RNA–Protein interactions for RNA: ENST00000268057.8

BBS4-201, Transcript of Bardet-Biedl syndrome 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBS4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-201ENST00000268057 ARAP3Q8WWN8 1544 aa12.15□□□□□ -0.46
BBS4-201ENST00000268057 KCNA4P22459 653 aa12.15□□□□□ -0.46
BBS4-201ENST00000268057 PTPRMP28827 1452 aa12.13□□□□□ -0.47
BBS4-201ENST00000268057 FMN1Q68DA7 1419 aa12.13□□□□□ -0.47
BBS4-201ENST00000268057 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
BBS4-201ENST00000268057 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
BBS4-201ENST00000268057 ZCCHC11Q5TAX3 1644 aaKnown RBP12.11□□□□□ -0.47
BBS4-201ENST00000268057 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
BBS4-201ENST00000268057 SPATA31D1Q6ZQQ2 1576 aa12.1□□□□□ -0.47
BBS4-201ENST00000268057 SUPT16HQ9Y5B9 1047 aaKnown RBP12.1□□□□□ -0.47
BBS4-201ENST00000268057 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
BBS4-201ENST00000268057 IQGAP2Q13576 1575 aa12.09□□□□□ -0.47
BBS4-201ENST00000268057 BCORL1Q5H9F3 1711 aa12.08□□□□□ -0.48
BBS4-201ENST00000268057 DISP3Q9P2K9 1392 aa12.08□□□□□ -0.48
BBS4-201ENST00000268057 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
BBS4-201ENST00000268057 HFM1A2PYH4 1435 aa12.08□□□□□ -0.48
BBS4-201ENST00000268057 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
BBS4-201ENST00000268057 UGGT2Q9NYU1 1516 aa12.06□□□□□ -0.48
BBS4-201ENST00000268057 CD109Q6YHK3 1445 aa12.06□□□□□ -0.48
BBS4-201ENST00000268057 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
BBS4-201ENST00000268057 AKNAQ7Z591 1439 aa12.05□□□□□ -0.48
BBS4-201ENST00000268057 EHBP1L1Q8N3D4 1523 aa12.05□□□□□ -0.48
BBS4-201ENST00000268057 PTPN23Q9H3S7 1636 aa12.03□□□□□ -0.48
BBS4-201ENST00000268057 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
BBS4-201ENST00000268057 PPP1R15AO75807 674 aaPredicted RBP12.03□□□□□ -0.48
BBS4-201ENST00000268057 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
BBS4-201ENST00000268057 SUPT6HQ7KZ85 1726 aaKnown RBP12.02□□□□□ -0.49
BBS4-201ENST00000268057 NEO1Q92859 1461 aa12.01□□□□□ -0.49
BBS4-201ENST00000268057 CCDC18Q5T9S5 1454 aa12.01□□□□□ -0.49
BBS4-201ENST00000268057 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
BBS4-201ENST00000268057 DISP1Q96F81 1524 aa12□□□□□ -0.49
BBS4-201ENST00000268057 GCC2Q8IWJ2 1684 aa12□□□□□ -0.49
BBS4-201ENST00000268057 MYOM3Q5VTT5 1437 aa12□□□□□ -0.49
BBS4-201ENST00000268057 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
BBS4-201ENST00000268057 LRRIQ1Q96JM4 1722 aa11.99□□□□□ -0.49
BBS4-201ENST00000268057 HECW1Q76N89 1606 aa11.98□□□□□ -0.49
BBS4-201ENST00000268057 ILDR2Q71H61 639 aa11.98□□□□□ -0.49
BBS4-201ENST00000268057 KIAA0556O60303 1618 aa11.98□□□□□ -0.49
BBS4-201ENST00000268057 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
BBS4-201ENST00000268057 NAIPQ13075 1403 aa11.97□□□□□ -0.49
BBS4-201ENST00000268057 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
BBS4-201ENST00000268057 ARHGEF40Q8TER5 1519 aa11.95□□□□□ -0.5
BBS4-201ENST00000268057 FAM50AQ14320 339 aaKnown RBP11.95□□□□□ -0.5
BBS4-201ENST00000268057 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
BBS4-201ENST00000268057 ABCA8O94911 1581 aa11.94□□□□□ -0.5
BBS4-201ENST00000268057 ITGAEP38570 1179 aa11.94□□□□□ -0.5
BBS4-201ENST00000268057 FANCAO15360 1455 aa11.93□□□□□ -0.5
BBS4-201ENST00000268057 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
BBS4-201ENST00000268057 CFAP74Q9C0B2 1584 aa11.93□□□□□ -0.5
BBS4-201ENST00000268057 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
BBS4-201ENST00000268057 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
BBS4-201ENST00000268057 PTPRTO14522 1441 aa11.92□□□□□ -0.5
BBS4-201ENST00000268057 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
BBS4-201ENST00000268057 MIA2Q96PC5 1412 aa11.92□□□□□ -0.5
BBS4-201ENST00000268057 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
BBS4-201ENST00000268057 PREX1Q8TCU6 1659 aa11.92□□□□□ -0.5
BBS4-201ENST00000268057 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
BBS4-201ENST00000268057 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
BBS4-201ENST00000268057 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
BBS4-201ENST00000268057 YEATS2Q9ULM3 1422 aa11.9□□□□□ -0.51
BBS4-201ENST00000268057 ANP32CO43423 234 aa11.89□□□□□ -0.51
BBS4-201ENST00000268057 ZMYM4Q5VZL5 1548 aa11.89□□□□□ -0.51
BBS4-201ENST00000268057 DDX10Q13206 875 aaKnown RBP11.88□□□□□ -0.51
BBS4-201ENST00000268057 FRMPD1Q5SYB0 1578 aa11.86□□□□□ -0.51
BBS4-201ENST00000268057 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
BBS4-201ENST00000268057 DENND4BO75064 1496 aaPredicted RBP11.85□□□□□ -0.51
BBS4-201ENST00000268057 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
BBS4-201ENST00000268057 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
BBS4-201ENST00000268057 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
BBS4-201ENST00000268057 FER1L4A9Z1Z3 1794 aa11.83□□□□□ -0.52
BBS4-201ENST00000268057 NEFLP07196 543 aa11.82□□□□□ -0.52
BBS4-201ENST00000268057 RICTORQ6R327 1708 aa11.82□□□□□ -0.52
BBS4-201ENST00000268057 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
BBS4-201ENST00000268057 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
BBS4-201ENST00000268057 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
BBS4-201ENST00000268057 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
BBS4-201ENST00000268057 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
BBS4-201ENST00000268057 DNMT1P26358 1616 aaKnown RBP11.8□□□□□ -0.52
BBS4-201ENST00000268057 ARHGEF12Q9NZN5 1544 aa11.8□□□□□ -0.52
BBS4-201ENST00000268057 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
BBS4-201ENST00000268057 NCBP3Q53F19 620 aaKnown RBP11.79□□□□□ -0.52
BBS4-201ENST00000268057 CNTLNQ9NXG0 1405 aa11.79□□□□□ -0.52
BBS4-201ENST00000268057 STRCQ7RTU9 1775 aa11.78□□□□□ -0.52
BBS4-201ENST00000268057 RPRD2Q5VT52 1461 aaKnown RBP11.78□□□□□ -0.52
BBS4-201ENST00000268057 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
BBS4-201ENST00000268057 FKBP8Q14318 412 aa11.78□□□□□ -0.52
BBS4-201ENST00000268057 LTBP4Q8N2S1 1624 aa11.77□□□□□ -0.53
BBS4-201ENST00000268057 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
BBS4-201ENST00000268057 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
BBS4-201ENST00000268057 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
BBS4-201ENST00000268057 PIAS4Q8N2W9 510 aaPredicted RBP11.74□□□□□ -0.53
BBS4-201ENST00000268057 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
BBS4-201ENST00000268057 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
BBS4-201ENST00000268057 DAPK1P53355 1430 aa11.73□□□□□ -0.53
BBS4-201ENST00000268057 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
BBS4-201ENST00000268057 HSPA2P54652 639 aa11.73□□□□□ -0.53
BBS4-201ENST00000268057 ATP10BO94823 1461 aa11.73□□□□□ -0.53
BBS4-201ENST00000268057 WASHC2AQ641Q2 1341 aa11.72□□□□□ -0.53
BBS4-201ENST00000268057 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
BBS4-201ENST00000268057 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms