RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
PRPF6-201ENST00000266079 DNAJC5Q9H3Z4 198 aa18.51■□□□□ 0.55
PRPF6-201ENST00000266079 ABCC10Q5T3U5 1492 aa18.5■□□□□ 0.55
PRPF6-201ENST00000266079 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
PRPF6-201ENST00000266079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.5■□□□□ 0.557e-11■□□□□ 10.5
PRPF6-201ENST00000266079 HNRNPMP52272 730 aaKnown RBP eCLIP18.48■□□□□ 0.554e-8■■■■■ 35.2
PRPF6-201ENST00000266079 PTPN23Q9H3S7 1636 aa18.47■□□□□ 0.55
PRPF6-201ENST00000266079 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.55
PRPF6-201ENST00000266079 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
PRPF6-201ENST00000266079 RRP7BPQ9NSQ0 103 aa18.44■□□□□ 0.54
PRPF6-201ENST00000266079 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
PRPF6-201ENST00000266079 PTPRKQ15262 1439 aa18.43■□□□□ 0.54
PRPF6-201ENST00000266079 MIA2Q96PC5 1412 aa18.43■□□□□ 0.54
PRPF6-201ENST00000266079 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
PRPF6-201ENST00000266079 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
PRPF6-201ENST00000266079 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
PRPF6-201ENST00000266079 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
PRPF6-201ENST00000266079 PLCH2O75038 1416 aa18.38■□□□□ 0.53
PRPF6-201ENST00000266079 CD109Q6YHK3 1445 aa18.38■□□□□ 0.53
PRPF6-201ENST00000266079 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
PRPF6-201ENST00000266079 MIER1Q8N108 512 aa18.36■□□□□ 0.53
PRPF6-201ENST00000266079 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
PRPF6-201ENST00000266079 MYT1LQ9UL68 1186 aa18.35■□□□□ 0.53
PRPF6-201ENST00000266079 PREX2Q70Z35 1606 aa18.35■□□□□ 0.53
PRPF6-201ENST00000266079 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
PRPF6-201ENST00000266079 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
PRPF6-201ENST00000266079 ABCC5O15440 1437 aa18.34■□□□□ 0.53
PRPF6-201ENST00000266079 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
PRPF6-201ENST00000266079 AFAP1Q8N556 730 aa18.34■□□□□ 0.53
PRPF6-201ENST00000266079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRPF6-201ENST00000266079 DAPK1P53355 1430 aa18.34■□□□□ 0.53
PRPF6-201ENST00000266079 FANCAO15360 1455 aa18.33■□□□□ 0.52
PRPF6-201ENST00000266079 TSPY4P0CV99 314 aa18.33■□□□□ 0.52
PRPF6-201ENST00000266079 TSPY10P0CW01 314 aa18.33■□□□□ 0.52
PRPF6-201ENST00000266079 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.52
PRPF6-201ENST00000266079 SYCP2Q9BX26 1530 aa18.32■□□□□ 0.52
PRPF6-201ENST00000266079 ABCA9Q8IUA7 1624 aa18.31■□□□□ 0.52
PRPF6-201ENST00000266079 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
PRPF6-201ENST00000266079 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
PRPF6-201ENST00000266079 TSPOAP1O95153 1857 aa18.27■□□□□ 0.52
PRPF6-201ENST00000266079 SCAPERQ9BY12 1400 aa18.27■□□□□ 0.51
PRPF6-201ENST00000266079 TRAPPC8Q9Y2L5 1435 aa18.27■□□□□ 0.51
PRPF6-201ENST00000266079 RAPGEF3O95398 923 aa18.27■□□□□ 0.51
PRPF6-201ENST00000266079 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
PRPF6-201ENST00000266079 SETD5Q9C0A6 1442 aa18.26■□□□□ 0.51
PRPF6-201ENST00000266079 ADGRL1O94910 1474 aa18.25■□□□□ 0.51
PRPF6-201ENST00000266079 DNMT1P26358 1616 aaKnown RBP18.25■□□□□ 0.51
PRPF6-201ENST00000266079 DIP2BQ9P265 1576 aa18.25■□□□□ 0.51
PRPF6-201ENST00000266079 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
PRPF6-201ENST00000266079 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
PRPF6-201ENST00000266079 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
PRPF6-201ENST00000266079 NAIPQ13075 1403 aa18.23■□□□□ 0.51
PRPF6-201ENST00000266079 CCDC141Q6ZP82 1450 aa18.22■□□□□ 0.51
PRPF6-201ENST00000266079 SPAG9O60271 1321 aaKnown RBP18.21■□□□□ 0.51
PRPF6-201ENST00000266079 HFM1A2PYH4 1435 aa18.2■□□□□ 0.5
PRPF6-201ENST00000266079 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
PRPF6-201ENST00000266079 ABCC1P33527 1531 aa18.2■□□□□ 0.5
PRPF6-201ENST00000266079 ANKRD30AQ9BXX3 1397 aa18.19■□□□□ 0.5
PRPF6-201ENST00000266079 NCOA1Q15788 1441 aa18.19■□□□□ 0.5
PRPF6-201ENST00000266079 KIAA1107Q9UPP5 1409 aa18.19■□□□□ 0.5
PRPF6-201ENST00000266079 PLEKHH2Q8IVE3 1493 aa18.19■□□□□ 0.5
PRPF6-201ENST00000266079 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
PRPF6-201ENST00000266079 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
PRPF6-201ENST00000266079 KDM6BO15054 1643 aa18.16■□□□□ 0.5
PRPF6-201ENST00000266079 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
PRPF6-201ENST00000266079 ARAP3Q8WWN8 1544 aa18.16■□□□□ 0.5
PRPF6-201ENST00000266079 GLI2P10070 1586 aa18.14■□□□□ 0.49
PRPF6-201ENST00000266079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.497e-13■■■■□ 19.8
PRPF6-201ENST00000266079 KIF13AQ9H1H9 1805 aa18.14■□□□□ 0.49
PRPF6-201ENST00000266079 ARHGEF5Q12774 1597 aa18.14■□□□□ 0.49
PRPF6-201ENST00000266079 ROCK1Q13464 1354 aa18.13■□□□□ 0.49
PRPF6-201ENST00000266079 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
PRPF6-201ENST00000266079 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
PRPF6-201ENST00000266079 ANKRD50Q9ULJ7 1429 aa18.11■□□□□ 0.49
PRPF6-201ENST00000266079 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
PRPF6-201ENST00000266079 FOXD1Q16676 465 aa18.11■□□□□ 0.49
PRPF6-201ENST00000266079 DENND4BO75064 1496 aaPredicted RBP18.1■□□□□ 0.49
PRPF6-201ENST00000266079 SHANK2Q9UPX8 1470 aa18.1■□□□□ 0.49
PRPF6-201ENST00000266079 NEO1Q92859 1461 aa18.09■□□□□ 0.49
PRPF6-201ENST00000266079 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.49
PRPF6-201ENST00000266079 ANP32EQ9BTT0 268 aa18.08■□□□□ 0.49
PRPF6-201ENST00000266079 ADGRL2O95490 1459 aa18.08■□□□□ 0.48
PRPF6-201ENST00000266079 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
PRPF6-201ENST00000266079 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
PRPF6-201ENST00000266079 ADGBQ8N7X0 1667 aa18.06■□□□□ 0.48
PRPF6-201ENST00000266079 TEX14Q8IWB6 1497 aa18.05■□□□□ 0.48
PRPF6-201ENST00000266079 COL17A1Q9UMD9 1497 aaPredicted RBP18.05■□□□□ 0.48
PRPF6-201ENST00000266079 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
PRPF6-201ENST00000266079 CFAP74Q9C0B2 1584 aa18.04■□□□□ 0.48
PRPF6-201ENST00000266079 GCC2Q8IWJ2 1684 aa18.04■□□□□ 0.48
PRPF6-201ENST00000266079 KIF3BO15066 747 aa18.04■□□□□ 0.48
PRPF6-201ENST00000266079 TSHZ2Q9NRE2 1034 aa18.04■□□□□ 0.48
PRPF6-201ENST00000266079 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
PRPF6-201ENST00000266079 ZFYVE16Q7Z3T8 1539 aa18.04■□□□□ 0.48
PRPF6-201ENST00000266079 NUP155O75694 1391 aa18.03■□□□□ 0.48
PRPF6-201ENST00000266079 SIN3AQ96ST3 1273 aa18.03■□□□□ 0.48
PRPF6-201ENST00000266079 MPHOSPH9Q99550 1183 aa18.02■□□□□ 0.48
PRPF6-201ENST00000266079 YEATS2Q9ULM3 1422 aa18.02■□□□□ 0.47
PRPF6-201ENST00000266079 GGT6Q6P531 493 aa18■□□□□ 0.47
PRPF6-201ENST00000266079 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms