RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 SMG6Q86US8 1419 aaKnown RBP23.18■■□□□ 1.3
LRRC56-201ENST00000270115 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
LRRC56-201ENST00000270115 NAIPQ13075 1403 aa23.16■■□□□ 1.3
LRRC56-201ENST00000270115 RRP7BPQ9NSQ0 103 aa23.16■■□□□ 1.3
LRRC56-201ENST00000270115 ZNF608Q9ULD9 1512 aaPredicted RBP23.15■■□□□ 1.3
LRRC56-201ENST00000270115 L3MBTL2Q969R5 705 aa23.14■■□□□ 1.29
LRRC56-201ENST00000270115 CHIC2Q9UKJ5 165 aa23.13■■□□□ 1.29
LRRC56-201ENST00000270115 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
LRRC56-201ENST00000270115 NCOA1Q15788 1441 aa23.12■■□□□ 1.29
LRRC56-201ENST00000270115 RNF123Q5XPI4 1314 aa23.12■■□□□ 1.29
LRRC56-201ENST00000270115 FOXD1Q16676 465 aa23.11■■□□□ 1.29
LRRC56-201ENST00000270115 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
LRRC56-201ENST00000270115 EIF5BO60841 1220 aaKnown RBP23.09■■□□□ 1.29
LRRC56-201ENST00000270115 KIF7Q2M1P5 1343 aa23.09■■□□□ 1.29
LRRC56-201ENST00000270115 FMN1Q68DA7 1419 aa23.09■■□□□ 1.29
LRRC56-201ENST00000270115 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.29
LRRC56-201ENST00000270115 USP35Q9P2H5 1018 aa23.08■■□□□ 1.29
LRRC56-201ENST00000270115 WDR62O43379 1518 aa23.07■■□□□ 1.28
LRRC56-201ENST00000270115 PDE4AP27815 886 aa23.06■■□□□ 1.28
LRRC56-201ENST00000270115 UBE2Q2Q8WVN8 375 aa23.06■■□□□ 1.28
LRRC56-201ENST00000270115 WASHC2CQ9Y4E1 1318 aa23.06■■□□□ 1.28
LRRC56-201ENST00000270115 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
LRRC56-201ENST00000270115 FYCO1Q9BQS8 1478 aa23.04■■□□□ 1.28
LRRC56-201ENST00000270115 NBPF8Q3BBV2 869 aa23.04■■□□□ 1.28
LRRC56-201ENST00000270115 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
LRRC56-201ENST00000270115 EXOC6Q8TAG9 804 aa23.02■■□□□ 1.28
LRRC56-201ENST00000270115 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
LRRC56-201ENST00000270115 PPM1GO15355 546 aaPredicted RBP23.01■■□□□ 1.27
LRRC56-201ENST00000270115 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
LRRC56-201ENST00000270115 TCERG1O14776 1098 aaKnown RBP23■■□□□ 1.27
LRRC56-201ENST00000270115 GRIN2BQ13224 1484 aa23■■□□□ 1.27
LRRC56-201ENST00000270115 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
LRRC56-201ENST00000270115 BACH2Q9BYV9 841 aa22.98■■□□□ 1.27
LRRC56-201ENST00000270115 MPHOSPH9Q99550 1183 aa22.98■■□□□ 1.27
LRRC56-201ENST00000270115 FBLN2P98095 1184 aa22.97■■□□□ 1.27
LRRC56-201ENST00000270115 GSE1Q14687 1217 aa22.96■■□□□ 1.27
LRRC56-201ENST00000270115 EFCAB5A4FU69 1503 aa22.96■■□□□ 1.27
LRRC56-201ENST00000270115 THOC2Q8NI27 1593 aaKnown RBP22.94■■□□□ 1.26
LRRC56-201ENST00000270115 ARID3CA6NKF2 412 aa22.94■■□□□ 1.26
LRRC56-201ENST00000270115 SKAP1Q86WV1 359 aa22.93■■□□□ 1.26
LRRC56-201ENST00000270115 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
LRRC56-201ENST00000270115 RRP1P56182 461 aaKnown RBP22.92■■□□□ 1.26
LRRC56-201ENST00000270115 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
LRRC56-201ENST00000270115 SLC4A3P48751 1232 aa22.92■■□□□ 1.26
LRRC56-201ENST00000270115 TMC1Q8TDI8 760 aa22.92■■□□□ 1.26
LRRC56-201ENST00000270115 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
LRRC56-201ENST00000270115 PNISRQ8TF01 805 aaKnown RBP22.89■■□□□ 1.26
LRRC56-201ENST00000270115 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.26
LRRC56-201ENST00000270115 FRAT1Q92837 279 aaPredicted RBP22.89■■□□□ 1.25
LRRC56-201ENST00000270115 NFKBIBQ15653 356 aa22.88■■□□□ 1.25
LRRC56-201ENST00000270115 EIF4G3O43432 1585 aaKnown RBP22.87■■□□□ 1.25
LRRC56-201ENST00000270115 SAMD9Q5K651 1589 aa22.87■■□□□ 1.25
LRRC56-201ENST00000270115 KDM6BO15054 1643 aa22.86■■□□□ 1.25
LRRC56-201ENST00000270115 SPATA31E1Q6ZUB1 1445 aa22.86■■□□□ 1.25
LRRC56-201ENST00000270115 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
LRRC56-201ENST00000270115 RCAN3Q9UKA8 241 aa22.84■■□□□ 1.25
LRRC56-201ENST00000270115 MS4A1P11836 297 aa22.84■■□□□ 1.25
LRRC56-201ENST00000270115 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
LRRC56-201ENST00000270115 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
LRRC56-201ENST00000270115 DDRGK1Q96HY6 314 aa22.81■■□□□ 1.24
LRRC56-201ENST00000270115 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
LRRC56-201ENST00000270115 PLIN1O60240 522 aa22.78■■□□□ 1.24
LRRC56-201ENST00000270115 DAXXQ9UER7 740 aaPredicted RBP22.78■■□□□ 1.24
LRRC56-201ENST00000270115 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
LRRC56-201ENST00000270115 ANKRD30BQ9BXX2 1392 aa22.75■■□□□ 1.23
LRRC56-201ENST00000270115 RPRD2Q5VT52 1461 aaKnown RBP22.73■■□□□ 1.23
LRRC56-201ENST00000270115 TEX14Q8IWB6 1497 aa22.73■■□□□ 1.23
LRRC56-201ENST00000270115 LRRIQ1Q96JM4 1722 aa22.73■■□□□ 1.23
LRRC56-201ENST00000270115 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
LRRC56-201ENST00000270115 SUPT6HQ7KZ85 1726 aaKnown RBP22.72■■□□□ 1.23
LRRC56-201ENST00000270115 POLR1AO95602 1720 aaPredicted RBP22.71■■□□□ 1.23
LRRC56-201ENST00000270115 USP47Q96K76 1375 aa22.7■■□□□ 1.23
LRRC56-201ENST00000270115 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.22
LRRC56-201ENST00000270115 GCC2Q8IWJ2 1684 aa22.7■■□□□ 1.22
LRRC56-201ENST00000270115 CDCA7LQ96GN5 454 aa22.7■■□□□ 1.22
LRRC56-201ENST00000270115 FRAT2O75474 233 aaPredicted RBP22.69■■□□□ 1.22
LRRC56-201ENST00000270115 CRBNQ96SW2 442 aa22.67■■□□□ 1.22
LRRC56-201ENST00000270115 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
LRRC56-201ENST00000270115 DCAF11Q8TEB1 546 aa22.67■■□□□ 1.22
LRRC56-201ENST00000270115 BCORL1Q5H9F3 1711 aa22.67■■□□□ 1.22
LRRC56-201ENST00000270115 MAGI3Q5TCQ9 1506 aa22.66■■□□□ 1.22
LRRC56-201ENST00000270115 UGGT2Q9NYU1 1516 aa22.66■■□□□ 1.22
LRRC56-201ENST00000270115 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
LRRC56-201ENST00000270115 LRPPRCP42704 1394 aaKnown RBP22.65■■□□□ 1.22
LRRC56-201ENST00000270115 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
LRRC56-201ENST00000270115 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
LRRC56-201ENST00000270115 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
LRRC56-201ENST00000270115 EHBP1L1Q8N3D4 1523 aa22.64■■□□□ 1.21
LRRC56-201ENST00000270115 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
LRRC56-201ENST00000270115 CDK13Q14004 1512 aaKnown RBP22.61■■□□□ 1.21
LRRC56-201ENST00000270115 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
LRRC56-201ENST00000270115 FAM43AQ8N2R8 423 aa22.61■■□□□ 1.21
LRRC56-201ENST00000270115 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
LRRC56-201ENST00000270115 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
LRRC56-201ENST00000270115 TCOF1Q13428 1488 aaKnown RBP22.59■■□□□ 1.21
LRRC56-201ENST00000270115 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.21
LRRC56-201ENST00000270115 EPRSP07814 1512 aaKnown RBP22.58■■□□□ 1.2
LRRC56-201ENST00000270115 C20orf194Q5TEA3 1177 aa22.57■■□□□ 1.2
LRRC56-201ENST00000270115 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
LRRC56-201ENST00000270115 PDE3BQ13370 1112 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms