
UBE2F-201ENST00000272930 TSPY10P0CW01 314 aa28.78■■■□□ 2.2
UBE2F-201ENST00000272930 ARHGAP5Q13017 1502 aa28.76■■■□□ 2.2
UBE2F-201ENST00000272930 HNRNPMP52272 730 aaKnown RBP eCLIP28.76■■■□□ 2.192e-6■■■□□ 16.1
UBE2F-201ENST00000272930 RSPH4AQ5TD94 716 aa28.76■■■□□ 2.19
UBE2F-201ENST00000272930 KDM5DQ9BY66 1539 aa28.75■■■□□ 2.19
UBE2F-201ENST00000272930 MAST1Q9Y2H9 1570 aa28.75■■■□□ 2.19
UBE2F-201ENST00000272930 YTHDC1Q96MU7 727 aaKnown RBP28.74■■■□□ 2.19
UBE2F-201ENST00000272930 TEX14Q8IWB6 1497 aa28.74■■■□□ 2.19
UBE2F-201ENST00000272930 SYCP2Q9BX26 1530 aa28.73■■■□□ 2.19
UBE2F-201ENST00000272930 KIAA1107Q9UPP5 1409 aa28.73■■■□□ 2.19
UBE2F-201ENST00000272930 KIF15Q9NS87 1388 aa28.71■■■□□ 2.19
UBE2F-201ENST00000272930 L3MBTL2Q969R5 705 aa28.7■■■□□ 2.19
UBE2F-201ENST00000272930 PLEKHH2Q8IVE3 1493 aa28.7■■■□□ 2.19
UBE2F-201ENST00000272930 HIRIP3Q9BW71 556 aaPredicted RBP28.68■■■□□ 2.18
UBE2F-201ENST00000272930 DDX10Q13206 875 aaKnown RBP28.67■■■□□ 2.18
UBE2F-201ENST00000272930 PLCH2O75038 1416 aa28.65■■■□□ 2.18
UBE2F-201ENST00000272930 PLXNC1O60486 1568 aa28.63■■■□□ 2.17
UBE2F-201ENST00000272930 NUP155O75694 1391 aa28.62■■■□□ 2.17
UBE2F-201ENST00000272930 PKD2Q13563 968 aa28.61■■■□□ 2.17
UBE2F-201ENST00000272930 KCNH8Q96L42 1107 aa28.61■■■□□ 2.17
UBE2F-201ENST00000272930 ARAP3Q8WWN8 1544 aa28.58■■■□□ 2.17
UBE2F-201ENST00000272930 ARHGEF12Q9NZN5 1544 aa28.57■■■□□ 2.16
UBE2F-201ENST00000272930 ABCC1P33527 1531 aa28.56■■■□□ 2.16
UBE2F-201ENST00000272930 UNC13BO14795 1591 aa28.55■■■□□ 2.16
UBE2F-201ENST00000272930 HSPA5P11021 654 aaKnown RBP28.52■■■□□ 2.16
UBE2F-201ENST00000272930 NBPF8Q3BBV2 869 aa28.52■■■□□ 2.16
UBE2F-201ENST00000272930 WDR7Q9Y4E6 1490 aa28.52■■■□□ 2.16
UBE2F-201ENST00000272930 EIF4G2P78344 907 aaKnown RBP eCLIP28.52■■■□□ 2.16
UBE2F-201ENST00000272930 EFCAB2Q5VUJ9 269 aa28.52■■■□□ 2.16
UBE2F-201ENST00000272930 FAM135AQ9P2D6 1515 aa28.51■■■□□ 2.15
UBE2F-201ENST00000272930 GTF3C3Q9Y5Q9 886 aa28.49■■■□□ 2.15
UBE2F-201ENST00000272930 DUOX2Q9NRD8 1548 aa28.48■■■□□ 2.15
UBE2F-201ENST00000272930 ABCA9Q8IUA7 1624 aa28.46■■■□□ 2.15
UBE2F-201ENST00000272930 IQGAP3Q86VI3 1631 aa28.44■■■□□ 2.14
UBE2F-201ENST00000272930 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
UBE2F-201ENST00000272930 ERBINQ96RT1 1412 aa28.42■■■□□ 2.14
UBE2F-201ENST00000272930 SPATA31E1Q6ZUB1 1445 aa28.42■■■□□ 2.14
UBE2F-201ENST00000272930 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
UBE2F-201ENST00000272930 MAGI2Q86UL8 1455 aa28.41■■■□□ 2.14
UBE2F-201ENST00000272930 TRAPPC8Q9Y2L5 1435 aa28.41■■■□□ 2.14
UBE2F-201ENST00000272930 WASHC2AQ641Q2 1341 aa28.41■■■□□ 2.14
UBE2F-201ENST00000272930 UHRF1BP1Q6BDS2 1440 aa28.39■■■□□ 2.13
UBE2F-201ENST00000272930 ANP32CO43423 234 aa28.38■■■□□ 2.13
UBE2F-201ENST00000272930 CCER2I3L3R5 266 aa28.37■■■□□ 2.13
UBE2F-201ENST00000272930 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
UBE2F-201ENST00000272930 ASXL2Q76L83 1435 aa28.34■■■□□ 2.13
UBE2F-201ENST00000272930 ZFYVE16Q7Z3T8 1539 aa28.34■■■□□ 2.13
UBE2F-201ENST00000272930 FANCAO15360 1455 aa28.32■■■□□ 2.12
UBE2F-201ENST00000272930 RALGAPBQ86X10 1494 aa28.3■■■□□ 2.12
UBE2F-201ENST00000272930 CCDC7Q96M83 1385 aa28.3■■■□□ 2.12
UBE2F-201ENST00000272930 INO80Q9ULG1 1556 aaPredicted RBP28.28■■■□□ 2.12
UBE2F-201ENST00000272930 KDM5CP41229 1560 aa28.27■■■□□ 2.12
UBE2F-201ENST00000272930 SPAG9O60271 1321 aaKnown RBP28.27■■■□□ 2.12
UBE2F-201ENST00000272930 PLA2R1Q13018 1463 aa28.27■■■□□ 2.12
UBE2F-201ENST00000272930 C11orf95C9JLR9 678 aaPredicted RBP28.26■■■□□ 2.12
UBE2F-201ENST00000272930 CNTLNQ9NXG0 1405 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms